Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla01g01294 | ATGAGGAATTTAAACTGGTTTAAGCCAATTTCGATTAATGGGAAGCCTGGGAGGAGGCTTTCACTAGGAGAATACCAGCGTGCTGTGTCGTGGTCTAAGTATTTGGTGTCTTCAGGAGCAGAGATAAAGGGAGAGGGAGAAGAGGAATGGAGTGCTGACATGTCCCAGTTGTTCATTGGCTTCAAATTTGCTACTGGAAGGCACAGTAGGATTTACAGAGGTGTGTATAAACAGAGGGATGTTGCAATTAAGCTGATAAGCCAGCCTGAGGAGGATGAAAATTTGGCTAACTTTCTTGAGAATCAGTTCATTTCAGAGGTGGCATTGCTGTTTCGATTGAGACATCCCAATATCATCACTTTCATTGCAGCTTGCAAGAAACCTCCAGTGTTTTGTATTATCACGGAGTATATGACAGGAGGTTCGTTAAGAAAATATCTCCATCAACAAGAGCCACATTCCGTTCCGCTGAACTTGGTTCTGAAACTAGCCCTCGAAATCTCACGTGGGATGCAGTACCTTCATTCTCAGGGAATACTCCACAGAGATCTCAAATCAGAAAATCTCTTACTCGGTGAAGATATGTGTGTTAAGGTAGCAGATTTCGGTATCTCATGCTTAGAATCTCAATGTGGAAGTGCGAAGGGATTCACCGGAACTTACCGCTGGATGGCACCTGAAATGATCAAAGAAAAACACCACACTAAGAAAGTTGATGTTTATAGCTTTGGCATTGTCTTATGGGAGCTCTTAACTGCATTGACACCATTTGATAACATGACTCCTGAACAGGCAGCATTTGCAGTCTGCCAGAAGAATGCAAGACCACCGCTGCCTTCTGCTTGCCCGCAGGCATTTCGTCATCTGATCAAGAGATGCTGGTCGAGAAATCCCAACAAGCGACCGCACTTTGATGAGATCGTTTCAATCTTGGAAACTTATGCGGAGTGTTACAATGAAGATCCAGATTTTTTTGGTCATTACGTCCCCTCGTCTAGATATACTGCTTTGCAATGCTTACCAAAATCATCTTATCTTGCTTCAAGCCTTAGGATTTGGCCACACCCCATGAGGAATTTAAACTGGTTTAAGCCAATTTCGATTAATGGGAAGCCTGGGAGGAGGCTTTCACTAGGAGAATACCAGCGTGCTGTGTCGTGGTCTAAGTATTTGGTGTCTTCAGGAGCAGAGATAAAGGGAGAGGGAGAAGAGGAATGGAGTGCTGACATGTCCCAGTTGTTCATTGGCTTCAAATTTGCTACTGGAAGGCACAGTAGGATTTACAGAGGTGTGTATAAACAGAGGGATGTTGCAATTAAGCTGATAAGCCAGCCTGAGGAGGATGAAAATTTGGCTAACTTTCTTGAGAATCAGTTCATTTCAGAGGTGGCATTGCTGTTTCGATTGAGACATCCCAATATCATCACTTTCATTGCAGCTTGCAAGAAACCTCCAGTGTTTTGTATTATCACGGAGTATATGACAGGAGGTTCGTTAAGAAAATATCTCCATCAACAAGAGCCACATTCCGTTCCGCTGAACTTGGTTCTGAAACTAGCCCTCGAAATCTCACGTGGGATGCAGTACCTTCATTCTCAGGGAATACTCCACAGAGATCTCAAATCAGAAAATCTCTTACTCGGTGAAGATATGTGTGTTAAGGTAGCAGATTTCGGTATCTCATGCTTAGAATCTCAATGTGGAAGTGCGAAGGGATTCACCGGAACTTACCGCTGGATGGCACCTGAAATGATCAAAGAAAAACACCACACTAAGAAAGTTGATGTTTATAGCTTTGGCATTGTCTTATGGGAGCTCTTAACTGCATTGACACCATTTGATAACATGACTCCTGAACAGGCAGCATTTGCAGTCTGCCAGAAGAATGCAAGACCACCGCTGCCTTCTGCTTGCCCGCAGGCATTTCGTCATCTGATCAAGAGATGCTGGTCGAGAAATCCCAACAAGCGACCGCACTTTGATGAGATCGTTTCAATCTTGGAAACTTATGCGGAGTGTTACAATGAAGATCCAGATTTTTTTGGTCATTACGTCCCCTCGTCTAGATATACTGCTTTGCAATGCTTACCAAAATGTATTACCAAACAATTATCTGCTTCCTTGAAACCTAGGAATTCTTCCTCATCTTGA | 2151 | 43.42 | MRNLNWFKPISINGKPGRRLSLGEYQRAVSWSKYLVSSGAEIKGEGEEEWSADMSQLFIGFKFATGRHSRIYRGVYKQRDVAIKLISQPEEDENLANFLENQFISEVALLFRLRHPNIITFIAACKKPPVFCIITEYMTGGSLRKYLHQQEPHSVPLNLVLKLALEISRGMQYLHSQGILHRDLKSENLLLGEDMCVKVADFGISCLESQCGSAKGFTGTYRWMAPEMIKEKHHTKKVDVYSFGIVLWELLTALTPFDNMTPEQAAFAVCQKNARPPLPSACPQAFRHLIKRCWSRNPNKRPHFDEIVSILETYAECYNEDPDFFGHYVPSSRYTALQCLPKSSYLASSLRIWPHPMRNLNWFKPISINGKPGRRLSLGEYQRAVSWSKYLVSSGAEIKGEGEEEWSADMSQLFIGFKFATGRHSRIYRGVYKQRDVAIKLISQPEEDENLANFLENQFISEVALLFRLRHPNIITFIAACKKPPVFCIITEYMTGGSLRKYLHQQEPHSVPLNLVLKLALEISRGMQYLHSQGILHRDLKSENLLLGEDMCVKVADFGISCLESQCGSAKGFTGTYRWMAPEMIKEKHHTKKVDVYSFGIVLWELLTALTPFDNMTPEQAAFAVCQKNARPPLPSACPQAFRHLIKRCWSRNPNKRPHFDEIVSILETYAECYNEDPDFFGHYVPSSRYTALQCLPKCITKQLSASLKPRNSSSS | 716 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 26249281 | 26254959 | + | ClCG01G013090.1 | Cla01g01294 | 264883 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla01g01294 | 716 | Gene3D | Transferase(Phosphotransferase) domain 1 | 140 | 324 | - | - | |
Cla01g01294 | 716 | Gene3D | Transferase(Phosphotransferase) domain 1 | 496 | 680 | - | - | |
Cla01g01294 | 716 | SMART | serkin_6 | 57 | 315 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla01g01294 | 716 | SMART | serkin_6 | 413 | 671 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla01g01294 | 716 | SUPERFAMILY | Protein kinase-like (PK-like) | 403 | 667 | IPR011009 | - | |
Cla01g01294 | 716 | CDD | STKc_MAP3K-like | 422 | 667 | - | - | |
Cla01g01294 | 716 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 535 | 547 | IPR008271 | GO:0004672|GO:0006468 | |
Cla01g01294 | 716 | SUPERFAMILY | Protein kinase-like (PK-like) | 47 | 311 | IPR011009 | - | |
Cla01g01294 | 716 | CDD | STKc_MAP3K-like | 66 | 311 | - | - | |
Cla01g01294 | 716 | PRINTS | Tyrosine kinase catalytic domain signature | 219 | 229 | IPR001245 | GO:0004672|GO:0006468 | |
Cla01g01294 | 716 | PRINTS | Tyrosine kinase catalytic domain signature | 173 | 191 | IPR001245 | GO:0004672|GO:0006468 | |
Cla01g01294 | 716 | PRINTS | Tyrosine kinase catalytic domain signature | 135 | 148 | IPR001245 | GO:0004672|GO:0006468 | |
Cla01g01294 | 716 | PRINTS | Tyrosine kinase catalytic domain signature | 238 | 260 | IPR001245 | GO:0004672|GO:0006468 | |
Cla01g01294 | 716 | PRINTS | Tyrosine kinase catalytic domain signature | 282 | 304 | IPR001245 | GO:0004672|GO:0006468 | |
Cla01g01294 | 716 | PANTHER | SERINE/THREONINE-KINASE HT1-LIKE PROTEIN | 357 | 689 | - | - | |
Cla01g01294 | 716 | PANTHER | SERINE/THREONINE-KINASE HT1-LIKE PROTEIN | 1 | 333 | - | - | |
