Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g01661 ATGAACCCCAACCACCCCACATTTCTCTCTTCCCTTCCACTTTTCTGTGCCGTTGTACTGTTTTCTCTCTCCGCTTCTGACGCCTCTGGATTGGCCTTTCAAATTTCGCCGGAAGACTTACTGCTGCCCTCCGACGCCGTTTCTCTTCTTTCCTTCAAGTCCAAAGCCGATTTGAACAACAAGCTTCTTTACACTCTCAATGAGCGCTTTGATTACTGTCAATGGCAGGGCGTGAAGTGTGTACAGGGTCGTGTTGTTCGACTGGTTCTTCAGTCGTTTGGTCTCCGAGGGACATTGGCTCCAAATACAGTGTCTCAGCTCGACCAGCTTCGGATCCTCAGCCTGCATAATAACTCCCTCGAAGGACCCATCCCTGACCTATCTAGACTCTTCAATCTTAAATCTCTGTTCCTTGGCCGAAACTCCTTCGTTGGGTCTTTTCCGCCGTCGATTCTCACTCTTCACCGGCTTCAGACTCTTGATCTTTCCTATAACAACTTTACTGGTCCGCTCCCTACGAGGCTTTCCTCGTTGGACCGACTCATCACTCTTAGGCTTGAATGGAATGGTTTCAATGGAAGTATTCCTCCCTTAAATCAGTCATTCCTTGAGGTCTTCAATATCACGGGGAACAACCTGACCGGCCAAATTCCAGTTACCCCCACTCTGTCACGTTTTAACACGTCGTCGTTTTTCTGGAACCCAAATCTCTGTGGCGAGATCGTTAACAAGGCATGTCATTCACCCACTCCATTCTTTGAAGCTTCCAATGCCACTCCGCCATCTATCCCTTCCGTCCAAAGTGCACAATCACAGGACGTACTTCTCTCTCCCGTTACTCATGTTAAGCACAAGGAAACCGGTATGATTTTGGGGCTTTCAGTCGGCACTGTAGTTTTAATAGTCGGTGTTTTATGTTTCTATGTAGCTACCAGAACCCAGAGAAGTCAGACTGCGTCGAAGCCGGCAATGCCGCAATTCGAAACCGACACTACTTTTTCCACAGCTTCCGCAATTAACAACCGAGTCGAGGGGAAAGGCGAATTTCAAGCCAAAATGAAAGAAAGTGAAGAAATGCCAAAAGCCCAGAAGAGTGGTAATCTTATATTTTGTGAAGGGGAAGCAGAATTATTCAACTTAGAGCAGTTAATGAAGGCTTCGGCCGAATTGCTCGGTAGAGGCACAATGGGAACTACATACAAAGCAGTGCTCTGCAACCAGCTCATCATAACGGTGAAGCGTCTTGATGCTAATAAGACCGCCGCGACGAGCAGCGAAGTGTTCGACCGACATTTGGGAGCACTGGGTGCGCTTCATCACCCTAATTTGGTACCAGTTAGGGCATACTTCCAATCGAAGGGAGAGAGATTAGTGGTGTACGATTACCAACCTAATGGCAGTCTTTACAACCTCATTCACGGTTCAAGATCAGCGAGGGCTAAGCCTTTGCATTGGACGTCATGCTTGAAGATTGCAGAAGATTTAGCTCAGGGCATTGCCTATATACATCAAGCCTCGAATTTAATCCATGGCAACTTAAAGTCTTCTAATGTTCTCCTTGGTGCCGAGTTTGAGGCTTGTCTCACAGACTATGGGCTTTCTGCTCTGGCAGAGGCCTATGAAGATCCAGATTGTTCACGCTACCAAGCCCCTGAAACTCGCAAGTCGAGCCGGAACGCGACCCAGAAGAGCGATGTCTATGCCTTCGGCGTCCTTTTGCTGGAACTTTTGACAGGAAGACATCCTGCACACCATCCATTTCTTGAGCCAACTGACATGCCAGAATGGGTGAGAGTAGTTAGGGAAGATGATGGTGGGGATAGTAACCAACTTGGAATGCTTACTGAGGTGGCTAGCATCTGCAGTACTACATCCCCTGAACAGAGGCCGGCCATGTGGCAAGTTTTGAAAATGATACTGGAGATTAAAGAGAGTGTCATGACAGAGGACAGTGAATCTAGTGGCTTTTAA 1971 47.74 MNPNHPTFLSSLPLFCAVVLFSLSASDASGLAFQISPEDLLLPSDAVSLLSFKSKADLNNKLLYTLNERFDYCQWQGVKCVQGRVVRLVLQSFGLRGTLAPNTVSQLDQLRILSLHNNSLEGPIPDLSRLFNLKSLFLGRNSFVGSFPPSILTLHRLQTLDLSYNNFTGPLPTRLSSLDRLITLRLEWNGFNGSIPPLNQSFLEVFNITGNNLTGQIPVTPTLSRFNTSSFFWNPNLCGEIVNKACHSPTPFFEASNATPPSIPSVQSAQSQDVLLSPVTHVKHKETGMILGLSVGTVVLIVGVLCFYVATRTQRSQTASKPAMPQFETDTTFSTASAINNRVEGKGEFQAKMKESEEMPKAQKSGNLIFCEGEAELFNLEQLMKASAELLGRGTMGTTYKAVLCNQLIITVKRLDANKTAATSSEVFDRHLGALGALHHPNLVPVRAYFQSKGERLVVYDYQPNGSLYNLIHGSRSARAKPLHWTSCLKIAEDLAQGIAYIHQASNLIHGNLKSSNVLLGAEFEACLTDYGLSALAEAYEDPDCSRYQAPETRKSSRNATQKSDVYAFGVLLLELLTGRHPAHHPFLEPTDMPEWVRVVREDDGGDSNQLGMLTEVASICSTTSPEQRPAMWQVLKMILEIKESVMTEDSESSGF 656
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 31496163 31499372 - ClCG01G016960.1 Cla01g01661 265250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g01661 656 ProSiteProfiles Protein kinase domain profile. 385 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla01g01661 656 Gene3D Transferase(Phosphotransferase) domain 1 464 654 - -
Cla01g01661 656 Pfam Protein tyrosine and serine/threonine kinase 389 637 IPR001245 GO:0004672|GO:0006468
Cla01g01661 656 Gene3D Ribonuclease Inhibitor 200 249 IPR032675 -
Cla01g01661 656 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 15 652 - -
Cla01g01661 656 Gene3D Ribonuclease Inhibitor 43 199 IPR032675 -
Cla01g01661 656 SUPERFAMILY L domain-like 47 239 - -
Cla01g01661 656 SUPERFAMILY Protein kinase-like (PK-like) 389 643 IPR011009 -
Cla01g01661 656 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 15 652 - -
Cla01g01661 656 Gene3D Phosphorylase Kinase; domain 1 349 462 - -
Cla01g01661 656 ProSiteProfiles Leucine-rich repeat profile. 109 131 IPR001611 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01661 Cla-Chr1:31496163 Cla07g00678 Cla-Chr7:14544514 1.44E-150 dispersed
Cla01g01661 Cla-Chr1:31496163 Cla11g00245 Cla-Chr11:2868483 3.64E-102 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80274 PF07714 PK_Tyr_Ser-Thr 3.20E-30 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g01661 - - bhj:120074099 1231.47