Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g01631 ATGCGTTGGTTGCGTAACATCTCCTTTACCCCTTCTTCAATGGTGAGAATTCCGGGAACTGGCACAGGTGGTGATTCTCCAACCAGAAGGACTACTACCAGAGGCTCCGACGATCATAATTATCGGGGAATTGTTTGGCGTTTTGGTGCCTCTAAGTATTCCCGCCATAGGAAGCTTCGGAACCTAAGCGGACGTGAACGCGACGCTACTTCTTTGGCTAAATGGTCCGATACTACGCCTGAGCCTGTCTCTTTGTCGCGATCGCCGAGTACTTCTGATGACCATGCCGTCCCCTTGCCGCTCCCGGAGGTTTCTCCCTTATTTCAGCGTCGTGAAGGAATCTCCAATTTGAATTCTGCAGGTGGAGATGGGGATTGCCCTCTTCCATCGCCCAAGGGTTGGCGTGGACGCGGTGGGGACGATCGCGATGTAGATAGAGATAGAACTACACCTCCTCATAAGATTGGGGGTGCGGCCTCCCCTACCGCTCCGATTAAAAGTATATCTGATTCCGGGGAAAAGCAGAAGAAAGAAGATCAGAATGAGACGAGGTCATCTGAGAGGGCGAATCAAGATGCAAGAGGATATCCTGAAAGTTCCCGGAACGGTTTTTGGATTGATGTTCCCAGTAGGAGTGCTCCTACTAGTCCTTATGCAAGTCCTACACTCAGTCCCCAAAGAAATAGGTCCGGTAACCTTTCAAATTTCTATCATGTGATTCCAGTAGGAAACCAAGGCTGGTCTTCACCTGAGCTACCAAGTTTCCCTTGTGCTGCTCCAGTTGGAAATCACGTCTGGTCTGCACCTGAGCTGCCATCCTCAGCAATGATGCGGGGGGTTCCTCCTGCGTTCTTTGATTGCTCCACTCTTAGTTCTGAGAGTTCTCCCATGCATAGCCCAAGAGGTAGAAGTCCAACAGGAGCTACGTCTCCATTGCACACCAAGATTTCCCTTGAAACACATGCTGTGCGCCGTGAAGGTTCTGGTCATGTCAGTGTCCACCCTTTACCTCTTCCCCCTGGAGTGCCAATGCCTTCAGCATCAATCCTATCAATGGCTTCACCATCAACCTCCATGCCTCTACAATCAACCCCTGTGCCTTCCCCATCAATTCCAATGCCTTCAGCATCATCCCCAATGGCTTCACCATCAACCCCAATGGCTTCACAATCAACCCCAATTACACAAGCTAACACCAAAACTGAGTCGACCTCAATGAAAAATAAATGGCAGAAAGGAAAGCTTATAGGCCGGGGCACATTTGGAAGTGTATATGTTGCTAGCAACAGAGAAAATGGAGCTTTATGTGCAATGAAGGAAGTTGAACTATTTCATGATGATCCGAAGTCAGCTGAATCTATAAAGCAATTAGAACAGGAGATCAAACTTCTGAGCCAGCTAAAGCATCCAAATATTGTCCAGTACTATGGTTGTGATAGTGTTGAAGATCGATTATATATATACCTGGAGTATGTTCATCCTGGTTCAATTAATAAATATGTTCGTGAACATTGTGGAGCCATGACAGAATCTGTTGTTCGAAATTTTACTTGGCACATTCTCTCAGGGTTGGCCTACTTGCACAGCACAAAGACTATACACCGGGACATTAAAGGTGCTAATTTGCTTGTAGACTCTTGTGGGGTTGTCAAGCTTGCTGACTTTGGAATGGCTAAACATCTTACAGGACAAGTTGCTGATCTCTCTCTAAAGGGAAGTCCATACTGGATGGCTCCTGAGGCTGCAGCTATGTTTAAGGTCATAAGAGATACCCCACCAATACCTGAAACCTTATCATATGAAGCCAGCGATTTCTTAAAATGCTGCTTTCAGAGAAATCCTGCAGAGAGACCGACTGCTGCAATGCTGCTTGAACATCCATTCATGAAAAACTTGCAGCATCCAGATGCTTCATCTTGCTCTCAGGCCGTTGCTGGGGCAAGTTTGATGGATAAATGCTATAGCCCAAGTAAACAATATTCAAGTAAATTTGATCAGTCTTCCATGCTTCCAAGCTCACAAAACTCCAAGGGAAATGTGATTGGCCCACCATCTCGTCATGAAACCTCTGACTTAACAGTAATGTCTCGTTATTCCCCCCGTTCTACCCTTGAGGCTCTTCCAATACTATCTCCTCCGCGCTCGGTTCCAAATGTGCACCATCTCGGTTCCCCTACAAATGTGGCCGGCCTGCCTCCAGCTTTGCTCGCACCTTCAATCGATGAGCATTTGGCAAGGGTGGTAAAGTATCCGCGAAAGCACAGCTTCATGACAAGAAGCCAGACTCAGATGCTGCGTCTAGTAGTTGTTCTTGCTGTTATGACTGCTCGGAAAGCTGGTTTCATTACTTGTGCTGTTGGGATGATTGTGAGTGTTAGATTAATTGGGATTAGCAACAATCTGTCGTTTCTTTAA 2415 46.87 