Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g01022 ATGGCCATCTCCATTGCCTTCTCGACGAACACCCACTTCCCATTTTCTACAATTTGCAGATCAATTTCCTCTCTCAGTCCATCCGTCGATGTTCTTTTTAACGCCAGGAGAGATTGCAATCGTGGGTTTCCTCTAATTAGAACATTGGACACCAAATTGGCAAAAACCAGGGCTGCATTGTCTGAAAATTCTTACCGCAAGCAGTACTCAAAAGTGGGTGCCAAATCTATTGGACCCATTCCACCTGCCCAGCTAATTCAAGTCGTTGAGAATGCTGCCAAGACAGGAGCCGAGGTGGTGATGGATGCTGTTAATAAGCCTCGGAATATTGAATATAAAGGATTGGCGGACTTAGTAACGGAAACAGATAAAATGAGTGAGGCTGCTATTCTGGAAGTCGTTAGAAAGAACTTTAGAGATCACCTCATCCTTGGAGAAGAGGGAGGAGTTATAGGGGATTCATCATCTGATTATCTTTGGTGCATTGATCCTTTAGATGGAACAACAAATTTTGCACATGGCTATCCTTCCTTTGCAGTATCTGTCGGAGTTTTATTTCGGGGAAATCCTGCTGCTGCAGCTGTGCTAAAAAAATGTGTCCTATGCAACTCTAACAATGAGCTGGTGCAGAGAGTGGGTCGAAACTCCCACGGAACAAGCAAGAATAAAGCAAGCACGTTGACATGCATCAAGCAAGTAGAGTTTGTTGGGGGTCCTATGTGCTGGAACACTCGCATATTTACTGCAACTGCTGGTGGGGGAGCATTCTGTAATGGCCAAAAGATTAATGTGAGTCAAACTAGCCAGGTGGAACGATCTCTTCTAGTTACAGGATTTGGATACGAACATGATGATCCATGGGCTACAAATATGGATTTATTTAAAGAATTCACAGATGTCAGCAGGGGAGTAAGAAGGCTCGGTGCAGCAGCAGTCGACATGAGCCATGTAGCTCTAGGAATTGTAGAAGCATATTGGGAGTATCGCCTGAAGCCATGGGATATGGCTGCAGGTGTTTTGATAGTTGAAGAAGCAGGTGGAGCAGTGACTCGCATGGATGGTGGAAAGTTCAGTGTCTTTGATAGATCTGTTTTGGTTTCTAATGGTGTTGTACATGACAAGCTTTTGGAGAAAATTGGTTGTGCAACCGAAAAACTAAAAAGCAAAGGAATTGATTTCTCATTGTGGTATAAACCAGAAAACTACCAGACAGATCTTTGA 1221 43.57 MAISIAFSTNTHFPFSTICRSISSLSPSVDVLFNARRDCNRGFPLIRTLDTKLAKTRAALSENSYRKQYSKVGAKSIGPIPPAQLIQVVENAAKTGAEVVMDAVNKPRNIEYKGLADLVTETDKMSEAAILEVVRKNFRDHLILGEEGGVIGDSSSDYLWCIDPLDGTTNFAHGYPSFAVSVGVLFRGNPAAAAVLKKCVLCNSNNELVQRVGRNSHGTSKNKASTLTCIKQVEFVGGPMCWNTRIFTATAGGGAFCNGQKINVSQTSQVERSLLVTGFGYEHDDPWATNMDLFKEFTDVSRGVRRLGAAAVDMSHVALGIVEAYWEYRLKPWDMAAGVLIVEEAGGAVTRMDGGKFSVFDRSVLVSNGVVHDKLLEKIGCATEKLKSKGIDFSLWYKPENYQTDL 406
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 15649121 15657403 - ClCG01G010320.1 Cla01g01022 264611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g01022 406 Gene3D - 263 386 - -
Cla01g01022 406 CDD IMPase 85 368 IPR033942 GO:0008934|GO:0046855
Cla01g01022 406 ProSitePatterns Inositol monophosphatase family signature 1. 160 173 IPR020583 -
Cla01g01022 406 ProSitePatterns Inositol monophosphatase family signature 2. 333 347 IPR020550 GO:0046854
Cla01g01022 406 PRINTS Inositol monophosphatase superfamily signature 299 320 IPR000760 GO:0046855
Cla01g01022 406 PRINTS Inositol monophosphatase superfamily signature 330 354 IPR000760 GO:0046855
Cla01g01022 406 PRINTS Inositol monophosphatase superfamily signature 117 137 IPR000760 GO:0046855
Cla01g01022 406 PRINTS Inositol monophosphatase superfamily signature 160 176 IPR000760 GO:0046855
Cla01g01022 406 PRINTS Inositol monophosphatase superfamily signature 139 155 IPR000760 GO:0046855
Cla01g01022 406 PANTHER PHOSPHATASE IMPL1, CHLOROPLASTIC 51 213 - -
Cla01g01022 406 PANTHER PHOSPHATASE IMPL1, CHLOROPLASTIC 233 404 - -
Cla01g01022 406 PANTHER INOSITOL MONOPHOSPHATASE 51 213 - -
Cla01g01022 406 PANTHER INOSITOL MONOPHOSPHATASE 233 404 - -
Cla01g01022 406 Gene3D - 82 262 - -
Cla01g01022 406 Pfam Inositol monophosphatase family 85 379 IPR000760 GO:0046855
Cla01g01022 406 SUPERFAMILY Carbohydrate phosphatase 84 379 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01022 Cla-Chr1:15649121 Cla01g01044 Cla-Chr1:16156946 5.37E-35 dispersed
Cla01g01022 Cla-Chr1:15649121 Cla01g02093 Cla-Chr1:35257515 5.68E-28 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g01022 K01092 - csv:101218450 673.7