Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla01g01451 | ATGCCGCCGAGACGATATGCCGTTGGACGGGCCGATGAGGCCACTCACCCTGACTCCATTCGAGCCACCTTGGCTGAGTTCATTTCCACTTTCATCTTCGTTTTCGCTGGCGAAGGCTCTGTTCTCGCTCTTGATAAAATTTTTAGGCCAGCGGATTATGGAAGTTATGGTCATGGAAGTTACGGCCGAGGAGGACACGGTTACGGTCATGGTTATGGTTATGGTCGAAGGGGGGCGGACACGGGCAGAGCTGCATCAGATTTAGTAGTGATAGCGATAGCGCATGCATTTGCGCTGTTCTCGGCGGTGGCGGCGAGTATCAATATTTCGGGTGGGCATGTGAATCCTGCAGTAACTTTTGGGGCTCTTCTTGGGGGGAGGATCTCTCTTATCCGTGCATTCTTCTATTGGGTTGCTCAGATATTGGGTGCCATTGTTGCTTCACTTCTCTTGAGACTCGCAACGGGTGGCATGAGGCCTATGGGGTTCTTTGTGTCATCGGGAATATCAGAATTACACGGATTTCTACTAGAGATAGTGCTTACATTTGCTTTGGTGTACACAGTCTACGCAACAGCAATAGACCCAAAGAGGGGGAGTTTGGGAACAATAGCACCACTGGCAATCGGGTTAATAGTCGGGGCCAATATTCTGGTGGGTGGGGCCTTCGATGGGGCCTGCATGAACCCTGCCAGGGCTTTTGGGCCGTCTTTAGTGGGCTGGAGATGGGACAATCATTGGATCTATTGGATCGGCCCATTATTGGGAGGTGGGCTTGCGGCCCTTGTATATGAGTACTTGGTTATTCCCGTTGAACCTCCTCTTCATACACACCAGCCCTTAGCTCCGGAGGATTACTGA | 861 | 51.45 | MPPRRYAVGRADEATHPDSIRATLAEFISTFIFVFAGEGSVLALDKIFRPADYGSYGHGSYGRGGHGYGHGYGYGRRGADTGRAASDLVVIAIAHAFALFSAVAASINISGGHVNPAVTFGALLGGRISLIRAFFYWVAQILGAIVASLLLRLATGGMRPMGFFVSSGISELHGFLLEIVLTFALVYTVYATAIDPKRGSLGTIAPLAIGLIVGANILVGGAFDGACMNPARAFGPSLVGWRWDNHWIYWIGPLLGGGLAALVYEYLVIPVEPPLHTHQPLAPEDY | 286 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 29009237 | 29011150 | - | ClCG01G014680.2 | Cla01g01451 | 265040 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla01g01451 | 286 | PRINTS | Major intrinsic protein family signature | 21 | 40 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla01g01451 | 286 | PRINTS | Major intrinsic protein family signature | 132 | 151 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla01g01451 | 286 | PRINTS | Major intrinsic protein family signature | 177 | 195 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla01g01451 | 286 | PRINTS | Major intrinsic protein family signature | 210 | 232 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla01g01451 | 286 | PRINTS | Major intrinsic protein family signature | 247 | 267 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla01g01451 | 286 | PANTHER | AQUAPORIN-8 | 79 | 286 | IPR034294 | - | |
Cla01g01451 | 286 | PANTHER | AQUAPORIN-8 | 3 | 49 | IPR034294 | - | |
Cla01g01451 | 286 | PANTHER | - | 3 | 49 | - | - | |
Cla01g01451 | 286 | PANTHER | - | 79 | 286 | - | - | |
Cla01g01451 | 286 | CDD | MIP | 21 | 267 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla01g01451 | 286 | ProSitePatterns | MIP family signature. | 113 | 121 | IPR022357 | - | |
Cla01g01451 | 286 | SUPERFAMILY | Aquaporin-like | 13 | 277 | IPR023271 | - | |
Cla01g01451 | 286 | TIGRFAM | MIP: MIP family channel proteins | 25 | 264 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla01g01451 | 286 | Gene3D | Glycerol uptake facilitator protein. | 5 | 272 | IPR023271 | - | |
Cla01g01451 | 286 | Pfam | Major intrinsic protein | 14 | 264 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g01451 | Cla-Chr1:29009237 | Cla09g01964 | Cla-Chr9:37240084 | 3.32E-92 | dispersed | |
Cla01g01451 | Cla-Chr1:29009237 | Cla10g01892 | Cla-Chr10:34818950 | 2.37E-92 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla01g01451 | K09873 | - | csv:101208863 | 495.738 |