Cla01g01294 | 716 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 357 | 689 | - | - | |
Cla01g01294 | 716 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 1 | 333 | - | - | |
Cla01g01294 | 716 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 179 | 191 | IPR008271 | GO:0004672|GO:0006468 | |
Cla01g01294 | 716 | ProSiteProfiles | Protein kinase domain profile. | 57 | 315 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla01g01294 | 716 | ProSiteProfiles | Protein kinase domain profile. | 413 | 671 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla01g01294 | 716 | Pfam | Protein tyrosine and serine/threonine kinase | 62 | 311 | IPR001245 | GO:0004672|GO:0006468 | |
Cla01g01294 | 716 | Pfam | Protein tyrosine and serine/threonine kinase | 418 | 667 | IPR001245 | GO:0004672|GO:0006468 | |
Cla01g01294 | 716 | Gene3D | Phosphorylase Kinase; domain 1 | 47 | 139 | - | - | |
Cla01g01294 | 716 | Gene3D | Phosphorylase Kinase; domain 1 | 403 | 495 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g01294 | Cla-Chr1:26249281 | Cla01g02251 | Cla-Chr1:36458051 | 7.41E-107 | dispersed | |
Cla01g00200 | Cla-Chr1:1988980 | Cla01g01294 | Cla-Chr1:26249281 | 1.87E-25 | transposed | |
Cla01g02105 | Cla-Chr1:35335976 | Cla01g01294 | Cla-Chr1:26249281 | 9.87E-135 | transposed | |
Cla02g00400 | Cla-Chr2:3896275 | Cla01g01294 | Cla-Chr1:26249281 | 1.21E-43 | transposed | |
Cla02g01888 | Cla-Chr2:34064488 | Cla01g01294 | Cla-Chr1:26249281 | 1.03E-31 | transposed | |
Cla05g00127 | Cla-Chr5:1208568 | Cla01g01294 | Cla-Chr1:26249281 | 8.18E-27 | transposed | |
Cla05g01594 | Cla-Chr5:27021993 | Cla01g01294 | Cla-Chr1:26249281 | 6.01E-78 | transposed | |
Cla08g00702 | Cla-Chr8:19267285 | Cla01g01294 | Cla-Chr1:26249281 | 2.30E-58 | transposed | |
Cla10g00044 | Cla-Chr10:506616 | Cla01g01294 | Cla-Chr1:26249281 | 1.42E-55 | transposed | |
Cla10g01559 | Cla-Chr10:30987786 | Cla01g01294 | Cla-Chr1:26249281 | 1.31E-38 | transposed | |
Cla11g01089 | Cla-Chr11:22239628 | Cla01g01294 | Cla-Chr1:26249281 | 1.78E-90 | transposed | |
Cla01g01294 | Cla-Chr1:26249281 | Cla10g01357 | Cla-Chr10:28613891 | 7.30E-64 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80258 | PF07714 | PK_Tyr_Ser-Thr | 4.10E-65 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla01g01294 | - | - | csv:101222762 | 711.835 |