Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g01557 ATGATACCCTCTTTCCCATCTTCTTCAAATTCCTTTCTGAGGGTTTTTTTCTTCTTTGTCTCTCTTACTCTTCTCTCCTTCTCTGCCTCCTCTGTTACTCCCTCTTCTTCTTCTCATGGAGACACCCAGAAACTCGTATCCTTCAAATCTTCACTTCCAAACCCAACCCTTCTTCAGAACTGGCTCTCCAATGCCGACCCATGTTCGTTTTCTGGTATTACTTGTAAGGAAACCAGAGTCTCCGCTATAGACTTGAGCTTCTTGTCTTTGAGCTCTAATTTCAGTCATGTGTTTCCTTTGCTTGCGGCTCTTGACCATTTGGAATCGCTTTCTCTTAAATCCACTAACCTCACTGGCTCCATTTCTTTGCCCTCTGGATTCAAGTGTAGCCCTCTTCTTTCTTCTGTAGATCTGTCTCTCAATGCCTTGTTTGGTTCTGTTTCTGATGTCTCCAACTTGGGGTTTTGCCCCAATGTTAAGTCGCTTAATCTGTCCTTTAACTCTTTTGATTTTCCTCTTAAAGACTCTGCCCCTGGATTGAAGCTTGATTTGCAGGTTCTTGATCTTTCTTCTAATCGGATTGTTGGGTCTAAATTAGTTCCATGGATTTTCTCTGGTGGGTGTGGTAATTTGCAGCACTTGGCATTGAAGGGAAACAAAATCAGCGGCGAGATTAATCTATCATCTTGTAATAAACTCGAGCATTTGGATATCTCTGGCAACAATTTCTCTGTGGGTATTCCGTCCTTAGGTGATTGCTCTGTTTTGGAACATTTTGATATCTCCGGCAATAAGTTTACCGGCGACGTCGGACATGCTCTGTCGTCTTGTCAGCAACTCACCTTTCTGAATCTCTCCAGCAACCAGTTCGGGGGGCCAATCCCTCAGTTTGCATCGTCCAATTTGTGGTTTCTTTCACTTGCTAACAACGATTTCCAAGGGGAGATTCCTGTAAGTATTGCAGATTTGTGTTCTAGTTTGGTAGAGCTCGATCTTTCTTCTAATAGTTTGATTGGGGCTTTGCCTACGGCTTTGGGGTCTTGTTCTTCGTTGCAAACTTTAGACATTTCGAAAAATAATCTCACTGGTGAACTCCCCATTGCCGTTTTTGCCAAAATGAGTAGTCTCAAGAAACTCTCTGTTTCAGACAACAAGTTTTTTGGGGTTTTGTCAGATTCTCTGTCTCAGCTCGCCATTTTGAATTCTTTGGATCTGAGTTCCAATAACTTTTCTGGGTCGATTCCGGCGGGGCTATGTAAAGACCCTAATAACAACTTGAAAGAACTGTTTCTTCAGAACAATTGGTTAACAGGTCGAATCCCTGCGAGTATTAGTAATTGTTCACAGCTGGTTTCTCTTGATTTGAGCTTCAACTTTCTTAGTGGGACGATCCCTTCCAGCTTGGGATCGCTTTCTAAGCTTAAGAACTTGATTATGTGGTTGAATCAGCTGGAGGGGGAGATTCCATCGGATTTTAGCAACTTTCAAGGGCTCGAGAATCTGATCCTGGATTTCAATGAGCTCACTGGGACCATCCCTTCCGGGTTAAGCAACTGTACCAACTTGAACTGGATTTCATTGTCGAACAACCGGTTGAGTGGAGAGATTCCCGCCTGGATTGGAAGTTTACCAAGCCTTGCCATCCTTAAGCTCAGCAACAACTCGTTCTACGGTAGGATTCCTCGGGAGCTCGGCGATTGTCGGAGCTTGATCTGGCTTGACCTTAATACCAATCTCTTGAATGGAACAATCCCCCCGGAGCTGTTTCGTCAATCGGGTAACATTGCTGTTAACTTTATCACAGGGAAGTCTTATGCTTACATTAAGAATGATGGTAGTAAGCAGTGCCATGGAGCTGGAAATTTGCTTGAGTTTTCTGGAATAAGACAGGAACAAGTGAACAGGATTTCAAGCAAGAGTCCTTGCAATTTCACTAGGGTTTATAAAGGAATGACTCAGCCCACTTTTAACCATAATGGCTCCATGATCTTTCTTGATCTTTCCCACAATATGTTGTCTGGTAGTATTCCTAAGGAGATTGGTTCTACAAACTATCTCTACATTTTGGATTTGGGACATAACAGTCTCTCGGGACCGATTCCGCAGGAGCTCGGCGACTTGACGAAACTTAACATTCTTGATCTCTCAGGCAATGAGCTTGAAGGATCAATTCCATTGTCTTTGACAGGACTTTCCTCCCTCATGGAGATTGATCTGTCCAACAATCATCTCAATGGTTCGATACCCGAATCAGCTCAGTTTGAAACATTCCCGGCATCTGGTTTTGCGAATAATTCTGGCCTCTGTGGGTATCCTCTCCCTCCATGTGTGGTTGATTCAGCAGCAAATGCAAATTCTCAGCATCAAAGATCTCATAGGAAACAGGCATCCCTTGCAGGGAGTGTTGCAATGGGGTTACTCTTCTCCCTCTTCTGTATTTTCGGTCTGATTATCGTCGTTATCGAGATGAGGAAGAGAAGGAAAAAGAAGGATTCTACTCTTGATTCTTATGTTGAGAGTCATTCCCAATCAGGCACAACCACCGCCGTTAACTGGAAGTTAACGGGTGCCCGTGAAGCATTGAGCATCAATCTTGCAACGTTTGAGAAGCCATTAAGAAAGCTTACATTCGCTGATCTTCTCGAAGCTACTAATGGCTTCCACAACGATAGCCTGATTGGTTCGGGGGGTTTCGGTGACGTATATAAGGCTCAATTGAAGGATGGAAGCACTGTAGCCATCAAGAAGTTAATTCATGTCAGTGGTCAGGGTGATCGAGAGTTCACTGCAGAAATGGAAACCATTGGCAAAATCAAACACCGAAACCTGGTACCGCTTTTAGGCTACTGTAAAGTAGGAGAAGAACGGCTTCTGGTATACGAGTACATGAAATATGGAAGCCTGGAAGACGTTTTACACGACCAGAAGAAAGGCGGGATCAAACTGAATTGGGCAGCAAGAAGAAAAATTGCCATTGGAGCTGCAAGGGGACTGGCTTTCCTTCACCACAATTGCATCCCTCACATCATTCATAGGGACATGAAATCAAGCAATGTCTTACTGGATGAGAATTTGGAAGCCAGAGTCTCAGATTTTGGAATGGCAAGACTAATGAGTGCCATGGACACTCATTTGAGTGTCAGCACATTAGCTGGAACACCTGGTTATGTCCCTCCCGAATATTACCAAAGCTTCCGGTGTTCTACAAAAGGCGACGTTTACAGTTACGGTGTCGTTATGCTCGAGCTCTTAACAGGAAAACGACCTACAGACTCTGCAGATTTCGGAGACAACAATCTCGTTGGATGGGTAAAACAACACGCCAAGTTGGACCCAACCGATGTTTTCGATCCAGAACTCATAAAGGAGGATCCAAGCCTCAAGTTAGAGCTTTTAGAACACTTGAAGGTAGCTGTTTCTTGCTTAGACGATAGGTCATGGCGGCGTCCAACCATGATCCAGGTAATGACAATGTTCAAGGAAATCCAAGCAGGGTCGGGGATGGATTCACAATCTACGATCGGAACCGACAACGGAGGATTCAGTGTCGACATGGTAGATATGAGCTTAAAAGAAGTACCAGAGCCAGAAGGCAAGTAA 3600 44.17 MIPSFPSSSNSFLRVFFFFVSLTLLSFSASSVTPSSSSHGDTQKLVSFKSSLPNPTLLQNWLSNADPCSFSGITCKETRVSAIDLSFLSLSSNFSHVFPLLAALDHLESLSLKSTNLTGSISLPSGFKCSPLLSSVDLSLNALFGSVSDVSNLGFCPNVKSLNLSFNSFDFPLKDSAPGLKLDLQVLDLSSNRIVGSKLVPWIFSGGCGNLQHLALKGNKISGEINLSSCNKLEHLDISGNNFSVGIPSLGDCSVLEHFDISGNKFTGDVGHALSSCQQLTFLNLSSNQFGGPIPQFASSNLWFLSLANNDFQGEIPVSIADLCSSLVELDLSSNSLIGALPTALGSCSSLQTLDISKNNLTGELPIAVFAKMSSLKKLSVSDNKFFGVLSDSLSQLAILNSLDLSSNNFSGSIPAGLCKDPNNNLKELFLQNNWLTGRIPASISNCSQLVSLDLSFNFLSGTIPSSLGSLSKLKNLIMWLNQLEGEIPSDFSNFQGLENLILDFNELTGTIPSGLSNCTNLNWISLSNNRLSGEIPAWIGSLPSLAILKLSNNSFYGRIPRELGDCRSLIWLDLNTNLLNGTIPPELFRQSGNIAVNFITGKSYAYIKNDGSKQCHGAGNLLEFSGIRQEQVNRISSKSPCNFTRVYKGMTQPTFNHNGSMIFLDLSHNMLSGSIPKEIGSTNYLYILDLGHNSLSGPIPQELGDLTKLNILDLSGNELEGSIPLSLTGLSSLMEIDLSNNHLNGSIPESAQFETFPASGFANNSGLCGYPLPPCVVDSAANANSQHQRSHRKQASLAGSVAMGLLFSLFCIFGLIIVVIEMRKRRKKKDSTLDSYVESHSQSGTTTAVNWKLTGAREALSINLATFEKPLRKLTFADLLEATNGFHNDSLIGSGGFGDVYKAQLKDGSTVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDQKKGGIKLNWAARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVMLELLTGKRPTDSADFGDNNLVGWVKQHAKLDPTDVFDPELIKEDPSLKLELLEHLKVAVSCLDDRSWRRPTMIQVMTMFKEIQAGSGMDSQSTIGTDNGGFSVDMVDMSLKEVPEPEGK 1199
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 30210928 30214527 + ClCG01G015910.1 Cla01g01557 265146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g01557 1199 ProSiteProfiles Protein kinase domain profile. 887 1162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla01g01557 1199 CDD STKc_IRAK 893 1162 - -
Cla01g01557 1199 Pfam Leucine Rich Repeat 232 249 IPR001611 GO:0005515
