Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g01577 ATGAAGCTCGAGATGAATGGCGGATATTTTCGATTGAAGAGACATAAGTTAGTTTACTTCCATGGAACTTTGTGTGAAGCTCTTAGACTATATCCTCCAATCCCAATCAATCACAAGGTGGTTGTACAACATGATATCCTCCCAAGTGGTCATCGCATAAATCTCAAAATGAAGATATTGTTGTCTATATATGCATTGGGAAGAATGAGTGTTGTGTGGGGAAAAGATTGCATGGAGTTCAAGCCAGAGAGATGGATTTCAGAAAAGGGAAAGATCAAACATGTGCCATCTTACAAATTCTTGGCCTTCAATCCTGGGCCAAGAACTTGTTTGGGAAAACAAGTGGCTTTCACTGAGTTGAAAATCGTTGCAGATGCCATTATTCATAACTACAAGATTATTCAACAAAAAGGACACCAAGTTGTTCCAAAGGCTTCCGTTGTTCTTCATATGAAGCATGGTTTCAAGGCCAGGATTATAAGGAGATGGACTTGA 495 39.39 MKLEMNGGYFRLKRHKLVYFHGTLCEALRLYPPIPINHKVVVQHDILPSGHRINLKMKILLSIYALGRMSVVWGKDCMEFKPERWISEKGKIKHVPSYKFLAFNPGPRTCLGKQVAFTELKIVADAIIHNYKIIQQKGHQVVPKASVVLHMKHGFKARIIRRWT 164
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 30436638 30437132 + ClCG01G016115.1 Cla01g01577 265166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g01577 164 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 103 112 IPR017972 GO:0005506|GO:0016705
Cla01g01577 164 Pfam Cytochrome P450 14 146 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01577 164 SUPERFAMILY Cytochrome P450 14 162 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01577 164 PRINTS E-class P450 group I signature 21 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01577 164 PRINTS E-class P450 group I signature 100 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01577 164 PRINTS E-class P450 group I signature 110 133 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01577 164 PANTHER CYTOCHROME P450-RELATED 15 162 - -
Cla01g01577 164 PANTHER CYTOCHROME P450 15 162 - -
Cla01g01577 164 Gene3D Cytochrome P450 11 163 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01577 Cla-Chr1:30436638 Cla01g01574 Cla-Chr1:30409931 1.17E-81 dispersed
Cla01g01577 Cla-Chr1:30436638 Cla01g01578 Cla-Chr1:30449523 3.97E-81 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g01577 - - csv:101218649 258.07