Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla01g01594 | ATGGGAATCGCTAAAGGTCCATTAATTTTGTCCAATAAGGCAACTAGTTGTGCCAATTCTTCTATGTCCCACGATTATCATCATCATCATCATCAAGGAATCTTCACCTTCTCTAATGGCACCTTGGATAAATCCAATTCCTCCACCCTCCCTCAACACATCCGCCCTGAGAAGCTCCGACTCGACGCCTTCTCCGCCCCGATTCCGCCATCTACGGTGGCCGAAATAGACGAACACCACCCCCACCACCATCACCAACAACAACTTCATCATGTCTATGCCACCACACCTAGTGGGGGGACCATGTTATCCGACATGTTCAATTTCCCTCCAACAACTCCCTCCGCCCCCGTTCCCGTCGAATTCTCCGACAATTTCCGAACTTTACGCCCTCCCAACTCGGCCTCGGCCATGCAACTTTTCTTGATGAACCCTCCTCCACCACCACAACCCCAACCGCGATCTCCATCGCCACCTTCTACCTCCTCCACTCTCCACATGCTCCTCCCGAACCCACCTGCGAACGCTCTTCAGGGTTTCGAAGGTGGGGTTGGTGTCGGAGATCAAACGGCTTTCGGTCAATTCGCTGTCGTCGAAAGTCAAGGTCTTTCACTCTCACTTCACTCTTCCTCTTTACAACACTTGGAGGACGCGGCCGCTGCTGCTGCCGCCGTCGCGAAAGCAGATGAATTGAGAATTAGGGATGGTGGGATTTTGTATAATTATAACAACAACAACAATCAAGTCCTTGATGGAGGCGATGGAGGAAGTGGATCAACATCATCAATTTTGCACTATTCTTTTAGAAATAATGAGAATTCTCCTCATAGCTTTCAAGCTCCACAAATAATGAATCCCAACCATCAAGTTCAAATTGGATTTGGGTCATCTTTAGGAGTTGTAAATGTGTTGAGGAATTCAAAATATGCCAAACCTGCACAAGAATTGCTTGAGGAGTTTTGTAGTGTTGGCAAAGTTCAATTGAAGAAAAACAAGTTCAATATTAAGCCAAACCCCGATACCGAAACCGCCACCACCTCTGCCGCCACTACCGGTGGCTCGACATCAAAGGATCAACCTCCCTTATCAGCTGCTGACAGAATTGAGCATCAACGGAGAAAGGTCAAACTATTGTCCATGCTTGATGAGGTCGAACGTAGGTACAACCTATATCGAGAGCAAATGCAAATGGTAGTGAACTCGTTCGACCTAGTCATGGGGTTCGGAGCAGCAGCGCCTTACACAACGTTGACGCAGAAGGCGATGTCGAGGCACTTTCGGTGCTTGAAAGACGCGATTGCCGAGCAGCTAAAGCAGAGCTACGAAGCGTTGGGGGAAAAAGGAGGGAATGGAGGGTCAGGAATAACAAAAGGAGAGACACCAAGATTGAAGCTTCTTGAACAAAGCCTTCGCCAACAAAGGGCTTTCCATCAAATGGGAATGATGGAACAAGAAGCTTGGAGGCCACAGCGTGGCCTTCCTGAAAGATCAGTCAACATTCTCAGGGCTTGGCTTTTCGAGCATTTTCTTCACCCGTACCCCAGCGACGCAGACAAGCTTCTGTTAGCTCGACAGACTGGTTTGTCCAGAAATCAGGTCTCGAATTGGTTCATTAATGCAAGAGTTCGGTTGTGGAAACCGATGGTGGAAGAAATGTACCAACTTGAAGGGAAAGTGGATACAGATGAATCACAAGATGACACCACACACAATAATAATAATAATAAAACCCAAAACAATCCCATAAATAATTCACAAAATCCAACACCCACCACTGCTCCACCACCCTCAGCCAGCACCGTGGAAGAAGTAGCGGCGGAGTTCACGGCGGCGCATGAGTACTCAGATCTTCATGATGTGTGGCGACATGGAAGTAGTGGAGATCATCAACAACATTATGGGACCATGTCTGAAGATGTTACAACTGCGGCGGCTGACATGCATCCTGGACCAACACTTATAAGATTTGGGACCACAAATACGGCCACCGGTGACGTGTCCCTAACTTTAGGCCTCCGCCACACCGGAAGTACCTCCGCCGCCGCCGCCGCAGATAACCCTTCTTTCTCCCTAAGAGACTTTGGTCACTCTTGA | 2094 | 48.52 | MGIAKGPLILSNKATSCANSSMSHDYHHHHHQGIFTFSNGTLDKSNSSTLPQHIRPEKLRLDAFSAPIPPSTVAEIDEHHPHHHHQQQLHHVYATTPSGGTMLSDMFNFPPTTPSAPVPVEFSDNFRTLRPPNSASAMQLFLMNPPPPPQPQPRSPSPPSTSSTLHMLLPNPPANALQGFEGGVGVGDQTAFGQFAVVESQGLSLSLHSSSLQHLEDAAAAAAAVAKADELRIRDGGILYNYNNNNNQVLDGGDGGSGSTSSILHYSFRNNENSPHSFQAPQIMNPNHQVQIGFGSSLGVVNVLRNSKYAKPAQELLEEFCSVGKVQLKKNKFNIKPNPDTETATTSAATTGGSTSKDQPPLSAADRIEHQRRKVKLLSMLDEVERRYNLYREQMQMVVNSFDLVMGFGAAAPYTTLTQKAMSRHFRCLKDAIAEQLKQSYEALGEKGGNGGSGITKGETPRLKLLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKLLLARQTGLSRNQVSNWFINARVRLWKPMVEEMYQLEGKVDTDESQDDTTHNNNNNKTQNNPINNSQNPTPTTAPPPSASTVEEVAAEFTAAHEYSDLHDVWRHGSSGDHQQHYGTMSEDVTTAAADMHPGPTLIRFGTTNTATGDVSLTLGLRHTGSTSAAAAADNPSFSLRDFGHS | 697 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 30651707 | 30657179 | + | ClCG01G016290.1 | Cla01g01594 | 265183 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla01g01594 | 697 | Pfam | Homeobox KN domain | 504 | 543 | IPR008422 | GO:0003677|GO:0006355 | |
Cla01g01594 | 697 | SMART | prehox3 | 298 | 435 | IPR006563 | - | |
Cla01g01594 | 697 | SMART | HOX_1 | 487 | 551 | IPR001356 | GO:0003677 | |
Cla01g01594 | 697 | MobiDBLite | consensus disorder prediction | 559 | 602 | - | - | |
Cla01g01594 | 697 | MobiDBLite | consensus disorder prediction | 333 | 364 | - | - | |
Cla01g01594 | 697 | Coils | Coil | 374 | 401 | - | - | |
Cla01g01594 | 697 | MobiDBLite | consensus disorder prediction | 140 | 166 | - | - | |
Cla01g01594 | 697 | MobiDBLite | consensus disorder prediction | 570 | 587 | - | - | |
Cla01g01594 | 697 | Pfam | Associated with HOX | 303 | 434 | IPR006563 | - | |
Cla01g01594 | 697 | ProSiteProfiles | 'Homeobox' domain profile. | 484 | 547 | IPR001356 | GO:0003677 | |
Cla01g01594 | 697 | MobiDBLite | consensus disorder prediction | 142 | 158 | - | - | |
Cla01g01594 | 697 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 83 | 680 | - | - | |
Cla01g01594 | 697 | SUPERFAMILY | Homeodomain-like | 488 | 555 | IPR009057 | - | |
Cla01g01594 | 697 | CDD | homeodomain | 487 | 548 | IPR001356 | GO:0003677 | |
Cla01g01594 | 697 | PANTHER | BEL1-LIKE HOMEODOMAIN PROTEIN 2 | 83 | 680 | - | - | |
Cla01g01594 | 697 | MobiDBLite | consensus disorder prediction | 337 | 361 | - | - | |
Cla01g01594 | 697 | Gene3D | - | 490 | 552 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g00239 | Cla-Chr1:2404412 | Cla01g01594 | Cla-Chr1:30651707 | 5.93E-84 | dispersed | |
Cla01g01594 | Cla-Chr1:30651707 | Cla10g01741 | Cla-Chr10:33296516 | 4.54E-85 | dispersed | |
Cla01g01594 | Cla-Chr1:30651707 | Cla02g01273 | Cla-Chr2:26728274 | 6.36E-23 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
60436 | PF07526 | POX | 1.30E-48 | No_clan | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla01g01594 | - | - | bhj:120073177 | 1050.04 |