Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g01675 ATGGAAAATTACTCTTTGCTTTGCCTTTTTCTCTCTCTTATCTCTCTCATCTTCGCTTTCAATCTCCGCCGTCGCAGAAACTTACCGCCCAGTCCGCTGTCTCTTCCCATCATCGGCCACCTCCATTACCTCAAAATCCCCGTCCACCGAACTTTCCAGAACCTCTCTGCAAAATACGGACCAGTAATCTCTCTTTGGTTCGGATCTCGCCTCGTCGTCGTCGTCTCGTCATTGGACGTGATGGAGGAGTGCTTCACTAAGAACGACATCGTTTTAGCCAACCGTCCTCGGTTGCTAGTCGGCAAATACATCGGCTACAACCACACTACGATGGTAGCGTCACCGTACGGCGAACACTGGAGGAACCTCCGCCGAATTGGAGCTATCGAGATCTTTTCGGCATCTCGCCTCAATAAATTAGCTGGAATCCGAAAGGACGAAGTGGAACGGTTACTGAGGAAGCTATCGAGGAATTCGTTGAATGGATTCTCGAAGGTACATATGCAATCGGCGATTTCGGAACTGACGTTCAACATATCGATGAGAATGGCGGCCGGAAAGAGGTATTTCGGTGAGGAAGTGACGGATGAAGAGGAAGCGAGACAGTTCAGAGATTTGATTAAACAGGTGGTGGCGTTGGGAGGAGTTTCGAATCCAGGAGATTTCATTCCGATGATAAATTGGATTCCGAACGGGTTCAAGAGGAAGGTTTCGGGACTTGCAAAGAGGACGGACGCGTTTTTGCAGGGATTGATCGAGGAACATCGGAGCAAGAAGGAAGAAGGAAGGAACACGATGATCGATCATTTGCTCTCTCTGCAAGAATCAGAGCCGGAGAACTATGGAGATCAAATTATCAAAGGAATTATTCTGCTTAAGATGCCCCAAATATTTTTCATAAATATTGTTATTATTAAGAGACATGTTTTGTTACTAGCAGGAACGGACACATCAGCTGTGACAATTGAATGGGCTCTAGCTCACTTACTCAACAACCCAGAGGTACTCAAAAAGGCTAGAGAAGAGCTAGACGCTCAAATCGGAGAAGATCGACTAGTGGAAGAATCAGACGTCCCCAAGTTACCATATCTTCAAGGAATCATCTCTGAGACTCTTCGGTTGAACCCAGCTGCTCCGATGCTAGTGCCACATCTCACCTCCGACGATTGCACAATCAGCGGCTACGACATACCACGTGACACAATTGTATTGGTTAATGCATGGGCCATCCACAGAGATCCTAATCTATGGGAAGAACCCACACTATTCAAACCAGAAAGACACCAAAAGTCATCAGAACTAGGTGAACATCAGGTCCACAAGTTGGTTCCATTTGGAGTTGGACGTCGAGCTTGCCCTGGGTCCGGCATGGCTCAACGAGTGGTGGGGTTGGCTCTAGCGGCCCTGATTCAGTGCTACGAATGGCAGAGGATTGGCGAAGAGAAAATAGACATGACGGAGGGACGAGGCGTCACTATGCCCAAGGCAGTGCCATTGGAAGTCATGTGCAAACCTCGTCGTATCATCCACAACCTTTTTAACTGA 1545 47.83 MENYSLLCLFLSLISLIFAFNLRRRRNLPPSPLSLPIIGHLHYLKIPVHRTFQNLSAKYGPVISLWFGSRLVVVVSSLDVMEECFTKNDIVLANRPRLLVGKYIGYNHTTMVASPYGEHWRNLRRIGAIEIFSASRLNKLAGIRKDEVERLLRKLSRNSLNGFSKVHMQSAISELTFNISMRMAAGKRYFGEEVTDEEEARQFRDLIKQVVALGGVSNPGDFIPMINWIPNGFKRKVSGLAKRTDAFLQGLIEEHRSKKEEGRNTMIDHLLSLQESEPENYGDQIIKGIILLKMPQIFFINIVIIKRHVLLLAGTDTSAVTIEWALAHLLNNPEVLKKAREELDAQIGEDRLVEESDVPKLPYLQGIISETLRLNPAAPMLVPHLTSDDCTISGYDIPRDTIVLVNAWAIHRDPNLWEEPTLFKPERHQKSSELGEHQVHKLVPFGVGRRACPGSGMAQRVVGLALAALIQCYEWQRIGEEKIDMTEGRGVTMPKAVPLEVMCKPRRIIHNLFN 514
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 31678165 31681914 - ClCG01G017130.2 Cla01g01675 265264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g01675 514 Gene3D Cytochrome P450 19 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01675 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Cla01g01675 514 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01675 514 PRINTS E-class P450 group I signature 80 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01675 514 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01675 514 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01675 514 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01675 514 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01675 514 PRINTS E-class P450 group I signature 175 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01675 514 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01675 514 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01675 514 SUPERFAMILY Cytochrome P450 29 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01675 514 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01675 514 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01675 514 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01675 514 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01675 514 Pfam Cytochrome P450 29 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01675 514 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 4 511 - -
Cla01g01675 514 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 511 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01675 Cla-Chr1:31678165 Cla02g00805 Cla-Chr2:10596922 0 dispersed
Cla02g00800 Cla-Chr2:10442888 Cla01g01675 Cla-Chr1:31678165 0 dispersed
Cla01g01675 Cla-Chr1:31678165 Cla01g01676 Cla-Chr1:31686953 0 tandem
Cla01g01675 Cla-Chr1:31678165 Cla05g02084 Cla-Chr5:32494952 1.20E-166 wgd
Cla01g01675 Cla-Chr1:31678165 Cla08g01605 Cla-Chr8:28690494 2.63E-158 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g01675 K13260 - csv:101211829 803.512