Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g01782 ATGGGTCGAGGGAAGATTGTGATAAGAAGGATTGATAATTCAGCAAGTAGACAAGTGACTTTCTCCAAGAGAAGAAAGGGACTTATTAAAAAGGCTAAAGAACTCTCTATTCTCTGTGATGCTGAAGTTGGTCTCATTATTTTTTCCAGCTCTGGCAAACACTATGAATTTGCAAGCACTAGCATACAGTCAGTAATTGAGAAATATAACAGAAGGAAGGAGGAAGATGAACTGCTGTTGAATCCAATTTCAGATGTCAAGTTATGGCAGAAGGAAGTAACAACTCTAAGGCAGCAACTACATAACTTGCAGGAGAACAATAGGAAATTAATGGGGGAGCAGCTCTATGGTTTATCAATCAAAGACCTAAACAATCTTGAGAGCCAATTGGAGTTCAGCTTACAAAGCATCCGAATTAAAAAGGAACAAATATTAAATGATGAAATAAAAGAATTGAACCGAAAGGGAATTCTGATGCATCAAGAAAATATAGAGTTGAGCAATAAAGTAAACCTTTATTGTCAAGAAAACATGGAATTACACAGAAAGGTTTACGGGCATGATTCGAGATCAGAGATGAACTTGGCCACCGGAAATGCCTTGATTCCATATGGTATCATCACCGCCGCCGCCGCCGCCGCCGCCGCCGTCCCTATTGCAAGCGACGCCCTGCGTGTACCAATCCATCTTCAGCTCAGCCCGCCGGAGCAACAAGCTTAA 720 41.39 MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVGLIIFSSSGKHYEFASTSIQSVIEKYNRRKEEDELLLNPISDVKLWQKEVTTLRQQLHNLQENNRKLMGEQLYGLSIKDLNNLESQLEFSLQSIRIKKEQILNDEIKELNRKGILMHQENIELSNKVNLYCQENMELHRKVYGHDSRSEMNLATGNALIPYGIITAAAAAAAAVPIASDALRVPIHLQLSPPEQQA 239
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 32765022 32769184 - ClCG01G018230.2 Cla01g01782 265371

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g01782 239 SUPERFAMILY SRF-like 2 77 IPR036879 GO:0003677|GO:0046983
Cla01g01782 239 ProSiteProfiles K-box domain profile. 86 176 IPR002487 GO:0003700|GO:0005634|GO:0006355
Cla01g01782 239 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Cla01g01782 239 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 238 - -
Cla01g01782 239 Gene3D - 13 83 IPR036879 GO:0003677|GO:0046983
Cla01g01782 239 Coils Coil 123 143 - -
Cla01g01782 239 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Cla01g01782 239 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Cla01g01782 239 Coils Coil 86 113 - -
Cla01g01782 239 Pfam K-box region 85 170 IPR002487 GO:0003700|GO:0005634|GO:0006355
Cla01g01782 239 PANTHER MADS-BOX TRANSCRIPTION FACTOR 23 ISOFORM X1 1 238 - -
Cla01g01782 239 CDD MADS_MEF2_like 2 77 IPR033896 GO:0000977|GO:0045944
Cla01g01782 239 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Cla01g01782 239 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Cla01g01782 239 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g01782 K09264 K09264; MADS-box transcription factor, plant - csv:101206453 426.017
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01782 Cla-Chr1:32765022 Cla11g01441 Cla-Chr11:28033207 1.22E-42 dispersed
Cla01g01782 Cla-Chr1:32765022 Cla10g00943 Cla-Chr10:22268981 4.06E-87 wgd
Cla01g01782 Cla-Chr1:32765022 Cla11g01440 Cla-Chr11:28025592 4.39E-30 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cla03g00684 CCT 12 234 MADS-box Gene Family AT3G58780 65.5 1.3e-75 280.0
Cla02g01796 . 1 267 MADS-box Gene Family AT3G58780 57.9 4.6e-73 271.6
Cla01g02351 CCT 7 283 MADS-box Gene Family AT3G58780 52.1 1.9e-66 249.6
Cla04g01139 . 1 245 MADS-box Gene Family AT1G26310 56.1 2.0e-68 256.1
Cla07g01524 . 1 253 MADS-box Gene Family AT1G26310 51.7 1.1e-58 223.8
Cla08g01054 . 1 159 MADS-box Gene Family AT1G26310 65.9 1.3e-56 216.9
Cla08g01053 . 1 180 MADS-box Gene Family AT1G26310 54.6 1.2e-44 177.2
