Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g01234 ATGTTGTATAGTTACAAGAAAAGTTTTTCGGGGTTCTCAGCAAAGCTTAATGCAAGCCAAGCAATAGCATTATCAAAGATGGAAGGAGTGATATCCGTATTCGAGAGTAAAACAATGCAACTTCACACAACAAGAAGTTGGGATTTCTTGGGCCTTCCTATAATTCCCTCATATACTAATAATATTAAACCATTATTTCCACTTCGCCTTCCTAGCTATGGCGATCACGATGTTGTTGTTGGCATCTTCGATTCAGGTGTGTGGCCAGAATCTGAAAGTTTCAAGGAGAGTGAGGAGAGGGGGAGACTTCCATGCAATTGGAAAGGTAAATGTGTGAAAGGATACAGATTTAACCCGGCCTTAGCCTGTAACCGCAAGCTAATTGGTGCTCGCTACTACCTTAAAGGCTTCGAAGCCCAATACGGAGCCCTCAACACCACCGCCGGCAACCCCGAGTTCCGCTCCCCTCGAGACTTCTTAGGTCATGGAACTCACACCGCTTCCACTGCGGTGGGTGCGGTCGTGCATAATGTCACCTTCACTACATCTTCATCACTGGCTAAAGGCATTGCCCGAGGTGGGGCTCCCTGGGCCAGGCTGGCAGTGTACAAAGTGTGTTGGGGAAAGGACTACGAGGGCAAGTGCACCGATGCCGACGTCATGGCCGCTTTCGACGACGCTTTGCACGACGGAGTGGACGTCATCTCCGCCTCGTTTGGAGAGACGCCGCCGTTGGCTCCGTTGTTTGAGTCGGCCTCGGCTATTGGCTCATTCCATGCGATGCAGCGGGGAGTGAGCGTGGTGTTCTCTGCTGGGAATGATGGACCCCACCCTTCCCTTGTTCAAAATGTGTCTCCTTGGAGTATTTGTGTTGCTGCTTCTACTATGGATCGAACTTTTCCCACTCCAATACTTATTCACAACCATTTCTCAATCATGGGGGAGAGCTTGATCACAAGAAATATAATAAACGTAAAGCTGGCAGATTCAATCAACTATTTCATAGATGGAATTTGTGAGAGAGACAACATAAGGAAAGGAGGGAAGTCGGGTAAAGGGAAAGTGGTAGTCTGTTTCTCAACCATTGGCCCAGTTTCCATAGGAACTGCACAAGAAGCAGTGAGAGCCATCAATGGCTCCGCTTTAATATTTGGTGCGCCCCCCACGACGGAGCTCCCAGATCTAGATCTCATCCCCACCGTTCGAATTGACATTGCTCAGGCGACTCAAATTCGAAACTTTCTTGCTGAATTACCCAGACTGCCGGCCGTCGAGATCGGCGTCGCGAGAAGTGTGATTGGGAAATCCGTAGCTCCTAGTGTGGCTTACTTTTCATCCAGAGGACCAAGCTCTATCTTACCTGACATTCTCAAGCCAGATATAAGTGCCCCAGGAGTGAACATATTGGCAGCATGGCCTCCGGAAACAGCTCCGACGGTGAGGCCAAGTGGAAGCGTTATTGAAGAAGAAGGTGTAAAATGGAATTTCCAGTCAGGGACTTCAATGTCATGTCCTCATATCTCTGGAGTAGTTGCCCTTATCAAATCTCTTCATCCCCATTGGTCACCTGCCGCCATTAGATCTGCCATCATCACCACAGCCACGAAGAGGGACTCTAGTGGGAATAGCATCCTAGCAGGCGGATCCATGAAACCATCAGACCCATTTGACGTTGGTGCAGGTCAAGTGAACCCCTTAAAGGCCATAAATCCAGGTCTAATCTACGACATCACAACCAGCGATTACATTAGTTTCCTATGCAATATTGGGTATACAGAACAACAAATCAAGATGCTAATTCTCAACCCTTCTCCTCAATTTTGTTGTCCTCCTCAATCCACTACTACCATTAATATTGCAAATCTTAATTATCCGTCAATTACACTTACAAATCTTGGCTCTACCATCACACTCAAAAGAATTGTCCGCAATGTATCACTCAACAAAAACGCCATTTACTTTCTTAGGATTCTTCCTCCCAAGGGAGTCCGAGTACAAGTCTGGCCAAGGATCCTGCTTTTCTCTTGCTTTAGGCAACACCTTTCTTACTATATTACCATAACTCCGCTCAAGAAATCTCGAGGTAGATATGATTTTGGGGAGATTCAATGGTTTAATCGCTTCCATACTGTCACAAGTCCTCTCGTTGTACGTCTTGCCACTTCTACATAA 2172 46.96 