Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla01g01132 | ATGAGAAGGCAAAAGAGGCCATATTTTACTCCTATAAGAAGCATATTAACGGCTTTGCAGCCATTCTGGACGAGGAAGACGCAACCCAACTTGCAAGTAGCAGCAGTATTGCCAAACAGAGCGAAAGAATTACACACAACACATTCATGGGAATTTATGCATTTGGAGAAGAATGGGGTGATTCCTCCTTCTTCTCCTTGGCACAGGGCTAAATCTGGAAAAGATGTCATTATTGCCAACCTTGACACTGGTGTATGGCCAGAGTCCAAGAGTTTTGGAGAACATGGCATAGTTGGACCTGTTCCATCAAAGTGGAAAGGAGGTTGCACTGATAAAACCCCTGATCGAGTGCCTTGTAACAGGAAATTAATCGGAGCAAAGTACTTCAACAAGGGATTCCTGGCCTACTTGAAATCTGAAAATTATACGGACCTCTCATCTGTCATCAACTCCACTCGCGACTACGAAGGTCATGGGTCTCACACCTTGTCCACGGCCGGGGGTAGCTACGTGTCTGGTGCCAGCGTGTTTGGGTCGGGTGTCGGAACTGCCAAAGGTGGATCTCCCAAGGCTCGCGTTGCTGCCTACAAGGTCTGCTGGCCACTTGAGGGTGGTGGGTGCTTCGATGCCGACATCGCCGAGGCATTTGACCATGCCATCGATGATGGTGTCGATGTTCTTTCACTCTCCCTCGGCGGCGATCCAGCCGATTACTTTGGCGATTCCATTGCCATTGCCTCTTTCCATGCAATGAAGAAGGGTATCCCTGTGGTGTGCTCTGCCGGCAACTCCGGCCCTGATGCCTGGACTGTTTCTAATACTGCACCTTGGATTTTGACGGTTGCTGCAAGTACTTTAGACCGTGAGTTTCAGGCTCCTGTTGAGCTCCAAAATGGCCATCGTTACATGGGTTCGAGCCTTTCGAAAGCATTGAGAGAAAAGAAGTTGTACCCATTGATTACGGGAGCTCAGGCGAAAACAAAGAACGCCACAGCGGATGAGGCCATGCTTTGCAAGCCGGAAACATTGGATCATTCAAAAGTAAAAGGGAAGATAGTGGCTTGCTTGAGAGGAGACAATGCAAGAGTGGACAAAGGAGAAGAAGCTGCTCTTGCCGGTGCTGCCGGAATGATTCTATGCAACGATATGCTTAGTGGATTTGAAACCATTGCTGATCCCCATGTTCTTCCAGCTTCCCATATCAATTACAATGACGGCCAAGCTGTTCTCTCTTACATCAATTCCACCAAAAATCCAATGGGTTATTTAATCCCACCATCGGCTAAAGTTAACACCAAGCCTGCTCCCTCTATGGCGGCCTTCTCATCTCGAGGACCCAACTTTATTTCACCCGAGATTATCAAGCCGGATGTGACTGCACCTGGCGTAAACATAATCGCCGCATTCTCAGAAGCCGTAAGCCCAACAGGTGAGGCATTCGACAACAGAACGGCTCCATTCATAACAATGTCAGGCACCTCCATGTCTTGCCCACACGTGGCAGGCCTGGTTGGCCTCCTCCGAACTCTCCACCCTCACTGGAGCCCTTCTGCCATCAAATCTGCCATCATGACCTCTGCCAGGGTTCTTGACAACACAATGAAACCCATGCTTGACGGTGGCTCCCCTGACCTCGCCCCTGCCACCCCCTTCGCCTACGGCTCCGGCCACATTCGCCCCGTGGGAGCCATCGACCCTGGCCTCGTCTATGACCTCTCACCCAACGACTACTTGGAATTCCTCTGCGCTAGCGGGTACGATGTGAAGAGCATTCGGGCATTCTCTGACGGCCCTTTCAACTGCCCTGCCTCTGCTTCTATTTTGAACTTCAATTACCCCTCCATTGGGGTTCAGAATTTGAATGGAAGTGTCACCCTCACTAGGAAGCTGAAGAACGTTGGCACTCCTGGGGTTTACAGACCCAAAATTCTCCACCCGGATGGAGTTAAAGTTTCACTGAAGCCTAGAGTTCTCAAGTTTGAGAGAGTTGCAGAGGAGAAGAGCTTTGAATTGACCATCACCGGAGCTGTGCCACAGAATCAGGTTGTTAACGGCGTGTTGATTTGGACGGACGGCAAGCACTTTGTTAGAAGTCCCATTCTCGTTTCTTCTAACTTGTTCTGA | 2124 | 50.14 | MRRQKRPYFTPIRSILTALQPFWTRKTQPNLQVAAVLPNRAKELHTTHSWEFMHLEKNGVIPPSSPWHRAKSGKDVIIANLDTGVWPESKSFGEHGIVGPVPSKWKGGCTDKTPDRVPCNRKLIGAKYFNKGFLAYLKSENYTDLSSVINSTRDYEGHGSHTLSTAGGSYVSGASVFGSGVGTAKGGSPKARVAAYKVCWPLEGGGCFDADIAEAFDHAIDDGVDVLSLSLGGDPADYFGDSIAIASFHAMKKGIPVVCSAGNSGPDAWTVSNTAPWILTVAASTLDREFQAPVELQNGHRYMGSSLSKALREKKLYPLITGAQAKTKNATADEAMLCKPETLDHSKVKGKIVACLRGDNARVDKGEEAALAGAAGMILCNDMLSGFETIADPHVLPASHINYNDGQAVLSYINSTKNPMGYLIPPSAKVNTKPAPSMAAFSSRGPNFISPEIIKPDVTAPGVNIIAAFSEAVSPTGEAFDNRTAPFITMSGTSMSCPHVAGLVGLLRTLHPHWSPSAIKSAIMTSARVLDNTMKPMLDGGSPDLAPATPFAYGSGHIRPVGAIDPGLVYDLSPNDYLEFLCASGYDVKSIRAFSDGPFNCPASASILNFNYPSIGVQNLNGSVTLTRKLKNVGTPGVYRPKILHPDGVKVSLKPRVLKFERVAEEKSFELTITGAVPQNQVVNGVLIWTDGKHFVRSPILVSSNLF | 707 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 18808408 | 18811440 | + | ClCG01G011460.1 | Cla01g01132 | 264721 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla01g01132 | 707 | CDD | Peptidases_S8_3 | 42 | 527 | IPR034197 | - | |
Cla01g01132 | 707 | Pfam | PA domain | 332 | 408 | IPR003137 | - | |
Cla01g01132 | 707 | PRINTS | Subtilisin serine protease family (S8) signature | 73 | 92 | IPR015500 | - | |
Cla01g01132 | 707 | PRINTS | Subtilisin serine protease family (S8) signature | 491 | 507 | IPR015500 | - | |
Cla01g01132 | 707 | PRINTS | Subtilisin serine protease family (S8) signature | 154 | 167 | IPR015500 | - | |
Cla01g01132 | 707 | Gene3D | Peptidase S8/S53 domain | 75 | 577 | IPR036852 | GO:0004252|GO:0006508 | |
Cla01g01132 | 707 | SUPERFAMILY | Subtilisin-like | 44 | 568 | IPR036852 | GO:0004252|GO:0006508 | |
Cla01g01132 | 707 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 49 | 564 | - | - | |
Cla01g01132 | 707 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 492 | 502 | IPR023828 | - | |
Cla01g01132 | 707 | CDD | PA_subtilisin_like | 294 | 423 | - | - | |
Cla01g01132 | 707 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 28 | 702 | IPR045051 | - | |
Cla01g01132 | 707 | Gene3D | - | 287 | 431 | - | - | |
Cla01g01132 | 707 | SUPERFAMILY | PA domain | 345 | 416 | IPR046450 | - | |
Cla01g01132 | 707 | Pfam | Subtilase family | 73 | 533 | IPR000209 | GO:0006508|GO:0008236 | |
Cla01g01132 | 707 | PANTHER | SUBTILISIN-LIKE PROTEASE | 28 | 702 | - | - | |
Cla01g01132 | 707 | Gene3D | - | 581 | 705 | - | - | |
Cla01g01132 | 707 | Pfam | Fibronectin type-III domain | 609 | 702 | IPR041469 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g01129 | Cla-Chr1:18747009 | Cla01g01132 | Cla-Chr1:18808408 | 9.46E-27 | dispersed | |
Cla01g01132 | Cla-Chr1:18808408 | Cla02g00312 | Cla-Chr2:3021280 | 0 | dispersed | |
Cla01g01128 | Cla-Chr1:18746496 | Cla01g01132 | Cla-Chr1:18808408 | 4.49E-75 | proximal | |
Cla01g01131 | Cla-Chr1:18797760 | Cla01g01132 | Cla-Chr1:18808408 | 1.68E-30 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla01g01132 | - | - | csv:101213582 | 1194.49 |