Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla01g01668 | ATGAGATCGAGCCCAAGTTTTCTATTCGTCGCTATTAACTACGGAAGCTCCAACTTCATTGTGGATATCTCTACTGGTCTTATCTTCATGGATAATAAAGCAACAAACCTGATTCATTTGTATGATAAAATGGATAATGGAACTTCCAATAGTTCAACTCAATCTGCAGTCACCAATTCAGCTCCAATAGTTGATAGCCAAAGTAGTAAAGGAGATAATTTGACATCTATTTTATCTTCGTCTGGAATATCATCTTGGGCTAAGAGTTTCAGAAATCCACAACCACCCGAAGCAGCAGAAAATGACTCCAAAGCAGGAAATTCTGGGATGTCAGCAATTGCTCGTTTCAGTAGTGGTTTTGGACTCCGGATACCTGCGATGTCTCCTGTACAAAGTGATGGTGCTGCAGATACCAAACCAGCAATGCAATCTGGTGTTTTTGAATCACTCACAAAAGGTTTAGTTGACACATCTCAGAATGCAGTAAAGGCTATGCAGGTAAAAGCACGTCATATTGTCTCTCAGAACAAGCGAAGATATCAGGAAGGAGAATTTGATTTGGATATGACATATATCACCGAAAACATAATTGCTATGGGGTTTCCTGCTGGTCACATGAGCTCTGGTTTTTTCGGATTCCTTGAGGGATTTTACAGAAACCATATGGAGGAAGTGATCAAATTTTTTGAAACTCATCATAAGGGAAAATACAAAGTTTACAATCTTTGCTCAGAGCGTTTGTATGATGCCGCATTATTTGAGGGGAAGGTTGCACATTTCCCGTTTGATGATCATAATTGTCCTCCTATCCATCTCACAAGATCATTTTGTCAAAGTGCATATGCATGGTTAAAGGAGGATATTGAGAATGTGGTTGTTGTTCATTGTAAAGCTGGTATGGCAAGAACAGGGCTAATGATTTGCAGCCTCCTTTTATTCCTAAAGTTCTTCCAAACATCAGCAGAGGCGATTGACTATTATAATCAGAAAAGATGCGTGGATGGGAAGGCTTTGGTTCTTCCTAGCCAGATTAGGTATGTCAAGTATTTTGAGCGGATTTTAACACATTTCAACGGAAATACTCCACCAGGACGGAGGTGCATGCTGAGAGGTTTTCGGCTTCACAAGTGCCCGTATTGGGTTAGGCCTTCCGTTACGATATCAAATCACAGTGAGATTTTGTTCTCAACAAGAAAGCATCCAAAGACAAAGGATTTAATGCCAGAAGATTTCTGGATTAGGGCACCAAAGAAAGGATTTGTAGTCTTTGCACTGCCAGGTGAGCCTGGTTTGACAGAGTTGTCTGGGGATTTCAAGATTCATTTTCATGACCGGCATGGAGACTTTTACTGTTGGTTAAATACAACAATGACAGAAAACAAAATATTATTAAGTGACACGGATCTTGATGGTTTCGATAAGAGAAAACTTCCAACCCCTGGATTTCAAGTCGAAGTTGTGATGATAGACTATGATGGTTCTTTGCCAACACGATTGAAAACTGATTCAACTAGCAAAGGATCTGATCGTCGCTCTATTCATGATCGAGCATCAGGTAATGAAGCAGCACAATCCAACACAAACAAAATTTCCGGAGGTGAAGAAAAGGATGACGACGTATTCTCCGATAGTGATGAAGAAAATGGTGACATAAAAACCAGTCTAGCTCACTCAACTTCTGGAACTGGAAATGGAACTTCAAAAGCTGATCATTCATCAACAACAATTGCCTCCGGAAGAATTGTGAGTTTAGCGCATGACACTAGTTGTTTGACCCTCGGAAATGAGAAAAACTCACAACCTAATGCTCCAAAAGAACCTGCCGTAATACAACCATCAGCCATTGAGATCCCAAATTTGGATTTAGTAAGGGCAAGTGATTTCAAGGCAATAGCCGCCGATGCGTCAGTCTTCACATTTGGGGATGAAGAAGACTTTGATAGTGAATGA | 1950 | 40.41 | MRSSPSFLFVAINYGSSNFIVDISTGLIFMDNKATNLIHLYDKMDNGTSNSSTQSAVTNSAPIVDSQSSKGDNLTSILSSSGISSWAKSFRNPQPPEAAENDSKAGNSGMSAIARFSSGFGLRIPAMSPVQSDGAADTKPAMQSGVFESLTKGLVDTSQNAVKAMQVKARHIVSQNKRRYQEGEFDLDMTYITENIIAMGFPAGHMSSGFFGFLEGFYRNHMEEVIKFFETHHKGKYKVYNLCSERLYDAALFEGKVAHFPFDDHNCPPIHLTRSFCQSAYAWLKEDIENVVVVHCKAGMARTGLMICSLLLFLKFFQTSAEAIDYYNQKRCVDGKALVLPSQIRYVKYFERILTHFNGNTPPGRRCMLRGFRLHKCPYWVRPSVTISNHSEILFSTRKHPKTKDLMPEDFWIRAPKKGFVVFALPGEPGLTELSGDFKIHFHDRHGDFYCWLNTTMTENKILLSDTDLDGFDKRKLPTPGFQVEVVMIDYDGSLPTRLKTDSTSKGSDRRSIHDRASGNEAAQSNTNKISGGEEKDDDVFSDSDEENGDIKTSLAHSTSGTGNGTSKADHSSTTIASGRIVSLAHDTSCLTLGNEKNSQPNAPKEPAVIQPSAIEIPNLDLVRASDFKAIAADASVFTFGDEEDFDSE | 649 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 31569197 | 31574639 | + | ClCG01G017030.1 | Cla01g01668 | 265257 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla01g01668 | 649 | ProSiteProfiles | C2 tensin-type domain profile. | 364 | 491 | IPR014020 | - | |
Cla01g01668 | 649 | MobiDBLite | consensus disorder prediction | 503 | 517 | - | - | |
Cla01g01668 | 649 | CDD | PTP_PTEN | 188 | 353 | IPR045101 | GO:0016791 | |
Cla01g01668 | 649 | PANTHER | PHOSPHATASE WITH HOMOLOGY TO TENSIN | 46 | 649 | - | - | |
Cla01g01668 | 649 | MobiDBLite | consensus disorder prediction | 48 | 72 | - | - | |
Cla01g01668 | 649 | Gene3D | Protein tyrosine phosphatase superfamily | 163 | 360 | IPR029021 | - | |
Cla01g01668 | 649 | SMART | PTEN_C2_2 | 362 | 490 | IPR014020 | - | |
Cla01g01668 | 649 | MobiDBLite | consensus disorder prediction | 498 | 574 | - | - | |
Cla01g01668 | 649 | MobiDBLite | consensus disorder prediction | 553 | 574 | - | - | |
Cla01g01668 | 649 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 294 | 304 | IPR016130 | GO:0016311|GO:0016791 | |
Cla01g01668 | 649 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 191 | 358 | IPR029021 | - | |
Cla01g01668 | 649 | MobiDBLite | consensus disorder prediction | 87 | 106 | - | - | |
Cla01g01668 | 649 | PANTHER | PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2B | 46 | 649 | - | - | |
Cla01g01668 | 649 | ProSiteProfiles | Phosphatase tensin-type domain profile. | 178 | 357 | IPR029023 | - | |
Cla01g01668 | 649 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 292 | 331 | IPR000387 | GO:0016311|GO:0016791 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g01668 | Cla-Chr1:31569197 | Cla10g01471 | Cla-Chr10:29933089 | 1.59E-44 | dispersed | |
Cla01g01668 | Cla-Chr1:31569197 | Cla02g00625 | Cla-Chr2:6960842 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla01g01668 | K01110 | - | csv:101213277 | 1100.89 |