Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g01760 ATGTCAACATTTTCATCAATATTTTCACATTTATATGAGTTTGACATAGACATGAGGTTTCCCCTCCTTCCTCTGAAAATCAGAATTCAAAAAGAAGAAGAAGAAGAAGAAGAAGTAATGTGGTTTCTTCTTGTTTTTGTGCTTCTTCAACTTCACTTTTCCCCTTCCTTCTCTGCCTTCCTACCCGAATCCCAAGCCCTACTCTCTCTCAAATCCTCCATTTCTTACGACCCTCGTTCTTCTCTCTCCTCCTGGAACGCCGTCGCCGCCCACTGTACCTGGTTCGGCGTCACATGCGACGCCCGCCGCCACGTCATTGCCCTCCACCTCTCTTCCCTTGACCTCGCCGGCACCATTTCCCCTGACCTTGCGTCTCTTCGCTTTCTCACTAATGTTTCCTTCGGCCTCAACAAATTTTCCGGCGGAATCCCACCGGAGATTGCCTCCATTTCTTCTCTCCAGTATCTTAATCTCTCTAGTAACGTCCTCAATGGGTCGATTCCTCGCGAGTTTTCGCAGCTCAAAAACTTACAGGTTCTTGATGTTTATAACAATAACCTGACCGGTGATTTTCCCAGAGTGGTCACTGAAATGACCAACCTCCGCCATTTGCACCTTGGGGGAAATTTCTTCACCGGTCGGATTCCTCCGGAGGTCGGACGGTTGCAGTTCTTGGAGTTTTTGGCGATTCACGGCAATGACCTTGAAGGTCCAATACCGCCGGCGATCGGAAACTTGACGAAGCTTCGGGAACTTTACATTGGTTACTACAACATCTTCGTCGGTGGAATACCGTCGACGATAGGGAATTTGTCGGAGTTAGTTCGGTTGGATGCCGCGAGCTGTGGGTTGACCGGAAAGTTTCCGCCGGAGCTGGGAAAGTTGCAGAAACTCACTGAACTGTACCTTCAACAAAATGCTCTGTCTGGACCTTTGCTGGAGCTAGGAGGATTGAAGAGCATAGAAGAGTTGGATATATCATGCAATATGCTTGTTGGTGAAATACCCATCTCTTTTGCAGAGTTCAAGAACTTGAGGCTGTTGCAACTTTTCGACAACAAGCTCTCCGGAGAGATTCCGGGATTCATGGGCGACCTCCCAAAGCTGGAGATATTGCAATTATGGAACAACAATTTCACAGGTTCGATCCCTCGAAATTTGGGGAAGAACGGAATGCTTCGGACTCTCGACCTTGCTTTCAACCACTTGACAGGTACGATTCCTCCTGAAATCTGCCATGGGAATAAGCTTGAAGTTTTGATCGCCATGGGCAATTCCTTGTCTGGTTCCATCCCAGAATCATTGGGGAATTGTATTTCACTTAAGCGTATACTTCTGTGGGGAAACGCTCTTAATGGATCAATTCCAAAGAGGCTTTTGAGTTTGCCAAATCTCACTCAAGTTGATTTGCAAGACAATTTTCTCTCCGGAGAATTTCCCATTACCAATTCAGTCTCGGTCAACCTTCTTCAGATAAGTTTATCTAATAATATGCTCTCTGGATCCTTGCCACCCACCATCGGCAGCCTTGTGGCCGTCCAGAAGCTTCTTCTTGACCGGAATAAGTTTTCTGGTCAGATTCCTTCAAATATTGGGAGATTACAGCAACTATCTCGGATAAATTTCAGCCAGAATAAGTTCTCTGGTACAATTGTGCCAGAGATAAGTGAGTGTAAACACTTAATATTTCTTGATCTTAGTGGAAATGAGCTTTCTGGTGAAATCCCCGACCATATTACCAACATGAAGTTATTGAATTATATGAATCTCTCAAGAAACCATTTAGTTGGGCCCATTCCTGCTTCAATAGTTAACATGCAGAGCTTAACCTCTGTGGACTTTTCATATAACAATCTCTCTGGTTTGGTTCTGGGAACTGGACAATTTGGTTACTTCAATTACACATCATTTTTAGGCAATCCTTATCTCTGTGGTGCATATTTGGGGCCTTGCAAAGATGGGGTTCTTGCTAGCAATCACCAAGAACATATGAAAGGCTCTCTCTCAACTCCTCTCAGGCTCCTGCTAGTTTTTGGTTTTTTTTTTGGTTTAGTTGCACTCACAGTTGCATTGATCTCCAAAGTTCGGTGGTTTAAGAGAGCAAGGGAGTCTAGAGGATGGAGATTAACAGCCTTCCAACGGCTGGGTTTCTCGGTTGATGAGATCTTGGATTGCCTTAAGAAGGAAAATCTTATTGCAAAAGGAGGTTATGGCACAGTATATACAGGAGTGATGCCTAGTGGTGATCAGATCACTCTGAAAAGGCTTCCAAAGATGAGCAATGGGTGTTCTCGTGACCACGGATTCAATGCCGAGATTCAAGCTCTTGGGAGGATTCGACACCGACACATTGTTAGATTATTGGGCCTCTGTTCAAACCATGAAACTAATCTTTTGGTATTTGAGTACATGCCTAATGGGAGTCTCTATGAGGTTCTCCATGGCAAGAAAGGAGGTCACTTGCTTTGGGATACGAGGTACAAGATAGCCATTGGAACTGCGAATGGACTCTGCTATCTTCACCACCATTGCTCGCCGCCCATTGTTCATCGAAATGTGAAATCAAACAACATTATGCTAGACACCAACTTTGAAGCTCAAATTGCCAATTCCGGGCTTGCAAAGTTCTTAGAAGATTCAAGGACATCGGATAAGTCAGCTACCGAGCCAGAGCATGCCGACACACAGAATGCCGATGAGAAGTGGGATGTATATAGCTTCGGTATCATCCTATTGGAACTCGTTAGCGGTAGGAATCCAGTCGGAGAACTAAGCGACAGTGTCGACATAGTTCAATGGGTTAGAAACATGTCAGTTTCAGAAAAGGAAGAAATACATAAAATCGTCGATCAAAGACTCTCCTCCGTCCCCCTTGACGAAGTGATGCACGTGCTCAATGTTGCCATGCTGTGCACTGAAGAAGAGGCTGCAAAGCGTCCCACGATGCGGGAAAGTCGCCTGTTAGAAGAAAAAGGAAGCATTATTAGTTACAGACTGCCTTGTGTCTTGAAGCACGTGGTGATGATTTGTGTTAGGAGTCAGGAGTATGTACTTGCAGGGTGTTTTGGTTGGGATGGGATGGGCTATGATCTGCTACTGTGA 3102 45.16 MSTFSSIFSHLYEFDIDMRFPLLPLKIRIQKEEEEEEEVMWFLLVFVLLQLHFSPSFSAFLPESQALLSLKSSISYDPRSSLSSWNAVAAHCTWFGVTCDARRHVIALHLSSLDLAGTISPDLASLRFLTNVSFGLNKFSGGIPPEIASISSLQYLNLSSNVLNGSIPREFSQLKNLQVLDVYNNNLTGDFPRVVTEMTNLRHLHLGGNFFTGRIPPEVGRLQFLEFLAIHGNDLEGPIPPAIGNLTKLRELYIGYYNIFVGGIPSTIGNLSELVRLDAASCGLTGKFPPELGKLQKLTELYLQQNALSGPLLELGGLKSIEELDISCNMLVGEIPISFAEFKNLRLLQLFDNKLSGEIPGFMGDLPKLEILQLWNNNFTGSIPRNLGKNGMLRTLDLAFNHLTGTIPPEICHGNKLEVLIAMGNSLSGSIPESLGNCISLKRILLWGNALNGSIPKRLLSLPNLTQVDLQDNFLSGEFPITNSVSVNLLQISLSNNMLSGSLPPTIGSLVAVQKLLLDRNKFSGQIPSNIGRLQQLSRINFSQNKFSGTIVPEISECKHLIFLDLSGNELSGEIPDHITNMKLLNYMNLSRNHLVGPIPASIVNMQSLTSVDFSYNNLSGLVLGTGQFGYFNYTSFLGNPYLCGAYLGPCKDGVLASNHQEHMKGSLSTPLRLLLVFGFFFGLVALTVALISKVRWFKRARESRGWRLTAFQRLGFSVDEILDCLKKENLIAKGGYGTVYTGVMPSGDQITLKRLPKMSNGCSRDHGFNAEIQALGRIRHRHIVRLLGLCSNHETNLLVFEYMPNGSLYEVLHGKKGGHLLWDTRYKIAIGTANGLCYLHHHCSPPIVHRNVKSNNIMLDTNFEAQIANSGLAKFLEDSRTSDKSATEPEHADTQNADEKWDVYSFGIILLELVSGRNPVGELSDSVDIVQWVRNMSVSEKEEIHKIVDQRLSSVPLDEVMHVLNVAMLCTEEEAAKRPTMRESRLLEEKGSIISYRLPCVLKHVVMICVRSQEYVLAGCFGWDGMGYDLLL 1033
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 32501800 32507872 - ClCG01G018010.1 Cla01g01760 265349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g01760 1033 Gene3D Ribonuclease Inhibitor 62 214 IPR032675 -
