Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g01702 ATGATGCAATTCAGCGAGACACCCCCACGGTTGCACCAAACGACCACTACTACAACAAGGATTATTCCTCCTTCATTTCCAGAGATGTCGATGAATAATAAAAACCAAATTACAACAACGGGGCAGTTTCGAAGTAGGCGGCCATGGCCTGGTTTATTTCCTTGCTCATCCAAAGCTTTAGGGACTTGCTTGGGAGATGCCAATTGTATGGAACAATTGTTAGTTCATTGTGCCAACGCCATTGAAACCAACGACGCTACTCTCGCCCAACAAATCCTTTGGGTTCTTAACAACATTGCCCCTCCTGATGGCGATTCCAACCAACGCCTCACTTCCGCTTTCCTACGCGCTCTCGTCACACGCGCCACCAACACCGGTAACTGCAAGATCCTAGCCGCTATCACCACCGCATTCTCCTCCTCACTCACCACACACACCTTCTCCCTTATGGACCTCGCCGCCTTCGTCGACTTAACCCCCTGGCACCGCTTCGGCTTCACCGCCGCCAATGTCGCCATTCTCGACGCCATCGAGGGTTACTCCGTCGTACATGTCGTGGATTTCAGCTTGATGCATTGCATGCAAATCCCTACTTTAATCGACGCCATTGCTACACGATTTGAGGTTCCTCCGTTGTTGAAACTCACGACTGTAGCTGTTGTTGCCGTTAAAGACGCATCGCCTATGCTGGAGCTTTCGTACGACGAATTAGGTGCGAAATTAGTGAACTTCGCCAGGTCTAAAAACGTGACTATGGAATTTAGAGTGGTCCCGTCTTGTCATACAGACGGTTTCGCCAGTTTAATTGAACAAATCCGAATGCAAAACTTAATTTACGGACCTGAAAATAACGAAGCACTCGTTTTTAATTGTCACATGATGCTTCATTACATCCCTGAAGAAACATTAAACCCAAACCCATCTCCCAATTTCGACATGTCGTCCACTTCAATTCGTTCCATGTTTCTCAAGGCAATCCGTAGTTTAGACCCAACGATTGTGGTTTTAGTAGACGAAGATGCGGATTTCACTTCAAGCAAATTGGTTACACGATTGAGATCGGCGTTTAATTACCTATGGATTCCTTACGACTCCATGGATTCGTTTCTTCCGAGAAGCAGCAAGCAGAGGGAATGGTATGAAGCCGACATTTGTTGGAAGATTGAGAATGTAATTGCACAGGAAGGGATTCAACGAGTTCAAAGATTGGAACCGAAGGGACGGTGGGTTCAACGGATGGTGAACGCCAAATTCCGAGGGGTTCCGTTTGGAGAGGACGCCGTTACGGAGGTGAAGGGGATGCTTGACGAGCATGCAGGGGGATGGGGGTTGAAGAAAGAAGAGGACCACCTGCTGCTCACGTGGAAAGGGCACGACGTCGTTTTCGCTACTGCTTGGGTACCTTGCTAA 1410 48.23 MMQFSETPPRLHQTTTTTTRIIPPSFPEMSMNNKNQITTTGQFRSRRPWPGLFPCSSKALGTCLGDANCMEQLLVHCANAIETNDATLAQQILWVLNNIAPPDGDSNQRLTSAFLRALVTRATNTGNCKILAAITTAFSSSLTTHTFSLMDLAAFVDLTPWHRFGFTAANVAILDAIEGYSVVHVVDFSLMHCMQIPTLIDAIATRFEVPPLLKLTTVAVVAVKDASPMLELSYDELGAKLVNFARSKNVTMEFRVVPSCHTDGFASLIEQIRMQNLIYGPENNEALVFNCHMMLHYIPEETLNPNPSPNFDMSSTSIRSMFLKAIRSLDPTIVVLVDEDADFTSSKLVTRLRSAFNYLWIPYDSMDSFLPRSSKQREWYEADICWKIENVIAQEGIQRVQRLEPKGRWVQRMVNAKFRGVPFGEDAVTEVKGMLDEHAGGWGLKKEEDHLLLTWKGHDVVFATAWVPC 469
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 31963163 31964572 - ClCG01G017410.1 Cla01g01702 265291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g01702 469 Pfam GRAS domain family 70 466 IPR005202 -
Cla01g01702 469 ProSiteProfiles GRAS family profile. 61 467 IPR005202 -
Cla01g01702 469 PANTHER SCARECROW-LIKE PROTEIN 32 36 467 - -
Cla01g01702 469 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 36 467 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01702 Cla-Chr1:31963163 Cla02g00157 Cla-Chr2:1669117 2.06E-122 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
60450 PF03514 GRAS 4.40E-91 CL0063 Cla TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g01702 - - csv:101213756 843.958