MRWLRNISFTPSSMVRIPGTGTGGDSPTRRTTTRGSDDHNYRGIVWRFGASKYSRHRKLRNLSGRERDATSLAKWSDTTPEPVSLSRSPSTSDDHAVPLPLPEVSPLFQRREGISNLNSAGGDGDCPLPSPKGWRGRGGDDRDVDRDRTTPPHKIGGAASPTAPIKSISDSGEKQKKEDQNETRSSERANQDARGYPESSRNGFWIDVPSRSAPTSPYASPTLSPQRNRSGNLSNFYHVIPVGNQGWSSPELPSFPCAAPVGNHVWSAPELPSSAMMRGVPPAFFDCSTLSSESSPMHSPRGRSPTGATSPLHTKISLETHAVRREGSGHVSVHPLPLPPGVPMPSASILSMASPSTSMPLQSTPVPSPSIPMPSASSPMASPSTPMASQSTPITQANTKTESTSMKNKWQKGKLIGRGTFGSVYVASNRENGALCAMKEVELFHDDPKSAESIKQLEQEIKLLSQLKHPNIVQYYGCDSVEDRLYIYLEYVHPGSINKYVREHCGAMTESVVRNFTWHILSGLAYLHSTKTIHRDIKGANLLVDSCGVVKLADFGMAKHLTGQVADLSLKGSPYWMAPEAAAMFKVIRDTPPIPETLSYEASDFLKCCFQRNPAERPTAAMLLEHPFMKNLQHPDASSCSQAVAGASLMDKCYSPSKQYSSKFDQSSMLPSSQNSKGNVIGPPSRHETSDLTVMSRYSPRSTLEALPILSPPRSVPNVHHLGSPTNVAGLPPALLAPSIDEHLARVVKYPRKHSFMTRSQTQMLRLVVVLAVMTARKAGFITCAVGMIVSVRLIGISNNLSFL 804
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 31110216 31119222 + ClCG01G016660.2 Cla01g01631 265220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g01631 804 Gene3D Transferase(Phosphotransferase) domain 1 392 586 - -
Cla01g01631 804 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 581 - -
Cla01g01631 804 MobiDBLite consensus disorder prediction 64 229 - -
Cla01g01631 804 MobiDBLite consensus disorder prediction 73 93 - -
Cla01g01631 804 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 581 714 - -
Cla01g01631 804 MobiDBLite consensus disorder prediction 377 409 - -
Cla01g01631 804 MobiDBLite consensus disorder prediction 353 409 - -
Cla01g01631 804 ProSitePatterns Protein kinases ATP-binding region signature. 416 439 IPR017441 GO:0005524
Cla01g01631 804 MobiDBLite consensus disorder prediction 213 229 - -
Cla01g01631 804 MobiDBLite consensus disorder prediction 13 30 - -
Cla01g01631 804 Pfam Protein kinase domain 411 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla01g01631 804 MobiDBLite consensus disorder prediction 135 152 - -
Cla01g01631 804 MobiDBLite consensus disorder prediction 291 311 - -
Cla01g01631 804 Gene3D Transferase(Phosphotransferase) domain 1 587 676 - -
Cla01g01631 804 MobiDBLite consensus disorder prediction 664 694 - -
Cla01g01631 804 ProSiteProfiles Protein kinase domain profile. 410 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla01g01631 804 SUPERFAMILY Protein kinase-like (PK-like) 394 674 IPR011009 -
Cla01g01631 804 MobiDBLite consensus disorder prediction 664 683 - -
Cla01g01631 804 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5 1 581 - -
Cla01g01631 804 SMART serkin_6 410 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla01g01631 804 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5 581 714 - -
Cla01g01631 804 MobiDBLite consensus disorder prediction 170 191 - -
Cla01g01631 804 MobiDBLite consensus disorder prediction 13 39 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g00446 Cla-Chr1:4840377 Cla01g01631 Cla-Chr1:31110216 5.26E-88 dispersed
Cla01g01631 Cla-Chr1:31110216 Cla05g00892 Cla-Chr5:8826684 1.40E-89 dispersed
Cla01g01631 Cla-Chr1:31110216 Cla08g01536 Cla-Chr8:28087275 1.14E-107 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80270 PF00069 Pkinase 7.40E-46 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g01631 - - cmo:103484760 1196.8