MLYSYKKSFSGFSAKLNASQAIALSKMEGVISVFESKTMQLHTTRSWDFLGLPIIPSYTNNIKPLFPLRLPSYGDHDVVVGIFDSGVWPESESFKESEERGRLPCNWKGKCVKGYRFNPALACNRKLIGARYYLKGFEAQYGALNTTAGNPEFRSPRDFLGHGTHTASTAVGAVVHNVTFTTSSSLAKGIARGGAPWARLAVYKVCWGKDYEGKCTDADVMAAFDDALHDGVDVISASFGETPPLAPLFESASAIGSFHAMQRGVSVVFSAGNDGPHPSLVQNVSPWSICVAASTMDRTFPTPILIHNHFSIMGESLITRNIINVKLADSINYFIDGICERDNIRKGGKSGKGKVVVCFSTIGPVSIGTAQEAVRAINGSALIFGAPPTTELPDLDLIPTVRIDIAQATQIRNFLAELPRLPAVEIGVARSVIGKSVAPSVAYFSSRGPSSILPDILKPDISAPGVNILAAWPPETAPTVRPSGSVIEEEGVKWNFQSGTSMSCPHISGVVALIKSLHPHWSPAAIRSAIITTATKRDSSGNSILAGGSMKPSDPFDVGAGQVNPLKAINPGLIYDITTSDYISFLCNIGYTEQQIKMLILNPSPQFCCPPQSTTTINIANLNYPSITLTNLGSTITLKRIVRNVSLNKNAIYFLRILPPKGVRVQVWPRILLFSCFRQHLSYYITITPLKKSRGRYDFGEIQWFNRFHTVTSPLVVRLATST 723
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 24647940 24656450 + ClCG01G012510.2 Cla01g01234 264823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g01234 723 Pfam Peptidase inhibitor I9 1 42 IPR010259 -
Cla01g01234 723 Pfam Subtilase family 76 539 IPR000209 GO:0006508|GO:0008236
Cla01g01234 723 Gene3D - 586 720 - -
Cla01g01234 723 Pfam Fibronectin type-III domain 621 717 IPR041469 -
Cla01g01234 723 Gene3D - 297 433 - -
Cla01g01234 723 PRINTS Subtilisin serine protease family (S8) signature 158 171 IPR015500 -
Cla01g01234 723 PRINTS Subtilisin serine protease family (S8) signature 75 94 IPR015500 -
Cla01g01234 723 PRINTS Subtilisin serine protease family (S8) signature 498 514 IPR015500 -
Cla01g01234 723 SUPERFAMILY Subtilisin-like 41 573 IPR036852 GO:0004252|GO:0006508
Cla01g01234 723 Gene3D Peptidase S8/S53 domain 77 582 IPR036852 GO:0004252|GO:0006508
Cla01g01234 723 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 714 IPR045051 -
Cla01g01234 723 PANTHER SUBTILISIN-LIKE PROTEASE SBT3.18 1 714 - -
Cla01g01234 723 ProSiteProfiles Serine proteases, subtilase domain profile. 46 569 - -
Cla01g01234 723 ProSitePatterns Serine proteases, subtilase family, serine active site. 499 509 IPR023828 -
Cla01g01234 723 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 42 IPR037045 -
Cla01g01234 723 CDD Peptidases_S8_3 40 535 IPR034197 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01234 Cla-Chr1:24647940 Cla07g00778 Cla-Chr7:21740772 2.07E-177 dispersed
Cla01g01234 Cla-Chr1:24647940 Cla09g00096 Cla-Chr9:943443 1.91E-150 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g01234 - - bhj:120083115 1294.64