Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g01428 ATGGCGCCGGTTTTATCTCGGTTACTTCTCCGACGGAATGTTCACGCACCATTTCTTCGCACCTCCACCACCGCCTTCAACTTTTGCAGAACAATTCATTCTATAGTTTTCTCTACGGTAGAAGTGGATCAACTATCAGGTTCTAAGCCAGGAGATGTTCACAACTTGGTTCTGGCTAAACTTCTTCGTTGCATAAGGAAAGGAATGTTGACACAACTTGTGTTTATTTTAGTGCAGGGTAAATGGATTGGATCTTCCGGTTGGCATACTATTGTAGATCCTTTAAATGGAGAACCGTTTATTAGAGTTGCCGAAGTCAATGAAACAGAGATTCAGCCATTTGTGAAGAGTCTGACCAAATGCCCTAAGCATGGCTTACATAATCCTTTCAAATCGCCTGAGAGATATCTGTTGTTTGGAGATGTATCTTCCAAGGCTGCTGACATGCTTTCCAAGCCAGAGGTGACTGACTTCTTCGCAAGGTTAATTCAAAGAGTTTCTCCAAAAAGTTATCAGCAAGCTTGTGCTGAAGTGAATGTCACTGTTAAATTTCTACGGAACTTCTCTGGCGACCAGGTTCGCTTCTTAGCAAGGTCCTTTGCAGTACCTGGAGATCATCTTGGACAACAAAGTCATGGTTTCCGTTGGCCATATGGTCCCGTTGCAATTATCACTCCTTTCAATTTCCCATTAGAAATTCCTGTACTTCAGGTGATGGGTGCACTTTACATGGGCAACAAACCTGTTTTAAAAGTTGATAGCAAGGTTAGCATAGTTATGGAGCAAATGATTCGATTGCTTCACCATTGTGGGCTACCTTTGGAAGATCTAGATTTTATAAATTGTGATGGGAAGACAATGAACAAGTTATTGATTGAGGCAAATCCATCCATGACTCTTTTTACCGGCAGCTCAAGGGTGGCAGATAAGTTGGCTGTAGACTTGAAGGGCCGCATTAAATTGGAAGATGCAGGTTTCGATTGGAAAATCTTAGGACCTGATGTTCGAGAGGAAGACTATGTTGCATGGGTTTGTGACCAAGATGCATATGCTTGTAGTGGCCAGAAGTGCTCGGCACAATCGATACTGTTCATGCATGAGAACTGGTCAACGACTTCACTTATTTCAAAGATAAAGAATCTTGCAGAGAGAAGAAATTTGACCGATTTAACAATTGGCCCAGTTCTTACATTCACAAATGAAATGATACTAGATCATATGAATAAATTGCTCAAAATACCAGGGGCAAAGTTACTCTTTGGTGGTGAACCTCTAAAAAACCATTCCATTCCACCCATATATGGTGCTATAAAACCCACTGCATTATATATTCCACTCGAAGAAATGATGAAAGATGAGAATTATGAGCTCGTGACTAAAGAAATTTTTGGACCATTCCAGATTATTACGGAATACAAGAGAGATCAACTTCCAGTTGTGTTGGATGCTCTTGAGCGGATGCATGCTCATCTAACCGCCGCTGTTGTTTCAAACGACCCTCTTTTTTTGCAGGAAGTTATTGGCAATACGGTGAACGGAACGACATATGTAGGTTTACGAGCGAGGACAACAGGAGCTCCGCAAAACCATTGGTTTGGACCTGCCGGAGACCCTAGGGGTGCAGGTATCGGAACCCCGGAAGCCATCAAACTTGTATGGTCTTGCCATAGAGAGATCATATATGATATTGGCCCGTTGCCCTTGAATTGGACAGTTCCACCATCGACTTGA 1731 42.4 MAPVLSRLLLRRNVHAPFLRTSTTAFNFCRTIHSIVFSTVEVDQLSGSKPGDVHNLVLAKLLRCIRKGMLTQLVFILVQGKWIGSSGWHTIVDPLNGEPFIRVAEVNETEIQPFVKSLTKCPKHGLHNPFKSPERYLLFGDVSSKAADMLSKPEVTDFFARLIQRVSPKSYQQACAEVNVTVKFLRNFSGDQVRFLARSFAVPGDHLGQQSHGFRWPYGPVAIITPFNFPLEIPVLQVMGALYMGNKPVLKVDSKVSIVMEQMIRLLHHCGLPLEDLDFINCDGKTMNKLLIEANPSMTLFTGSSRVADKLAVDLKGRIKLEDAGFDWKILGPDVREEDYVAWVCDQDAYACSGQKCSAQSILFMHENWSTTSLISKIKNLAERRNLTDLTIGPVLTFTNEMILDHMNKLLKIPGAKLLFGGEPLKNHSIPPIYGAIKPTALYIPLEEMMKDENYELVTKEIFGPFQIITEYKRDQLPVVLDALERMHAHLTAAVVSNDPLFLQEVIGNTVNGTTYVGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREIIYDIGPLPLNWTVPPST 576
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 28755830 28761233 - ClCG01G014440.2 Cla01g01428 265017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g01428 576 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 70 325 IPR016162 GO:0016491
Cla01g01428 576 SUPERFAMILY ALDH-like 77 544 IPR016161 GO:0016491
Cla01g01428 576 Pfam Aldehyde dehydrogenase family 90 526 IPR015590 GO:0016491
Cla01g01428 576 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 327 518 IPR016163 GO:0016620
Cla01g01428 576 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 27 575 IPR044638 GO:0004029
Cla01g01428 576 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 350 361 IPR016160 GO:0016491
Cla01g01428 576 PANTHER DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE 12A1, MITOCHONDRIAL 27 575 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01428 Cla-Chr1:28755830 Cla06g01654 Cla-Chr6:30056618 2.85E-13 dispersed
Cla01g01428 Cla-Chr1:28755830 Cla02g01637 Cla-Chr2:31170876 1.79E-12 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g01428 K00294 - csv:101214440 1078.16