Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g01632 ATGAAGGATAACTCCTCCAAATATGTTGTTTTCTTGCTTATAAGCTTCTTTTTCTTGAATCAGCTCCTTCTGTCCTCACAACTTGATTATAGGTTCTATGATGCCTCTTGCCCCAACCTAACAAGGATTATAAGATATGGCGTCTGGATGGCAGTTTCTAATGATACTAGGATGGCTGCTTCTCTCTTACGGCTTCATTTTCATGATTGCTTTGTCAACGGTTGTGATGGATCATTGTTGCTTGATGACACTAGCACATTTAGGGGGGAGAAAAATGCATTGCCGAATATGAACTCAGTTCGAGGCTATGAAGTCATTGATAATATAAAGGCTGTCTTAGAGAAAGTCTGCCCATATGTTGTCTCATGTACTGATATAGTAACTCTAGCAGCTAGAGAGGCTGTCTACCTTGCTGGGGGACCATTTTGGCAAATTCCACTTGGTCGCCGAGATGGCACGACAGCAAGCGAGAGTGAAGCCAATCAGCTGCCATCACCAGTTGAGCCATTGGAGAATATCATGGCGAAATTCACTTCGAAAGGGTTAGATATGAAGGATGTTGTTGCTCTCTCAGGTGCACACACTTTCGGATTTGCTCGGTGCATGATGTTCAAGCACAGGCTGTTCAACTTCGATGGCACTGGAAATCCCGATCCAGAACTCGACGTCATGCTGCGACAGAACTTACAGAGCAATTGTCCAAATCAAGATGACTCCAACAACAAATTTGCCCCCTTGGATGCCTACACGATCAACCGGTTCGACAATGTGTATTACAGGAACTTGGTGAACAAGTTGGGACTTCTGCAGTCAGACCAAGCTCTCATGAAAGATAATACAACTGCTTCTTTGGTGGTGAACTACAGCAGGTATCCATATCTGTTTTACAGGGACTTTGGAGCATCAATGGTGAAGCTGGCCAATACTGGGATCCTTACAGGCCAAAATGGGGAGATTAGGAAGAATTGCAGGATGGTGAACTAG 984 44.31 MKDNSSKYVVFLLISFFFLNQLLLSSQLDYRFYDASCPNLTRIIRYGVWMAVSNDTRMAASLLRLHFHDCFVNGCDGSLLLDDTSTFRGEKNALPNMNSVRGYEVIDNIKAVLEKVCPYVVSCTDIVTLAAREAVYLAGGPFWQIPLGRRDGTTASESEANQLPSPVEPLENIMAKFTSKGLDMKDVVALSGAHTFGFARCMMFKHRLFNFDGTGNPDPELDVMLRQNLQSNCPNQDDSNNKFAPLDAYTINRFDNVYYRNLVNKLGLLQSDQALMKDNTTASLVVNYSRYPYLFYRDFGASMVKLANTGILTGQNGEIRKNCRMVN 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 31121716 31123253 + ClCG01G016670.2 Cla01g01632 265221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g01632 327 CDD secretory_peroxidase 29 326 IPR033905 GO:0004601|GO:0042744
Cla01g01632 327 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Cla01g01632 327 PANTHER PEROXIDASE 13 326 - -
Cla01g01632 327 Pfam Peroxidase 50 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla01g01632 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Cla01g01632 327 ProSiteProfiles Plant heme peroxidase family profile. 27 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla01g01632 327 Gene3D - 31 327 - -
Cla01g01632 327 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla01g01632 327 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla01g01632 327 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla01g01632 327 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla01g01632 327 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla01g01632 327 Gene3D Peroxidase, domain 2 164 306 - -
Cla01g01632 327 PANTHER PEROXIDASE 72-RELATED 13 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla01g01632 327 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla01g01632 327 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla01g01632 327 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla01g01632 327 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla01g01632 327 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla01g01632 327 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla01g01632 327 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla01g01632 327 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla01g01632 327 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla01g01632 327 SUPERFAMILY Heme-dependent peroxidases 27 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01632 Cla-Chr1:31121716 Cla09g01713 Cla-Chr9:34292212 1.16E-130 dispersed
Cla02g01842 Cla-Chr2:33571663 Cla01g01632 Cla-Chr1:31121716 1.06E-86 transposed
Cla03g00385 Cla-Chr3:4437906 Cla01g01632 Cla-Chr1:31121716 1.70E-83 transposed
Cla01g01632 Cla-Chr1:31121716 Cla09g01712 Cla-Chr9:34289676 2.10E-66 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g01632 K00430 - csv:101218459 616.305