Cla01g01557 1199 Pfam Leucine Rich Repeat 425 447 IPR001611 GO:0005515
Cla01g01557 1199 Pfam Leucine Rich Repeat 450 471 IPR001611 GO:0005515
Cla01g01557 1199 SUPERFAMILY L domain-like 653 772 - -
Cla01g01557 1199 SMART serkin_6 887 1159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla01g01557 1199 Gene3D Phosphorylase Kinase; domain 1 848 962 - -
Cla01g01557 1199 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1009 1021 IPR008271 GO:0004672|GO:0006468
Cla01g01557 1199 SUPERFAMILY L domain-like 205 589 - -
Cla01g01557 1199 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 15 1174 - -
Cla01g01557 1199 Gene3D - 598 658 - -
Cla01g01557 1199 Pfam Brassinosteroid receptor island domain 593 657 IPR045381 -
Cla01g01557 1199 SMART LRR_typ_2 373 396 IPR003591 -
Cla01g01557 1199 SMART LRR_typ_2 349 372 IPR003591 -
Cla01g01557 1199 SMART LRR_typ_2 568 591 IPR003591 -
Cla01g01557 1199 SMART LRR_typ_2 324 348 IPR003591 -
Cla01g01557 1199 SMART LRR_typ_2 731 754 IPR003591 -
Cla01g01557 1199 SMART LRR_typ_2 707 730 IPR003591 -
Cla01g01557 1199 SMART LRR_typ_2 543 567 IPR003591 -
Cla01g01557 1199 SMART LRR_typ_2 397 421 IPR003591 -
Cla01g01557 1199 SMART LRR_typ_2 495 519 IPR003591 -
Cla01g01557 1199 SMART LRR_typ_2 184 206 IPR003591 -
Cla01g01557 1199 Gene3D Ribonuclease Inhibitor 45 776 IPR032675 -
Cla01g01557 1199 Pfam Leucine rich repeat N-terminal domain 40 75 IPR013210 -
Cla01g01557 1199 Pfam Leucine rich repeat 686 744 IPR001611 GO:0005515
Cla01g01557 1199 Pfam Leucine rich repeat 497 555 IPR001611 GO:0005515
Cla01g01557 1199 Pfam Leucine rich repeat 350 410 IPR001611 GO:0005515
Cla01g01557 1199 PRINTS Leucine-rich repeat signature 351 364 - -
Cla01g01557 1199 PRINTS Leucine-rich repeat signature 707 720 - -
Cla01g01557 1199 SUPERFAMILY L domain-like 38 297 - -
Cla01g01557 1199 Pfam Protein kinase domain 887 1156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla01g01557 1199 Gene3D Transferase(Phosphotransferase) domain 1 963 1164 - -
Cla01g01557 1199 ProSitePatterns Protein kinases ATP-binding region signature. 893 916 IPR017441 GO:0005524
Cla01g01557 1199 PANTHER SYSTEMIN RECEPTOR SR160 15 1174 - -
Cla01g01557 1199 SUPERFAMILY Protein kinase-like (PK-like) 873 1163 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g00665 Cla-Chr1:7877610 Cla01g01557 Cla-Chr1:30210928 0 dispersed
Cla01g01557 Cla-Chr1:30210928 Cla05g00864 Cla-Chr5:8569756 7.08E-67 dispersed
Cla01g01557 Cla-Chr1:30210928 Cla05g00374 Cla-Chr5:3422514 2.61E-147 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80266 PF00069 Pkinase 4.20E-45 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g01557 K13415 - csv:101209118 2257.26