Cla01g01760 1033 Gene3D Ribonuclease Inhibitor 215 315 IPR032675 -
Cla01g01760 1033 Gene3D Ribonuclease Inhibitor 317 388 IPR032675 -
Cla01g01760 1033 Gene3D Phosphorylase Kinase; domain 1 697 803 - -
Cla01g01760 1033 Pfam Protein tyrosine and serine/threonine kinase 727 984 IPR001245 GO:0004672|GO:0006468
Cla01g01760 1033 SUPERFAMILY Protein kinase-like (PK-like) 720 984 IPR011009 -
Cla01g01760 1033 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 42 993 - -
Cla01g01760 1033 SUPERFAMILY RNI-like 108 452 - -
Cla01g01760 1033 SMART LRR_sd22_2 246 273 - -
Cla01g01760 1033 SMART LRR_sd22_2 174 203 - -
Cla01g01760 1033 SMART LRR_sd22_2 295 326 - -
Cla01g01760 1033 Pfam Leucine rich repeat N-terminal domain 63 100 IPR013210 -
Cla01g01760 1033 Gene3D Transferase(Phosphotransferase) domain 1 804 994 - -
Cla01g01760 1033 SUPERFAMILY L domain-like 390 650 - -
Cla01g01760 1033 ProSiteProfiles Protein kinase domain profile. 726 1008 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla01g01760 1033 Gene3D Ribonuclease Inhibitor 389 654 IPR032675 -
Cla01g01760 1033 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 42 993 - -
Cla01g01760 1033 Pfam Leucine rich repeat 152 209 IPR001611 GO:0005515
Cla01g01760 1033 SMART LRR_typ_2 391 414 IPR003591 -
Cla01g01760 1033 SMART LRR_typ_2 295 318 IPR003591 -
Cla01g01760 1033 SMART LRR_typ_2 366 390 IPR003591 -
Cla01g01760 1033 SMART LRR_typ_2 198 222 IPR003591 -
Cla01g01760 1033 SMART LRR_typ_2 606 629 IPR003591 -
Cla01g01760 1033 SMART LRR_typ_2 150 174 IPR003591 -
Cla01g01760 1033 SMART LRR_typ_2 510 534 IPR003591 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01760 Cla-Chr1:32501800 Cla10g00776 Cla-Chr10:14753611 0 dispersed
Cla10g01257 Cla-Chr10:27428139 Cla01g01760 Cla-Chr1:32501800 3.84E-31 dispersed
Cla01g01760 Cla-Chr1:32501800 Cla01g01761 Cla-Chr1:32517304 0 tandem
Cla10g00313 Cla-Chr10:4135203 Cla01g01760 Cla-Chr1:32501800 6.75E-06 transposed
Cla11g00330 Cla-Chr11:3754092 Cla01g01760 Cla-Chr1:32501800 1.56E-153 transposed
Cla01g01760 Cla-Chr1:32501800 Cla11g01478 Cla-Chr11:28401275 4.94E-148 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80278 PF07714 PK_Tyr_Ser-Thr 9.30E-36 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g01760 - - csv:101204543 1706.42