Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g01692 ATGGCGAATCCGGTTTGGATTTTTCTTCTTTTCTGTTTCTTCTCTGTGCCGTCCATGGCTGCCACACAGAAGAAGAAGACTTACATCGTGCATATGGCTAAATACCAAATGCCCGAGAGTTTTGAACACCACTTGCACTGGTACGACTCCTCACTCAGATCCGTGTCCGATACTGCTGAGATGATCTATGCTTACAACAACGTCGTTCATGGGTTTTCAACCAGATTGACGGCGGATGAAGCTCAGCGGCTCGAGGCCCAACCTGGGATTCTGGCTGTGGTGCCCGAGATGAGATATGAACTTCATACAACTCGTACTCCGCAGTTTCTTGGACTCGACAAGAATGCAAATCTTTACCCTGAATCCAATTCTGTGTCGGAGGTCATCATCGGAGTTTTGGATACTGGGATTTGGCCGGAGAGTAAAAGCTTCGATGATACTGGGCTTGGACCGATACCGAGTAGCTGGAAGGGTGAGTGTGAATCAGGTACTAATTTCAGTGCGTCGAACTGCAACAGGAAGCTGATTGGAGCTAGATTTTTCTCCAAGGGCTACGAGGCGACTCTCGGTCCGATCGATGAATCGAAAGAATCGAGATCTCCGAGAGATGACGATGGCCATGGAACCCACACCGCTACAACTGCCGCCGGTTCTGTAGTTGAAAACGCGAGCCTATTTGGGTATGCCTCCGGCACCGCCCGTGGGATGGCCGCGCGTGCGAGGGTCGCCGCCTACAAGGTTTGCTGGACCGGTGGATGTTTCAGCTCCGATATCGTAGCCGCCATTGAAAAGGCTGTGGTGGACAATGTTAATGTCCTTTCCTTGTCGCTTGGCGGTGGAGTATCCGATTATTACAAGGACAGTGTTGCCACCGGCGCATTCGCTGCCATGGAGAAAGGCATCCTCATTTCTTGCTCTGCCGGAAATGCCGGCCCCAGTCCTTACAGCTTGTCAAATACGTCTCCATGGATTACAACCGTCGGTGCCGGAACATTAGATCGCGATTTTCCGGCGTACGTCAGTCTTGGTGACGCCAAGAACTTCTCCGGCGTTTCGCTCTATCAAGGCAAGGCATTGCCTGGAACGTTGTTGCCTTTTATTTACGCTGCTAACGCGAGTAACTCTGGTAATGGCAATTTGTGTATGACCGGTACTTTGATCCCTGAAAAAGTCGCCGGAAAGATCGTTTTCTGCGACCGAGGTGTAAACCCTAGGGTTCAGAAAGGTGCGGTCGTCAAGGCTGCAGGTGGAATCGGAATGGTGCTGGCCAATACTGCCGCAAATGGAGAAGAGCTGGTGGCTGACTCTCATCTTCTGCCGGCCACGGCTGTCGGTCAGAAATCCGGTGACATTATACGGAAGTATCTCATTTCGGAGCCCAATCCGACGGTGACGATCTTATTCGAAGGGACTAAATTGGGGATCGAACCATCGCCGGTGGTGGCGGCGTTTAGCTCCCGAGGACCAAATTCGATCACTCCTCAGTTGCTGAAACCCGACATAATAGCCCCTGGCGTCAACATCTTAGCTGGATGGTCAAAATCAGTGGGACCAAGTGGTTTAGCCATTGATGACAGACGAGTGGATTTCAACATTATCTCTGGAACCTCCATGTCCTGCCCCCATGTGAGCGGTCTCGCCGCTCTGATCAAGGGCGCTCATCCCGATTGGAGTCCGGCGGCGATTCGATCGGCGTTGATGACAACAGCCTACACAGCCTACAAAAACGGCCAAAAGATCCAAGATATAGCCACCGGAAAACCATCCACCGCATTCGATCACGGAGCCGGACACGTCGATCCCGTATCAGCTCTCAATCCGGGTCTTGTTTACGATCTAACGGTGGACGATTACCTAAACTTCCTATGCGCACTCAACTATACTCCGTCGCAGATCAACTCATTGGCAAGGAGAGATTTCACTTGCGACCCCAAGAAGAAGTACAGTGTTAACGATCTCAACTACCCTTCTTTCGCCGTCGTTTTCGACGGCGTATTGGGCGGTGGAGGCAGTGGTTCCAGCGTAGTCAAGCACACCAGAACTCTTACAAACGTCGGCTCCCCAGGAACCTACAAAGTCTCAATCTCGTCGGAGACCAAACTGGTGAAAATCTCTGTCGAGCCGGAATCTTTAAGCTTCACGGGAGCCAATGAGAAGAAGTCATATACAGTCACATTCACCACCGCGACTGGTTCGGCGGCGCCACCCAACGCGGAAGGGTTCGGTCGAATTGAGTGGTCGGACGGGAAGCACGTGGTGGGTAGTCCGATTGCGTTTAGCTGGACATAG 2289 52.03 