Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g01225 ATGTCGGGCAGCGAATTACTCTTCTCTCTGCCCACCGCAATTTCCCTTCTCTTCTTCTCCTTCACGGCGGCCTTCACGATTTTCTCTTTCTCTCTTTACATCCTCCGCCTTAACCCATGCTGCAATTGCTGTGTTTGCCGCAGCTATCTTTCTTCTTCGTGGTCTTTCTCTTTCCCTAACTTATCAGATTGGTACACTCACCTTCTTTCCCTTTCCCCCACCGCCACCATCCACCTCCACGTCCTCTCCAACATCGTCACCGCCAACCCCGACAACGTCCAACACATCCTCAAATCCAACTTTCATAACTATCCCAAAGGAAAACCATTCTCTTCCATCCTCGGCGACCTTCTCGGTCACGGCATTTTCAACGTCGATGGTCATTCTTGGCGGTTCCAACGCAAGATGGCTAGCTTGGAACTCGGGAGCTTGTCGCTGCGGTCTCACGCTTTCGAGATTTTAACTACTCAGATTCAGACAAGGTTGGTTCCTGTGATGAAGGATGTTGGGGAAGTGGATTTGCAAGATGTGTTTAGGAGGTTTTCGTTTGATAATATTTGTAGATTTTCATTTGGGTTGGATCCGGGGTGTTTAAGGTTGTGTTTGCCCATATCGGAGTTTGCGGTGGCGTTTGATTTGGCGTCGAGGTTATCGGCGGAAAGGGCTATGGCGGCGTCGCCGATTATGTGGAAGATTAAGAGGGTTTTGAGAGTGGGATCGGAGAGGAAGCTTAGGGAAGCTATTAAGATGGTGGATGGGTTAGCGATGGAAGTTATAAGGCAACGGAGGGAGATGGGGTTTTCACATAGGAATGATCTTCTCTCTAGATTCATGGCTTCTACCAATGATGATCGATATCTTAGAGACATTGTTGTTAGCTTTCTCCTCGCCGGTCGGGACACGGTGGCGTCGGCGTTGACTAGCTTATTCTGGCTACTTTCCCAAAACCCGGAAGTAGAGACTAAAATTATCTCCGAGTCAGACCGGATCATGGGACCGGACCGAGACACGGTCCCCAATTTTGACAATCTTAAGGACATGCACTACCTCCAAGCAGCGGTCTACGAAAACATGCGTCTCTTTCCACCCGTTCAGTTCGATTCCAAGTTTGCCGAGGAAGACGACATCTTGCCGGACGGTACATTTGTCCAAAAGGGCACTAGGGTAACTTACCACCCCTACGCCATGGGCCGAATGGACCGGATTTGGGGACCCGATTGTCTCGAGTTCAAACCAGAGAGGTGGCTCAAGAATGGCTACTTTGCGCCCGAAAACCCGTTTAAGTTCCCGGTTTTTCAAGCCGGTTTAAGGGTTTGTTTAGGTAAGGAGCTAGCCGTGATGGACGTGAAATGTGTCGCAGTGGTATTGATTCGGAAGTTTAAGATCCGGTTGGCAGAAGCCGATCGGGTTGCTCGGTTTGCTCCCGGTCTAACGGCTAGCTGGAGAGGTGGGTTACCGGTTCGAATTGAAGAAAGAACCACTTGTTAA 1488 49.53 MSGSELLFSLPTAISLLFFSFTAAFTIFSFSLYILRLNPCCNCCVCRSYLSSSWSFSFPNLSDWYTHLLSLSPTATIHLHVLSNIVTANPDNVQHILKSNFHNYPKGKPFSSILGDLLGHGIFNVDGHSWRFQRKMASLELGSLSLRSHAFEILTTQIQTRLVPVMKDVGEVDLQDVFRRFSFDNICRFSFGLDPGCLRLCLPISEFAVAFDLASRLSAERAMAASPIMWKIKRVLRVGSERKLREAIKMVDGLAMEVIRQRREMGFSHRNDLLSRFMASTNDDRYLRDIVVSFLLAGRDTVASALTSLFWLLSQNPEVETKIISESDRIMGPDRDTVPNFDNLKDMHYLQAAVYENMRLFPPVQFDSKFAEEDDILPDGTFVQKGTRVTYHPYAMGRMDRIWGPDCLEFKPERWLKNGYFAPENPFKFPVFQAGLRVCLGKELAVMDVKCVAVVLIRKFKIRLAEADRVARFAPGLTASWRGGLPVRIEERTTC 495
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 23831449 23834161 + ClCG01G012400.1 Cla01g01225 264814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g01225 495 Pfam Cytochrome P450 73 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01225 495 Gene3D Cytochrome P450 57 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01225 495 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01225 495 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01225 495 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01225 495 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01225 495 PANTHER CYTOCHROME P450 16 491 - -
Cla01g01225 495 PANTHER CYTOCHROME P450 94C1 16 491 - -
Cla01g01225 495 SUPERFAMILY Cytochrome P450 55 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01225 495 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01225 495 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01225 495 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01225 495 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01225 Cla-Chr1:23831449 Cla06g01736 Cla-Chr6:30917302 5.90E-145 dispersed
Cla06g00658 Cla-Chr6:8173802 Cla01g01225 Cla-Chr1:23831449 1.42E-69 transposed
Cla01g01225 Cla-Chr1:23831449 Cla10g01816 Cla-Chr10:34064859 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g01225 K20624 - csv:101207724 887.486