Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla01g01115 | ATGAAGATGGAACTTTCTTCCTCTAAATCCATTCAAGAAGATATAATTCTCTGGATGGAAGACCAAAAGATAGGAGTGGGCTTGATAATCTCTTTGTTAGTTCTGATGGCCTCAAAGAGTTCGAAGCCTTCTGTAAAGCAACCTAAGGGGATAATTGGCGTTCAAGCTACGGATTCAGGTGATCTAAAGTCCTTACCTTCACAGACTTCATTGGGAAACAAAATTGGTTCTGTTATCTCTGGAGATGTATTGAACTCTACACAGAAATCCTTGAATCAGTCTACTTTGATTGATTCATCAAAGAGCAAATCCTCAAGTTTAAATCCAAAAGAGTCTACCGAGTCTTGTAATCAGAAAGTCAAAGAAAATTCCTCAAAGTCTGGCTCTAAGACCTTGACAGAAGGAGATCCTGCTCTTAGCGGGACTCGGGGCTTAGCAGAGGACTCTATAGATCCTGAGAAGAAAACATCGGAATGTGGGAGTGGGAAGGATAGTTCTGTTTCTGCCAAAGTCAGTGATGGAACAAACAGTATTGCCAAGACTAGTGGAAGTGCGAAAATTAGCGACCGTGTTGAGATGGTTGAGAGTGGCAAGAGCAGCATGTGTCGAGGAAGCACTAGCAGCGACATCAGTGACGAAAGCACCTGTAGCAGCTTTAGTAGTAGTATCAGTAAGCCTCACAAAGCAAATGACTTGAGATGGGAGGCCATCCAAGCTGTACGTGCAAGGGATGGGATATTGGGATTAGGTCATTTTAGACTATTGAAGAGACTGGGATGTGGGGATATCGGAAGCGTCTACTTGTCGGAGTTGAGTGGTACTAAATGTTATTTTGCTATGAAGGTCATGGACAAAGGGTCTCTAGCAAGCCGAAAGAAGTTGCTTCGAGCTCAGACTGAAAGAGAAATATTGCAGTCTCTTGATCATCCATTCCTTCCTACATTATATACTCATTTTGAGACTGATAAGTTCTCATGCTTGGTGATGGAGTTCTGCCCTGGGGGAGACTTGCACACTCTAAGGCAGAGGCAGCCAGGGAAGCATTTTCCCGAGCAGGCGGTGAAATTTTATGTAGCAGAGGTTCTCCTAGCACTTGAGTATCTTCACATGCTTGGGATTGTATACCGGGACCTTAAGCCTGAGAATGTTCTTGTGAGGGAAGATGGACACATAATGCTTTCGGACTTTGATCTTTCATTAAGATGTGCAGTTAGTCCAACATTAGTGAAGGGTTCATGTTCTGAGTCTGAACCCTTGAGAAAGAATTCAGCTTATTGTGTTCAACCGGCTTGTATCGAACCTTCCTGCATCCAGCCATCCTGTGTAGTTCCTACGACATGCTTCTCTCCCCGACTTTTCTCTAGCAAATCAAAGAAGGATAGAAAACCCAAGACTGAAATAGGAAACCAGGTAACACCATTGCCAGAGCTCATTGCAGAGCCTACGGAGGCGAGATCAATGTCATTTGTTGGTACACACGAGTATTTGGCACCGGAGATCATTAAAGGCGAAGGTCATGGAAGTGCTGTTGACTGGTGGACTTTTGGAATCTTTCTATACGAACTGTTGTTTGGTAAAACTCCTTTTAAGGGATCTGGGAATCGAGCCACGTTGTTCAACGTTGTTGGTCAGCCTTTGCGGTTTCCTGAATCACCAGTTGTCAGTTTTGCTGCAAGGGATCTCATCAGGGGATTGCTTGTCAAGGAACCACAACATAGATTAGCTTACAAACGAGGGGCAACTGAGATCAAGCAACATCCCTTCTTTGAAGGTGTCAACTGGGCATTGATACGTTGCGCTTCGCCACCAGAAGTACCAAAGCCTGTTGAGATTGAGAGGATACCCTCACCAGCACCTCCAGCGAGTGGAAAAGCTGTAATGGCTAGACCTGGTCCCGATTCCAAATCGTCTGATAATTATCTCGAGTTTGATTTCTTTTAG | 1941 | 44.36 | MKMELSSSKSIQEDIILWMEDQKIGVGLIISLLVLMASKSSKPSVKQPKGIIGVQATDSGDLKSLPSQTSLGNKIGSVISGDVLNSTQKSLNQSTLIDSSKSKSSSLNPKESTESCNQKVKENSSKSGSKTLTEGDPALSGTRGLAEDSIDPEKKTSECGSGKDSSVSAKVSDGTNSIAKTSGSAKISDRVEMVESGKSSMCRGSTSSDISDESTCSSFSSSISKPHKANDLRWEAIQAVRARDGILGLGHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKHFPEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVKGSCSESEPLRKNSAYCVQPACIEPSCIQPSCVVPTTCFSPRLFSSKSKKDRKPKTEIGNQVTPLPELIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCASPPEVPKPVEIERIPSPAPPASGKAVMARPGPDSKSSDNYLEFDFF | 646 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 18346000 | 18349586 | - | ClCG01G011290.2 | Cla01g01115 | 264704 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla01g01115 | 646 | MobiDBLite | consensus disorder prediction | 614 | 639 | - | - | |
