Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g01620 ATGGATCTTGTCTCCTCAGGAGCTGCATGTGGTCTTCCAGATGACTTATTTGATAAATTAGCTGGACGATTGTTGGCTTTTGAGGAGTTTTACTGGTTTTTTCGCACTCGATGCAGAGTCAATGATGTTTACAGGTACAAAGCTGCTAACCAGAGAGCGATCGAAGCTCTGGAGAAGTTTGGAGCAACACTAATGGAAGTAGATGCTGACGGATCATTGTCATATCCGGACCCTCAGATAAATTCAAAAGATAATAGTAACCGCTCTTCTGCTGCTCTTTTGCAAGAACTTAAAACTTTTAACTTCTTTTTAATGTCAGCTGACAAACATTCTCGCTCCAAATCGTTGAGTATTGAAGAAGAGCAATTTATGCGAGTATTTTACGAAAACAAACTTCAAGAAGTATGCAACAACTTTCATTTTCCTCATAAAATCCAGGCAACAGCTCTAATATATTTTAAAAGATTCTACCTACAATGGTCCGTGATGCAGCATAATCCAAAAAATGTGATGTTAACCTGCATTTATGCAGCTTGTAAGATAGAAGAAAATCATGTCTCGGCTGAGGAGCTTGGTAAGGGGATTTCACAGGATCATCAAATTATTCTCAATTATGAGATGATAAGTCTGGAATTTGATCTTATTGTTTATGCACCTTACCGATCAGTTGAAGGCTATGTAAATGATATCGAGGAACTCTTCAATGAGAATGTTGAAATGCTTCAAATGCTAAAGGTAATTGCCCCATTGTTCAATGTAATTGATACTGCAGTATGGCAAACAGCATCATTAGAGGTTGATAAAATTATGTTAACAGATGCCCCACTTCTCTTCCCCCCTGGGCAGTTGGCACTGGCTGCATTGCGCAGATCAAATGAAGTTCATGGAGTTATTGACTTTGATAGCTACCTGGATAGTATCCTCTCTCGCCAGAATTCTGCACATACAATTTCCGAGCTCTACGAGCATATAAATTCAATTGAATCATTGGTTAATAGATATACATTCCCTTCAGAAAAGGATTTAAAGCACATCAACCGAAAACTAAAATCTTGCTGGGGGCTGGGCTCCAATGACGAGAGTAAGAAAAGGGAGAAGAAATCAAAGCACAAATCAAAGAAGAGTTCAAATGAAATACCAAATATGCCTTTGCACAATTAG 1161 38.42 MDLVSSGAACGLPDDLFDKLAGRLLAFEEFYWFFRTRCRVNDVYRYKAANQRAIEALEKFGATLMEVDADGSLSYPDPQINSKDNSNRSSAALLQELKTFNFFLMSADKHSRSKSLSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKNVMLTCIYAACKIEENHVSAEELGKGISQDHQIILNYEMISLEFDLIVYAPYRSVEGYVNDIEELFNENVEMLQMLKVIAPLFNVIDTAVWQTASLEVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVIDFDSYLDSILSRQNSAHTISELYEHINSIESLVNRYTFPSEKDLKHINRKLKSCWGLGSNDESKKREKKSKHKSKKSSNEIPNMPLHN 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 30967707 30978999 + ClCG01G016560.2 Cla01g01620 265209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g01620 386 SUPERFAMILY Cyclin-like 109 216 IPR036915 -
Cla01g01620 386 PANTHER CYCLIN 47 377 IPR043198 GO:0006357|GO:0016538
Cla01g01620 386 Pfam Cyclin C-terminal domain 219 331 IPR031658 -
Cla01g01620 386 Gene3D - 101 214 - -
Cla01g01620 386 PANTHER CYCLIN-H 47 377 - -
Cla01g01620 386 MobiDBLite consensus disorder prediction 355 386 - -
Cla01g01620 386 Gene3D - 217 333 - -
Cla01g01620 386 CDD CYCLIN 124 208 IPR013763 -
Cla01g01620 386 SMART cyclin_7 130 211 IPR013763 -
Cla01g01620 386 SUPERFAMILY Cyclin-like 219 354 IPR036915 -
Cla01g01620 386 Pfam Cyclin, N-terminal domain 116 189 IPR006671 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01620 Cla-Chr1:30967707 Cla02g00003 Cla-Chr2:71085 7.14E-09 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g01620 K06634 - csv:101220754 540.421