Cla07g01523 . 1 173 MADS-box Gene Family AT1G26310 54.5 4.2e-42 168.7
Cla06g00019 . 1 159 MADS-box Gene Family AT1G26310 58.8 6.1e-41 164.9
Cla03g00684 CCT 20 197 MADS-box Gene Family AT4G09960 74.7 5.8e-67 251.1
Cla08g00042 . 1 236 MADS-box Gene Family AT4G09960 58.9 2.1e-64 242.7
Cla01g02351 CCT 9 238 MADS-box Gene Family AT4G09960 57.0 4.5e-59 224.9
Cla02g01796 . 1 216 MADS-box Gene Family AT4G09960 58.8 5.8e-59 224.6
Cla08g00049 . 1 189 MADS-box Gene Family AT1G71692 52.8 8.5e-49 190.7
Cla06g00019 . 1 242 MADS-box Gene Family AT3G61120 56.3 4.6e-62 235.0
Cla05g00830 . 19 189 MADS-box Gene Family AT3G61120 50.3 6.8e-42 167.9
Cla07g01523 . 1 173 MADS-box Gene Family AT3G61120 53.8 1.2e-41 167.2
Cla06g00195 . 1 170 MADS-box Gene Family AT3G61120 55.8 2.0e-41 166.4
Cla04g01139 . 1 168 MADS-box Gene Family AT3G61120 51.5 3.9e-37 152.1
Cla08g01053 . 1 173 MADS-box Gene Family AT3G61120 50.9 3.9e-37 152.1
Cla01g00316 . 9 216 MADS-box Gene Family AT4G11880 57.3 1.9e-54 209.5
Cla05g00211 . 1 214 MADS-box Gene Family AT4G11880 53.4 4.7e-50 194.9
Cla06g00020 . 1 218 MADS-box Gene Family AT4G11880 53.4 5.2e-49 191.4
Cla01g00524 CCT,ECH 1 210 MADS-box Gene Family AT4G11880 52.3 1.6e-42 169.9
Cla05g00836 CCT,ECH 1 168 MADS-box Gene Family AT4G11880 60.6 4.7e-42 168.3
Cla10g01155 . 1 214 MADS-box Gene Family AT5G13790 53.1 4.9e-49 191.8
Cla10g00943 . 1 227 MADS-box Gene Family AT2G22630 52.4 1.0e-55 213.8
Cla01g01782 . 1 160 MADS-box Gene Family AT2G22630 66.9 2.8e-53 205.7
Cla04g00364 . 19 211 MADS-box Gene Family AT3G57390 50.3 4.0e-44 175.3
Cla01g00316 . 9 218 MADS-box Gene Family AT4G22950 58.7 3.0e-57 218.8
Cla05g00211 . 1 214 MADS-box Gene Family AT4G22950 54.8 1.0e-52 203.8
Cla06g00020 . 1 218 MADS-box Gene Family AT4G22950 54.3 1.7e-52 203.0
Cla05g00836 CCT,ECH 1 168 MADS-box Gene Family AT4G22950 59.8 1.5e-43 173.3
Cla01g00524 CCT,ECH 1 210 MADS-box Gene Family AT4G22950 52.1 5.6e-43 171.4
Cla07g01523 . 1 246 MADS-box Gene Family AT5G15800 73.4 8.5e-99 357.1
Cla06g00195 . 1 241 MADS-box Gene Family AT5G15800 59.8 1.2e-73 273.5
Cla08g01053 . 1 173 MADS-box Gene Family AT5G15800 69.5 1.9e-58 223.0
Cla04g01139 . 1 174 MADS-box Gene Family AT5G15800 53.4 2.5e-42 169.5
Cla05g00830 . 19 189 MADS-box Gene Family AT5G15800 55.2 6.2e-41 164.9
Cla06g00020 . 1 162 MADS-box Gene Family AT2G45660 71.0 5.1e-54 207.6
Cla05g00211 . 1 160 MADS-box Gene Family AT2G45660 67.5 1.5e-50 196.1
Cla01g00316 . 9 166 MADS-box Gene Family AT2G45660 65.2 2.9e-49 191.8
Cla01g00524 CCT,ECH 1 158 MADS-box Gene Family AT2G45660 65.2 9.6e-45 176.8
Cla05g00836 CCT,ECH 1 157 MADS-box Gene Family AT2G45660 60.5 5.2e-43 171.0
Cla10g00943 . 1 228 MADS-box Gene Family AT4G37940 52.6 4.3e-56 214.9
Cla01g01782 . 1 155 MADS-box Gene Family AT4G37940 66.5 4.9e-52 201.4
Cla08g01165 . 1 225 MADS-box Gene Family AT2G22540 56.5 3.9e-58 221.9
Cla10g00921 . 1 152 MADS-box Gene Family AT2G22540 59.6 1.8e-42 169.9
Cla08g01165 . 1 225 MADS-box Gene Family AT4G24540 56.8 2.3e-57 219.2
Cla10g00921 . 1 167 MADS-box Gene Family AT4G24540 53.2 1.8e-41 166.4
Cla07g01523 . 1 171 MADS-box Gene Family AT2G03710 66.9 1.2e-57 219.9
