Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g01655 ATGTCTGATCACAAATCAGGCTCCATGGCCGATCAGCTCTCTAAGCAGACCTCTATTTTTGGCCTACGCTTGTGGGTTGTTCTTGGGGTTTGTGTTGGAGCCGCTTTTGTGCTCTTTCTGTTTCTAATTTCTCTTTGGATTGCTTCTAAACGCTCCCGCAAGAAGATTTCTCACAGACCCACTATCCCAATCGTCTCCAAAGAAATCCAAGAGATCAGAGTCGATCATGCCCTCGCTCAAAACCAAGAACATAAGCCGAGTAGGTCCCATTTTCAGGTCGACCCACTTCCGGAGCCGGAACCAATCCCTGGAATTGAGCGGCAGGCGTTGCTTTCGTTGCCTCAGGAGGAAGAGCGAGTGAATAGGATTCATATTGAGATCGGGAAAGATCATAGGATTTCATATCCTGAGCGCCTTGGTCGGTCGTCTTCCTCACAGGGGAGTGGAGAGGGCCGATGTGGTGGCGATCAGTTGCCTATGGTGGTGCCTGAAGTTTCGCATTTGGGTTGGGGACACTGGTACACTCTCAGAGAGCTTGAAGCTTCGACTAATGGTTTCGCCCCCGACAATGTAATTGGCGAGGGTGGGTATGGAATTGTTTACCATGGCATATTGGAAGATGGAACTCAGGTTGCTGTGAAGAATTTGCTAAACAACAGGGGCCAAGCCGAGAAGGAGTTTAAAGTTGAAGTTGAAGCAATTGGACGAGTTAGACACAAGAACTTAGTTAGACTGCTTGGATACTGTGCTGAAGGTGCTCATAGGATGCTTGTATATGAGTATATAAATAATGGAAACTTGGAACAATGGCTTCATGGGGATGTGGGATCTTTCAGCCCTCTTACCTGGGAGATTAGAATGAATATCATTCTTGGAACCGCAAAAGGGCTAGCTTACCTTCACGAGGGATTGGAACCAAAGGTTGTTCACCGGGATATCAAATCAAGCAATATCTTACTCGATAAGCAATGGAATTCCAAGGTTTCAGATTTTGGGCTTGCAAAGCTACTATGCTCTGATAATAGTTATATTACAACACGAGTAATGGGGACATTTGGCTATGTAGCACCAGAATATGCAAGTACGGGAATGCTAAATGAAAGAAGTGATGTGTATAGTTTTGGAATACTTGTTATGGAAATAATCTCAGGACGTAATCCCGTTGAGTATAGTCGTCCTCCAGATGAGGTGAACTTGATCGATTGGCTCAAGAGAATGGTCACTAACCAAAATCCAGAGGGCGTATTGGATCCAAAGCTTTCTGAAAAGCCTACTTCAAGAGCATTAAAGCGGGCTCTACTTGTTGCATTACGCTGCGTGGACCCAAATGCTCAGAAACGGCCAAAAATGGGACATATTATTCATATGCTTGAAGCCGAAGATGCTAACTTTAAAGGGGATCGCAAAGCTGGAAAGGACCCAGAGAATTCACATCCAAACAATGTCAAAGATGGTTTAAATGAAAGGCAGGCAACAGAATTAGGTGGCAGCAGTGTCGATGGACTCAGTACTCGACAACGAGATATGTGA 1530 45.23 MSDHKSGSMADQLSKQTSIFGLRLWVVLGVCVGAAFVLFLFLISLWIASKRSRKKISHRPTIPIVSKEIQEIRVDHALAQNQEHKPSRSHFQVDPLPEPEPIPGIERQALLSLPQEEERVNRIHIEIGKDHRISYPERLGRSSSSQGSGEGRCGGDQLPMVVPEVSHLGWGHWYTLRELEASTNGFAPDNVIGEGGYGIVYHGILEDGTQVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYINNGNLEQWLHGDVGSFSPLTWEIRMNIILGTAKGLAYLHEGLEPKVVHRDIKSSNILLDKQWNSKVSDFGLAKLLCSDNSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILVMEIISGRNPVEYSRPPDEVNLIDWLKRMVTNQNPEGVLDPKLSEKPTSRALKRALLVALRCVDPNAQKRPKMGHIIHMLEAEDANFKGDRKAGKDPENSHPNNVKDGLNERQATELGGSSVDGLSTRQRDM 509
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 31407762 31410379 - ClCG01G016900.2 Cla01g01655 265244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g01655 509 MobiDBLite consensus disorder prediction 466 509 - -
Cla01g01655 509 CDD STKc_IRAK 192 458 - -
Cla01g01655 509 ProSitePatterns Protein kinases ATP-binding region signature. 192 214 IPR017441 GO:0005524
Cla01g01655 509 PANTHER RECEPTOR-LIKE KINASE PLANT 1 499 - -
Cla01g01655 509 SMART serkin_6 186 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla01g01655 509 MobiDBLite consensus disorder prediction 480 503 - -
Cla01g01655 509 SUPERFAMILY Protein kinase-like (PK-like) 167 458 IPR011009 -
Cla01g01655 509 PANTHER OS01G0323000 PROTEIN 1 499 - -
Cla01g01655 509 ProSiteProfiles Protein kinase domain profile. 186 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla01g01655 509 Gene3D Phosphorylase Kinase; domain 1 167 261 - -
Cla01g01655 509 ProSitePatterns Serine/Threonine protein kinases active-site signature. 308 320 IPR008271 GO:0004672|GO:0006468
Cla01g01655 509 Gene3D Transferase(Phosphotransferase) domain 1 262 472 - -
Cla01g01655 509 Pfam Protein kinase domain 189 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01655 Cla-Chr1:31407762 Cla05g00149 Cla-Chr5:1397457 0 dispersed
Cla01g01655 Cla-Chr1:31407762 Cla08g01583 Cla-Chr8:28504183 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80273 PF00069 Pkinase 2.80E-47 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g01655 - - csv:101214966 964.526