Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g01302 ATGGAGGAAACATTTTTTCCGTTTCGTGGGATTAAGAATGATCTAAAAGGAAGACTTCTGTGCTACAGACAGGATTGGACTGGAGGCTTTCGCGCTGGTATCAGGATCTTGGCCCCAACAACGTATATATTCTTTGCTTCAGCAATTCCGGTTATATCGTTTGGGGAGCAGCTAGAAAGGAATACATACGGGACTCTAACTGCCGTACAAACTCTAGCATCAACAGCATTTTGTGGCATTATCCACTCAGTCTTTGGGGGACAGCCTCTGCTTATCCTTGGTGTTGCTGAACCAACTGTTTTGATGTATACGTTCATGTTCGACTTTGCAAAGGACCGAAAGGAACTGGGACAGGAACTATTCTTAGCCTGGACAGGATGGGTATGTGTATGGACAGGCATCTTGCTTTTCTTGCTTGCGGTGTTGGGTGCATGCTCCCTGATCAATAGGTTCACACGTCTTGCTGGTGAATTGTTTGGTCTGCTAATTGCCATGCTCTTCATGCAGCAGGCAATACGTGGTGTTGTGGAGGAATTCGGCATACCCCAAAGGGAAAATCCTAATCAGGTGGCGCTCCAACCTCCTTGGCGCTTTGGCAATGGAATGTTTGCATTAGTGCTGTCCTTCGGGCTTCTGCTAACTGCCCTTAAAAGCCGCAAAGCTAGATCATGGCGCTATGGGACTGGTTGCCTACGTGGCCTTATTGCTGATTATGGAGTTCCACTTATGGTGCTCGTATGGACAGCCTTATCTTACATTCCAGTCAACAATGTCCCACTTGGGATCCCAAGAAGGCTTTTCAGTCCCAATCCATGGTCTCAGGGTGCCTACTCAAATTGGACGGTTATAAAGGAAATGTTGAGAGTGCCTCCATTGTATATAGTTGGAGCATTCATACCAGCAACCATGATAGCAGTTCTTTACTACTTTGATCACAGTGTTGCATCTCAGCTTGCCCAACAGAAAGAGTTTAATTTGAAAAAACCAGCTTCATATCATTATGATCTTCTCCTCCTAGGTTTCCTTGTTATCCTGTGTGGACTTATAGGCATACCACCTTCTAATGGTGTAATTCCTCAGTCTCCGATGCACACAAAAAGCTTAGCTACCCTAAAACATCAGCTTTTGCGGAGCAAGCTGGTAGCAGCAGCGCGACAAAGTTTCCGTAAAAATTCGAACTTGAGTCAATTATACCGGAACATGCAAGAGGCATATAATGAGATTCAGACTCCTTTAATTTATCAAAATCCACCAGCTGTGGGGCTGAAGGAGTTGAAGGATTCCACGATCCAACTAGCTTCAAGAACTGGCTACATTGATGCACCTGTTGATGAAACTGTTTTCGATGTGGACAAAGATATTGATGATCTTCTGCCAGTAGAAGTTAAAGAACAACGTCTCAGCAATTTGCTTCAGGCAGTAATGGTTGGTGGTTGTGTTGCTGCTATGCCTCTTTTAAAGAAGATCCCGACTTCGGTTCTTTGGGGCTACTTCGCTTTCATGGCAATCGAGAGCTTACCCGGAAATCAATTTTGGGAAAGGATTTTACTTCTTTTCACTGCTCCGAACCGAAGATACAAGGTGCTGGAGGAATATCATGCAACCTTTCTAGAAACTGTCCCCTTCAAAACAATTGCCACCTTCACCTTGTTTCAGACAGTATATCTGCTGATGTGTTTTGGATTAACCTGGATTCCAATTGCTGGTGTTCTTTTTCCGCTGTTGATCATGCTTCTCGTCCCTGTGCGCCAGTACTTGCTCCCCAAGTTCTTCAAAGGTGCTCATCTTCAGGACTTGGATGCTGCTGAATATGAGGAAGCTCCTGCAGTCACTTTTAATCCGTCATTCGAAGATCGAATGGGAAGAACTCCCAACATTGATGACGGTGAAATACTCGACGAGATGATCACAAGAAGCCGTGGCGAGATTCGACGTACACAAGGTTCAAAAGTGATAAGCTCATCCCCAACGTCTCTAGAGGGCATCAAACCTGCCTACAGCCCACAGATACCACAGAAACTTTACAGTCCACGGATCAATGAGCTGAGAAGAGAGAGAAGTTCTCTATCTCCTGGAAAAGGACTTGAGTTTAAGCTAAATTCTAGTCCTAGTCCTAGGGAAGAACCAGGGCCAGGACCTTCTTTTAGAAATTAG 2154 44.99 MEETFFPFRGIKNDLKGRLLCYRQDWTGGFRAGIRILAPTTYIFFASAIPVISFGEQLERNTYGTLTAVQTLASTAFCGIIHSVFGGQPLLILGVAEPTVLMYTFMFDFAKDRKELGQELFLAWTGWVCVWTGILLFLLAVLGACSLINRFTRLAGELFGLLIAMLFMQQAIRGVVEEFGIPQRENPNQVALQPPWRFGNGMFALVLSFGLLLTALKSRKARSWRYGTGCLRGLIADYGVPLMVLVWTALSYIPVNNVPLGIPRRLFSPNPWSQGAYSNWTVIKEMLRVPPLYIVGAFIPATMIAVLYYFDHSVASQLAQQKEFNLKKPASYHYDLLLLGFLVILCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRSKLVAAARQSFRKNSNLSQLYRNMQEAYNEIQTPLIYQNPPAVGLKELKDSTIQLASRTGYIDAPVDETVFDVDKDIDDLLPVEVKEQRLSNLLQAVMVGGCVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPNRRYKVLEEYHATFLETVPFKTIATFTLFQTVYLLMCFGLTWIPIAGVLFPLLIMLLVPVRQYLLPKFFKGAHLQDLDAAEYEEAPAVTFNPSFEDRMGRTPNIDDGEILDEMITRSRGEIRRTQGSKVISSSPTSLEGIKPAYSPQIPQKLYSPRINELRRERSSLSPGKGLEFKLNSSPSPREEPGPGPSFRN 717
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 26369501 26375686 + ClCG01G013190.1 Cla01g01302 264891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g01302 717 Pfam HCO3- transporter family 202 373 IPR011531 GO:0006820|GO:0016021
Cla01g01302 717 Pfam HCO3- transporter family 7 179 IPR011531 GO:0006820|GO:0016021
Cla01g01302 717 Pfam HCO3- transporter family 460 550 IPR011531 GO:0006820|GO:0016021
Cla01g01302 717 PANTHER ANION EXCHANGE PROTEIN 1 692 IPR003020 GO:0005452|GO:0006820|GO:0016020
Cla01g01302 717 PANTHER BORON TRANSPORTER 2-RELATED 1 692 - -
Cla01g01302 717 MobiDBLite consensus disorder prediction 643 717 - -
Cla01g01302 717 Gene3D Helical hairpin bin 18 60 - -
Cla01g01302 717 MobiDBLite consensus disorder prediction 646 662 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01302 Cla-Chr1:26369501 Cla10g01116 Cla-Chr10:25530225 0 dispersed
Cla01g01302 Cla-Chr1:26369501 Cla07g01228 Cla-Chr7:29250432 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g01302 K24194 - csv:101203606 1373.99