Cla01g01115 | 646 | SMART | serkin_6 | 252 | 589 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla01g01115 | 646 | Gene3D | Transferase(Phosphotransferase) domain 1 | 336 | 404 | - | - | |
Cla01g01115 | 646 | PANTHER | SERINE/THREONINE KINASE FAMILY PROTEIN | 38 | 646 | - | - | |
Cla01g01115 | 646 | PANTHER | FLIPPASE KINASE 1-RELATED | 38 | 646 | - | - | |
Cla01g01115 | 646 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 373 | 385 | IPR008271 | GO:0004672|GO:0006468 | |
Cla01g01115 | 646 | CDD | STKc_phototropin_like | 251 | 612 | - | - | |
Cla01g01115 | 646 | Gene3D | Phosphorylase Kinase; domain 1 | 250 | 335 | - | - | |
Cla01g01115 | 646 | MobiDBLite | consensus disorder prediction | 92 | 136 | - | - | |
Cla01g01115 | 646 | MobiDBLite | consensus disorder prediction | 92 | 209 | - | - | |
Cla01g01115 | 646 | Gene3D | Transferase(Phosphotransferase) domain 1 | 483 | 607 | - | - | |
Cla01g01115 | 646 | ProSiteProfiles | Protein kinase domain profile. | 252 | 589 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla01g01115 | 646 | Pfam | Protein kinase domain | 486 | 589 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla01g01115 | 646 | Pfam | Protein kinase domain | 253 | 403 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla01g01115 | 646 | MobiDBLite | consensus disorder prediction | 161 | 184 | - | - | |
Cla01g01115 | 646 | SUPERFAMILY | Protein kinase-like (PK-like) | 228 | 617 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g01115 | Cla-Chr1:18346000 | Cla04g00971 | Cla-Chr4:24841948 | 0 | dispersed | |
Cla02g02141 | Cla-Chr2:36474301 | Cla01g01115 | Cla-Chr1:18346000 | 1.76E-36 | dispersed | |
Cla03g00601 | Cla-Chr3:7033181 | Cla01g01115 | Cla-Chr1:18346000 | 1.40E-134 | transposed | |
Cla05g00012 | Cla-Chr5:159566 | Cla01g01115 | Cla-Chr1:18346000 | 0 | transposed | |
Cla10g01319 | Cla-Chr10:28103576 | Cla01g01115 | Cla-Chr1:18346000 | 0 | transposed | |
Cla01g01115 | Cla-Chr1:18346000 | Cla01g02066 | Cla-Chr1:35111622 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80255 | PF00069 | Pkinase | 1.00E-36 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla01g01115 | K08286 | - | csv:101213662 | 1095.49 |