Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla01g01394 | ATGACTTTCCCTTTCCCATTACTTTTCCTCATTATTATCACCATCTCCTTTTCCCTCCCCTTCCCCTCTCTTGTTCACTCCAAACTCACCCTTGGTTATTACCAAAACACCTGTCCCGACTTCGAGAAGATCATTCGTGAAACTGTCACCAATAAACAAATCACCAGCCCTGTCACGGCCGCTGGAACCCTTCGCCTCTTCTTCCACGACTGCATGGTTGATGGTTGCGACGCCTCCATCCTCATTTCCTCCAACTCCTTCAACCAAGCCGAGCGTGAGGCTGAAATCAACCATTCCCTCTCTGGTGACGCCTTCGACGTCGTCGTCCATGCTAAGACCAACCTCGAACTTGCTTGCCCTGGCATTGTCTCTTGTTCCGACATCTTGGCACAGGCAACTCGAGATTTAGTGGTGATGGTGGGAGGGCCATTCTACAACGTTCGATTGGGGAGAAAAGATGGAATGTTATCAAAAGTAGAAAACGTGGAAGGGAACCTTCCAAAAGTGGACTTCTCAATAGACAAACTCATCGATTTCTTCACCCAAAGAGGCTTCACCATCCAAGAACTAGTCGCCCTCTCCGGAGGGCACACCATCGGCTTCTCCCACTGTAAGGAATTCTCCGACCGCCTCTTTAACTTCAACGCCATGTCACCCACCGACCCTGACATTTACCCCAAATTTGCCGAAAAGCTCAAAGCCATGTGTGCCAATTACCTCACAGACACTGCCATGTCAGCTTTCAATGACGTCATGACACCTGGCAAATTCGACAACATGTACTTCCAGAATCTTCCACGTGGCCTTGGCCTACTCGCTACTGACAACGCCCTCTATAAAGACCCTAGGACCAAGCCGTTTGTGGATCTTTACGCCGTTAATCAAACGGCATTTTTTAAGGACTTTGCTCATGCAATGGAGAAGCTTAGCGTTTACGGCGTGAAGACGGGAAGGAAAGGGGAGGTTCGACGAAGGTGTGACCTCTTTAATTCCATTCAGACATGA | 1005 | 49.05 | MTFPFPLLFLIIITISFSLPFPSLVHSKLTLGYYQNTCPDFEKIIRETVTNKQITSPVTAAGTLRLFFHDCMVDGCDASILISSNSFNQAEREAEINHSLSGDAFDVVVHAKTNLELACPGIVSCSDILAQATRDLVVMVGGPFYNVRLGRKDGMLSKVENVEGNLPKVDFSIDKLIDFFTQRGFTIQELVALSGGHTIGFSHCKEFSDRLFNFNAMSPTDPDIYPKFAEKLKAMCANYLTDTAMSAFNDVMTPGKFDNMYFQNLPRGLGLLATDNALYKDPRTKPFVDLYAVNQTAFFKDFAHAMEKLSVYGVKTGRKGEVRRRCDLFNSIQT | 334 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 28330345 | 28331605 | + | ClCG01G014090.2 | Cla01g01394 | 264983 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla01g01394 | 334 | PRINTS | Haem peroxidase superfamily signature | 60 | 74 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01394 | 334 | PRINTS | Haem peroxidase superfamily signature | 123 | 140 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01394 | 334 | PRINTS | Haem peroxidase superfamily signature | 141 | 153 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01394 | 334 | PRINTS | Haem peroxidase superfamily signature | 189 | 204 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01394 | 334 | PRINTS | Haem peroxidase superfamily signature | 250 | 265 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01394 | 334 | SUPERFAMILY | Heme-dependent peroxidases | 29 | 330 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01394 | 334 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 189 | 199 | IPR019793 | - | |
Cla01g01394 | 334 | Pfam | Peroxidase | 47 | 293 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01394 | 334 | PANTHER | PEROXIDASE 41 | 7 | 334 | - | - | |
Cla01g01394 | 334 | Gene3D | Peroxidase, domain 2 | 167 | 309 | - | - | |
Cla01g01394 | 334 | ProSitePatterns | Peroxidases active site signature. | 60 | 71 | IPR019794 | GO:0004601 | |
Cla01g01394 | 334 | ProSiteProfiles | Plant heme peroxidase family profile. | 28 | 330 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01394 | 334 | Gene3D | - | 32 | 330 | - | - | |
Cla01g01394 | 334 | PRINTS | Plant peroxidase signature | 38 | 57 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01394 | 334 | PRINTS | Plant peroxidase signature | 62 | 82 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01394 | 334 | PRINTS | Plant peroxidase signature | 103 | 116 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01394 | 334 | PRINTS | Plant peroxidase signature | 122 | 132 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01394 | 334 | PRINTS | Plant peroxidase signature | 141 | 156 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01394 | 334 | PRINTS | Plant peroxidase signature | 188 | 200 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01394 | 334 | PRINTS | Plant peroxidase signature | 248 | 263 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01394 | 334 | PRINTS | Plant peroxidase signature | 264 | 281 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01394 | 334 | PRINTS | Plant peroxidase signature | 304 | 317 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01394 | 334 | CDD | secretory_peroxidase | 28 | 329 | IPR033905 | GO:0004601|GO:0042744 | |
Cla01g01394 | 334 | PANTHER | - | 7 | 334 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g01394 | Cla-Chr1:28330345 | Cla10g01386 | Cla-Chr10:28962334 | 1.79E-133 | dispersed | |
Cla03g00743 | Cla-Chr3:9015047 | Cla01g01394 | Cla-Chr1:28330345 | 5.71E-10 | transposed | |
Cla01g01394 | Cla-Chr1:28330345 | Cla06g01637 | Cla-Chr6:29893824 | 2.47E-160 | wgd | |
Cla01g01394 | Cla-Chr1:28330345 | Cla09g01824 | Cla-Chr9:35882966 | 1.22E-133 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla01g01394 | K00430 | - | csv:101220163 | 585.489 |