Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g01574 ATGGCTTCCAATGATTTTTCAGCCATTCTTTTTGCTTTGATAATTCCCTTTCTTTTCATCATTTTCTCTCGTGTTTGGAGGTGGAATTTCCATGGAGTCGTTCCTTGGAACTGGCCAATCCTGGGTATGACGCCCACTGTTGTTGCTCATATCCATCGACCTCATGATCGTATTACTGAAGTCTTACAAGAAGTTGGTTCCACTTTCTTCTTCAAAGGCATTTGGTTTTCAGGTATGGACTTCCTTTTCACAGTTGACCCTTCAAATATCCACCATATTTTGAGTGCCAATTTCAACCGATATCCAAAAGGCCCTGATTTCAAGTATATTTTTGATGTTTTGGGAGATGGGATTTTCAACTCTGATTCAGATGTTTGGAAGAATCAACGTAAAACCGCTCATTCTTTGGTACACCATGAGAATTTTCTTCAATTCTTGGAGAAAATTACATTGAAGAAAGTGAAGGAAGGGCTGGTTCCGGTGCTTGAAAGTGTTTGTGAAAATGGGTCGGTGTTGGATTTGCAAGATTTGTTTCAGAGATTCTCCTTTGATTCAACTTGTATGTTGGTCACTGGCTTCGACCTCCACAGTTTATCTCTTGAATTCCCTCAAGTGCCTTTCTCCAAAGCCATGGATGATGCAGAGGAAGTGATTTTTCTTCGACATATTTTCCCTAAAAGAATATGGGAATTTCAGAAGAAACTCAAAATTGGACAACCCAAGAGGCTGAAACAAGCTTGGGAAATCATAGATGAAACCATCGCCAAGTTGATAGCCTCCAAAAGGGAAAGCTTGAGAAATCAGGTGAAAGAAGAGGGAGATCAGCAAGGAGGAGGAGTTGATTTGATCACATCATATATTACAAATACAAACAAAGATGACAAATTTTTGAGAGATACAGTCTTAAATTTTATGATCGCTGGTAGAGACACTCTGAGTTCTGCTCTCTCCTGGTTTTTCTTTTGTCTTTCAAACAATCCAAACATTGTAGCAAAGATTAGAGAAGAGTTCAAAACAACGATTCCAACGAATGAAGCTCGAGATCAATCCCGGATATTTTCGATTGAAGAGGTGGATAAGTTAGTTTACTTCCATGGAACTTTGTGTGAAACTCTTAGACTATATCCTCCGGTCCCACTACAACACAAGGTATCAGTACAACATGATATCCTCCCAAGTGGTCATCACATAAATCCCAAAACAAAGATTTTGTTTTCTTTATATGCATTGGGAAGAATGAGTGATGTGTGGGGGAAAGATTGCATGAAGTTCAAGCCAGAGAGATGGATTTCAGAAAAGGGAGGAATCAAACATGTGCCATCTTACAAATTTTTGGCCTTTAATGCTGGGCCAAGAACTTGCTTGGGAAAACAAGTAGCTTTCGTTGAGTTGAAAATAGTTGCAGCTGCTATTATTCACAACTATGATATTATTCAACAAATAGAGCATGAAGTTGTTCCAAATGCTTCCATTATTCTTCATATGAAGCATGGATTCAAGATGACCACAAAGCTTTTCAATGTTCTGAAATGTTCTTCTATTACGCTCGAGCCAAATGCACCAGAGGGTCGTAGAGATGATGTTGCTCCTCATGATGAGGCACGAATATGGTTTTTTAGGGACTTTACGCTGAAAAGTCCGTTTGGGGGAAAGGTTCCAAGATACTGTGTCTTTACCTGCATCAAAGGAGGGGGGCGACCAATGGTTGGATAA 1713 39.58 MASNDFSAILFALIIPFLFIIFSRVWRWNFHGVVPWNWPILGMTPTVVAHIHRPHDRITEVLQEVGSTFFFKGIWFSGMDFLFTVDPSNIHHILSANFNRYPKGPDFKYIFDVLGDGIFNSDSDVWKNQRKTAHSLVHHENFLQFLEKITLKKVKEGLVPVLESVCENGSVLDLQDLFQRFSFDSTCMLVTGFDLHSLSLEFPQVPFSKAMDDAEEVIFLRHIFPKRIWEFQKKLKIGQPKRLKQAWEIIDETIAKLIASKRESLRNQVKEEGDQQGGGVDLITSYITNTNKDDKFLRDTVLNFMIAGRDTLSSALSWFFFCLSNNPNIVAKIREEFKTTIPTNEARDQSRIFSIEEVDKLVYFHGTLCETLRLYPPVPLQHKVSVQHDILPSGHHINPKTKILFSLYALGRMSDVWGKDCMKFKPERWISEKGGIKHVPSYKFLAFNAGPRTCLGKQVAFVELKIVAAAIIHNYDIIQQIEHEVVPNASIILHMKHGFKMTTKLFNVLKCSSITLEPNAPEGRRDDVAPHDEARIWFFRDFTLKSPFGGKVPRYCVFTCIKGGGRPMVG 570
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 30409931 30413455 + ClCG01G016090.1 Cla01g01574 265163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g01574 570 PRINTS E-class P450 group IV signature 361 377 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01574 570 PRINTS E-class P450 group IV signature 438 454 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01574 570 PRINTS E-class P450 group IV signature 454 472 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01574 570 PRINTS E-class P450 group IV signature 298 324 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01574 570 PRINTS E-class P450 group IV signature 412 430 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01574 570 SUPERFAMILY Cytochrome P450 35 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01574 570 Pfam Cytochrome P450 37 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01574 570 Gene3D Cytochrome P450 33 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01574 570 PANTHER CYTOCHROME P450 19 503 - -
Cla01g01574 570 PANTHER ALKANE HYDROXYLASE MAH1-LIKE 19 503 - -
Cla01g01574 570 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Cla01g01574 570 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01574 570 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01574 570 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01574 570 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01571 Cla-Chr1:30368400 Cla01g01574 Cla-Chr1:30409931 0 dispersed
Cla01g01572 Cla-Chr1:30383900 Cla01g01574 Cla-Chr1:30409931 0 dispersed
Cla01g01574 Cla-Chr1:30409931 Cla01g01578 Cla-Chr1:30449523 0 dispersed
Cla01g01576 Cla-Chr1:30435621 Cla01g01574 Cla-Chr1:30409931 7.12E-57 dispersed
Cla01g01577 Cla-Chr1:30436638 Cla01g01574 Cla-Chr1:30409931 1.17E-81 dispersed
Cla01g01574 Cla-Chr1:30409931 Cla01g01575 Cla-Chr1:30426441 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g01574 - - csv:101218649 887.486