Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g01537 ATGGGTTCTAACAAGCCTTACATTGTTGCAATTTTCATCCAAATTACCTTTGCCGGGATGAGCCTAATGTCCAAGGCTGCCTTTGCTGGCGGTATGAACACTTATATCTTCCTCTTTTATCGTCAAGCTGCCGGTAGTATCATCTTACTCCCACTCACTCTACTCTTAAAAGGGAAGGAGAAGAGGCCATTGTCTTTCAAGCATCTTTGCCAGATTTTTGTCATTTCATTGATAGGGATGGAGAAGGTGAAACTAAAGAAAGCAGCAGGGATTGCAAAGGTAGTGGGGATAATGATATGCATGGGAGGTGCAGCCATTCTTGCTTTCTACAAAGGACCCTATTTGAAGCCACTTTTCACTCACCAACTTTTCCACCATCTCCAATCTCAATCCCACCATTCTTCTAAATCCCAAAACACATGGATGATTGGCTGTTTCTTCCTTCTCATCACTAGTGTTTCTTGGGGCATTTGGTTTGTTCTCCAGGCTAAGTTCTTGAAGGGGTACCCTCACCCGATGGAATTCATGTGCATGCAAACAGTGATGAGTATGGTTCAAAGCTTTGTTGTAGCTATTGTAATGGAAAGAGATCCTTTGGAGTGGAAATTGGGCTGGAACATTAGACTATTTGCTGTGCTCTATTGTGGTATTTTGGTAATTGGTATTGCAAACAATGCCCAATGTTGGGTAATTAGAGAGAAGGGTCCAGTTTTCCAAGCCATGACGACGCCCTTGAATTTAATCACAACAATAATCGGTTCCCAATTACTATTTTCCGAAGGAATTTACTTGGGAAGCATTATAGGTGCATCATTGTTGGTAATGAGTCTTTACAGTGTTTTGTGGGGAAAAAGCAAAGAGCTTATCACTCCTCCTCCAAATGACCACCAACTATCCCCAACACAAAAACAGATTGAAGAATCGACATGTCGTACTGAAGTCAACTCCTCATTAGATGANAATGCCTATGGTGTGGCTGTTGATTATACATCTGCAAATTTGGGTGCTGCTGCATTTAATTGCCTCCCTGTCACAACATTTCTCTTTGCTGTTTTATTAAGGATGGAGAAAGTAAACTTGAGAACAGTGGCTGGAATGGCAAAGGCTTTTGGAATATTAGTTTGCATTGGAGGAGTGATCACACTTGCATTCTACAAAGGCTCATTTTCTCAAGACTTATCCATCACCATTGGAGGAGTTCTTGTAACTGTTGTTTCAAATATATTACAATGTTGGGTAATCAAAGAGAAGGGGCCAGTTTTTCAAGCCATGACAACGCCATTGAATGTGATTGCTACTATTATTGGCTCTGAATTGCTATTGGGTGAAGGAATCAACTTGGGAAGTCTCATTGGTGCAATTTTGTTGGTGCTTAGCCTTTACAGTGTATTATGGGGGAAAAGCAAAGAGCTAAGCATTATTGATAGAGATAATAATAATCAAACAGATGTATTCGTTCCACCTCAGTTACCAAAAGATTTGACAGAAATGAGATCACCTGCTGAGCCATAG 1512 40.74 MGSNKPYIVAIFIQITFAGMSLMSKAAFAGGMNTYIFLFYRQAAGSIILLPLTLLLKGKEKRPLSFKHLCQIFVISLIGMEKVKLKKAAGIAKVVGIMICMGGAAILAFYKGPYLKPLFTHQLFHHLQSQSHHSSKSQNTWMIGCFFLLITSVSWGIWFVLQAKFLKGYPHPMEFMCMQTVMSMVQSFVVAIVMERDPLEWKLGWNIRLFAVLYCGILVIGIANNAQCWVIREKGPVFQAMTTPLNLITTIIGSQLLFSEGIYLGSIIGASLLVMSLYSVLWGKSKELITPPPNDHQLSPTQKQIEESTCRTEVNSSLDXNAYGVAVDYTSANLGAAAFNCLPVTTFLFAVLLRMEKVNLRTVAGMAKAFGILVCIGGVITLAFYKGSFSQDLSITIGGVLVTVVSNILQCWVIKEKGPVFQAMTTPLNVIATIIGSELLLGEGINLGSLIGAILLVLSLYSVLWGKSKELSIIDRDNNNQTDVFVPPQLPKDLTEMRSPAEP 503
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 29966743 29984292 - ClCG01G015700.1 Cla01g01537 265126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g01537 503 PANTHER WAT1-RELATED PROTEIN 5 80 - -
Cla01g01537 503 Pfam EamA-like transporter family 142 281 IPR000620 GO:0016020|GO:0016021
Cla01g01537 503 PANTHER WAT1-RELATED PROTEIN 313 389 IPR030184 GO:0016021|GO:0022857
Cla01g01537 503 PANTHER WAT1-RELATED PROTEIN 5 80 IPR030184 GO:0016021|GO:0022857
Cla01g01537 503 SUPERFAMILY Multidrug resistance efflux transporter EmrE 376 468 - -
Cla01g01537 503 PANTHER WAT1-RELATED PROTEIN 394 478 - -
Cla01g01537 503 PANTHER WAT1-RELATED PROTEIN 77 293 - -
Cla01g01537 503 PANTHER WAT1-RELATED PROTEIN 313 389 - -
Cla01g01537 503 PANTHER WAT1-RELATED PROTEIN 394 478 IPR030184 GO:0016021|GO:0022857
Cla01g01537 503 PANTHER WAT1-RELATED PROTEIN 77 293 IPR030184 GO:0016021|GO:0022857
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla01g01537 Cla02g00077 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01537 Cla-Chr1:29966743 Cla08g00712 Cla-Chr8:19390302 1.61E-15 dispersed
Cla01g01535 Cla-Chr1:29929329 Cla01g01537 Cla-Chr1:29966743 4.15E-23 proximal
Cla01g01537 Cla-Chr1:29966743 Cla01g01538 Cla-Chr1:30001320 2.85E-26 tandem
Cla01g01537 Cla-Chr1:29966743 Cla02g00077 Cla-Chr2:769400 7.98E-14 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g01537 - - csv:101205842 504.212