MANPVWIFLLFCFFSVPSMAATQKKKTYIVHMAKYQMPESFEHHLHWYDSSLRSVSDTAEMIYAYNNVVHGFSTRLTADEAQRLEAQPGILAVVPEMRYELHTTRTPQFLGLDKNANLYPESNSVSEVIIGVLDTGIWPESKSFDDTGLGPIPSSWKGECESGTNFSASNCNRKLIGARFFSKGYEATLGPIDESKESRSPRDDDGHGTHTATTAAGSVVENASLFGYASGTARGMAARARVAAYKVCWTGGCFSSDIVAAIEKAVVDNVNVLSLSLGGGVSDYYKDSVATGAFAAMEKGILISCSAGNAGPSPYSLSNTSPWITTVGAGTLDRDFPAYVSLGDAKNFSGVSLYQGKALPGTLLPFIYAANASNSGNGNLCMTGTLIPEKVAGKIVFCDRGVNPRVQKGAVVKAAGGIGMVLANTAANGEELVADSHLLPATAVGQKSGDIIRKYLISEPNPTVTILFEGTKLGIEPSPVVAAFSSRGPNSITPQLLKPDIIAPGVNILAGWSKSVGPSGLAIDDRRVDFNIISGTSMSCPHVSGLAALIKGAHPDWSPAAIRSALMTTAYTAYKNGQKIQDIATGKPSTAFDHGAGHVDPVSALNPGLVYDLTVDDYLNFLCALNYTPSQINSLARRDFTCDPKKKYSVNDLNYPSFAVVFDGVLGGGGSGSSVVKHTRTLTNVGSPGTYKVSISSETKLVKISVEPESLSFTGANEKKSYTVTFTTATGSAAPPNAEGFGRIEWSDGKHVVGSPIAFSWT 762
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 31854378 31856666 - ClCG01G017310.2 Cla01g01692 265281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g01692 762 CDD PA_subtilisin_like 339 466 - -
Cla01g01692 762 Gene3D Peptidase S8/S53 domain 128 618 IPR036852 GO:0004252|GO:0006508
Cla01g01692 762 Gene3D - 333 474 - -
Cla01g01692 762 PRINTS Subtilisin serine protease family (S8) signature 125 144 IPR015500 -
Cla01g01692 762 PRINTS Subtilisin serine protease family (S8) signature 203 216 IPR015500 -
Cla01g01692 762 PRINTS Subtilisin serine protease family (S8) signature 534 550 IPR015500 -
Cla01g01692 762 Pfam Subtilase family 126 577 IPR000209 GO:0006508|GO:0008236
Cla01g01692 762 ProSiteProfiles Serine proteases, subtilase domain profile. 98 605 - -
Cla01g01692 762 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 15 102 IPR037045 -
Cla01g01692 762 Gene3D - 622 761 - -
Cla01g01692 762 Pfam PA domain 381 451 IPR003137 -
Cla01g01692 762 ProSitePatterns Serine proteases, subtilase family, serine active site. 535 545 IPR023828 -
Cla01g01692 762 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 17 760 - -
Cla01g01692 762 CDD Peptidases_S8_3 99 571 IPR034197 -
Cla01g01692 762 Pfam Fibronectin type-III domain 652 758 IPR041469 -
Cla01g01692 762 MobiDBLite consensus disorder prediction 191 214 - -
Cla01g01692 762 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 17 760 IPR045051 -
Cla01g01692 762 MobiDBLite consensus disorder prediction 191 209 - -
Cla01g01692 762 SUPERFAMILY Subtilisin-like 101 609 IPR036852 GO:0004252|GO:0006508
Cla01g01692 762 Pfam Peptidase inhibitor I9 27 102 IPR010259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01692 Cla-Chr1:31854378 Cla03g01443 Cla-Chr3:29980684 0 dispersed
Cla02g01160 Cla-Chr2:24979009 Cla01g01692 Cla-Chr1:31854378 0 transposed
Cla05g00825 Cla-Chr5:8071108 Cla01g01692 Cla-Chr1:31854378 0 transposed
Cla09g00121 Cla-Chr9:1241448 Cla01g01692 Cla-Chr1:31854378 0 transposed
Cla01g01692 Cla-Chr1:31854378 Cla08g01611 Cla-Chr8:28719089 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g01692 - - csv:101209691 1387.47