Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla01g01632 | ATGAAGGATAACTCCTCCAAATATGTTGTTTTCTTGCTTATAAGCTTCTTTTTCTTGAATCAGCTCCTTCTGTCCTCACAACTTGATTATAGGTTCTATGATGCCTCTTGCCCCAACCTAACAAGGATTATAAGATATGGCGTCTGGATGGCAGTTTCTAATGATACTAGGATGGCTGCTTCTCTCTTACGGCTTCATTTTCATGATTGCTTTGTCAACGGTTGTGATGGATCATTGTTGCTTGATGACACTAGCACATTTAGGGGGGAGAAAAATGCATTGCCGAATATGAACTCAGTTCGAGGCTATGAAGTCATTGATAATATAAAGGCTGTCTTAGAGAAAGTCTGCCCATATGTTGTCTCATGTACTGATATAGTAACTCTAGCAGCTAGAGAGGCTGTCTACCTTGCTGGGGGACCATTTTGGCAAATTCCACTTGGTCGCCGAGATGGCACGACAGCAAGCGAGAGTGAAGCCAATCAGCTGCCATCACCAGTTGAGCCATTGGAGAATATCATGGCGAAATTCACTTCGAAAGGGTTAGATATGAAGGATGTTGTTGCTCTCTCAGGTGCACACACTTTCGGATTTGCTCGGTGCATGATGTTCAAGCACAGGCTGTTCAACTTCGATGGCACTGGAAATCCCGATCCAGAACTCGACGTCATGCTGCGACAGAACTTACAGAGCAATTGTCCAAATCAAGATGACTCCAACAACAAATTTGCCCCCTTGGATGCCTACACGATCAACCGGTTCGACAATGTGTATTACAGGAACTTGGTGAACAAGTTGGGACTTCTGCAGTCAGACCAAGCTCTCATGAAAGATAATACAACTGCTTCTTTGGTGGTGAACTACAGCAGGTATCCATATCTGTTTTACAGGGACTTTGGAGCATCAATGGTGAAGCTGGCCAATACTGGGATCCTTACAGGCCAAAATGGGGAGATTAGGAAGAATTGCAGGATGGTGAACTAG | 984 | 44.31 | MKDNSSKYVVFLLISFFFLNQLLLSSQLDYRFYDASCPNLTRIIRYGVWMAVSNDTRMAASLLRLHFHDCFVNGCDGSLLLDDTSTFRGEKNALPNMNSVRGYEVIDNIKAVLEKVCPYVVSCTDIVTLAAREAVYLAGGPFWQIPLGRRDGTTASESEANQLPSPVEPLENIMAKFTSKGLDMKDVVALSGAHTFGFARCMMFKHRLFNFDGTGNPDPELDVMLRQNLQSNCPNQDDSNNKFAPLDAYTINRFDNVYYRNLVNKLGLLQSDQALMKDNTTASLVVNYSRYPYLFYRDFGASMVKLANTGILTGQNGEIRKNCRMVN | 327 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 31121716 | 31123253 | + | ClCG01G016670.2 | Cla01g01632 | 265221 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla01g01632 | 327 | CDD | secretory_peroxidase | 29 | 326 | IPR033905 | GO:0004601|GO:0042744 | |
Cla01g01632 | 327 | ProSitePatterns | Peroxidases active site signature. | 59 | 70 | IPR019794 | GO:0004601 | |
Cla01g01632 | 327 | PANTHER | PEROXIDASE | 13 | 326 | - | - | |
Cla01g01632 | 327 | Pfam | Peroxidase | 50 | 290 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01632 | 327 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 186 | 196 | IPR019793 | - | |
Cla01g01632 | 327 | ProSiteProfiles | Plant heme peroxidase family profile. | 27 | 327 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01632 | 327 | Gene3D | - | 31 | 327 | - | - | |
Cla01g01632 | 327 | PRINTS | Haem peroxidase superfamily signature | 59 | 73 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01632 | 327 | PRINTS | Haem peroxidase superfamily signature | 121 | 138 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01632 | 327 | PRINTS | Haem peroxidase superfamily signature | 139 | 151 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01632 | 327 | PRINTS | Haem peroxidase superfamily signature | 186 | 201 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01632 | 327 | PRINTS | Haem peroxidase superfamily signature | 247 | 262 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01632 | 327 | Gene3D | Peroxidase, domain 2 | 164 | 306 | - | - | |
Cla01g01632 | 327 | PANTHER | PEROXIDASE 72-RELATED | 13 | 326 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01632 | 327 | PRINTS | Plant peroxidase signature | 37 | 56 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01632 | 327 | PRINTS | Plant peroxidase signature | 61 | 81 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01632 | 327 | PRINTS | Plant peroxidase signature | 101 | 114 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01632 | 327 | PRINTS | Plant peroxidase signature | 120 | 130 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01632 | 327 | PRINTS | Plant peroxidase signature | 139 | 154 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01632 | 327 | PRINTS | Plant peroxidase signature | 185 | 197 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01632 | 327 | PRINTS | Plant peroxidase signature | 245 | 260 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01632 | 327 | PRINTS | Plant peroxidase signature | 261 | 278 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01632 | 327 | PRINTS | Plant peroxidase signature | 301 | 314 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01632 | 327 | SUPERFAMILY | Heme-dependent peroxidases | 27 | 327 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g01632 | Cla-Chr1:31121716 | Cla09g01713 | Cla-Chr9:34292212 | 1.16E-130 | dispersed | |
Cla02g01842 | Cla-Chr2:33571663 | Cla01g01632 | Cla-Chr1:31121716 | 1.06E-86 | transposed | |
Cla03g00385 | Cla-Chr3:4437906 | Cla01g01632 | Cla-Chr1:31121716 | 1.70E-83 | transposed | |
Cla01g01632 | Cla-Chr1:31121716 | Cla09g01712 | Cla-Chr9:34289676 | 2.10E-66 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla01g01632 | K00430 | - | csv:101218459 | 616.305 |