Cla08g01053 . 1 171 MADS-box Gene Family AT2G03710 65.1 7.5e-57 217.2
Cla06g00195 . 1 176 MADS-box Gene Family AT2G03710 63.8 2.7e-54 208.8
Cla06g00019 . 1 170 MADS-box Gene Family AT2G03710 54.6 1.2e-41 166.8
Cla07g01523 . 1 170 MADS-box Gene Family AT3G02310 86.5 7.0e-77 283.9
Cla06g00195 . 1 172 MADS-box Gene Family AT3G02310 77.9 1.3e-67 253.1
Cla08g01053 . 1 170 MADS-box Gene Family AT3G02310 66.7 2.0e-55 212.6
Cla04g01140 . 1 209 MADS-box Gene Family AT3G02310 52.6 4.7e-49 191.4
Cla06g00019 . 1 169 MADS-box Gene Family AT3G02310 61.6 4.0e-48 188.3
Cla05g00830 . 19 205 MADS-box Gene Family AT3G02310 51.6 3.1e-40 162.2
Cla01g00524 CCT,ECH 1 145 MADS-box Gene Family AT5G62165 68.3 4.0e-48 188.0
Cla05g00836 CCT,ECH 1 146 MADS-box Gene Family AT5G62165 64.4 4.9e-46 181.0
Cla06g00020 . 1 154 MADS-box Gene Family AT5G62165 55.8 2.5e-42 168.7
Cla01g00316 . 9 161 MADS-box Gene Family AT5G62165 56.2 2.8e-41 165.2
Cla05g00211 . 1 144 MADS-box Gene Family AT5G62165 62.5 2.8e-41 165.2
Cla10g00943 . 1 239 MADS-box Gene Family AT2G14210 53.8 2.1e-56 216.1
Cla01g01782 . 1 142 MADS-box Gene Family AT2G14210 66.4 9.8e-46 180.6
Cla03g00684 CCT 15 201 MADS-box Gene Family AT2G42830 72.5 3.5e-70 261.9
Cla02g01796 . 1 267 MADS-box Gene Family AT2G42830 57.1 3.7e-67 251.9
Cla01g02351 CCT 7 283 MADS-box Gene Family AT2G42830 51.0 6.7e-61 231.1
Cla08g00042 . 1 192 MADS-box Gene Family AT2G42830 58.9 1.2e-49 193.7
Cla06g00019 . 1 246 MADS-box Gene Family AT2G45650 64.8 1.2e-81 300.1
Cla07g01523 . 1 246 MADS-box Gene Family AT2G45650 50.4 2.1e-54 209.5
Cla05g00830 . 19 190 MADS-box Gene Family AT2G45650 59.8 7.8e-49 191.0
Cla08g01053 . 1 195 MADS-box Gene Family AT2G45650 51.2 3.1e-45 179.1
Cla01g00316 . 9 182 MADS-box Gene Family AT2G45650 52.3 1.5e-36 150.2
Cla01g02387 . 84 200 MADS-box Gene Family AT1G29960 55.6 7.9e-39 156.8
Cla04g01139 . 63 237 MADS-box Gene Family AT1G69120 53.5 1.3e-40 163.3
Cla05g00836 CCT,ECH 1 145 MADS-box Gene Family AT5G51870 57.2 4.6e-41 164.9
Cla01g00524 CCT,ECH 1 144 MADS-box Gene Family AT5G51870 56.0 2.8e-38 155.6
Cla04g01139 . 1 239 MADS-box Gene Family AT3G30260 52.0 1.6e-54 209.9
Cla04g01139 . 63 241 MADS-box Gene Family AT5G60910 54.7 1.6e-43 172.9
Cla06g00195 . 1 242 MADS-box Gene Family AT1G24260 72.9 8.0e-88 320.5
Cla07g01523 . 1 245 MADS-box Gene Family AT1G24260 59.8 5.8e-70 261.2
Cla08g01053 . 1 156 MADS-box Gene Family AT1G24260 66.9 5.1e-50 194.9
Cla06g00019 . 1 245 MADS-box Gene Family AT1G24260 50.2 6.6e-50 194.5
Cla04g01139 . 1 157 MADS-box Gene Family AT1G24260 54.3 8.1e-40 161.0
Cla05g00830 . 19 189 MADS-box Gene Family AT1G24260 51.7 5.8e-38 154.8
Cla05g01900 . 1 248 MADS-box Gene Family AT3G54340 55.6 3.8e-66 248.4
Cla11g01559 . 1 139 MADS-box Gene Family AT5G20240 71.9 2.4e-53 205.3
Cla11g01559 . 1 139 MADS-box Gene Family AT5G20240 71.9 2.4e-53 205.3
Cla05g01900 . 1 248 MADS-box Gene Family AT3G54340 55.6 3.8e-66 248.4
Cla03g00684 CCT 12 234 MADS-box Gene Family AT3G58780 65.5 1.3e-75 280.0
Cla02g01796 . 1 267 MADS-box Gene Family AT3G58780 57.9 4.6e-73 271.6
Cla01g02351 CCT 7 283 MADS-box Gene Family AT3G58780 52.1 1.9e-66 249.6
Cla07g01523 . 1 246 MADS-box Gene Family AT5G15800 73.4 8.5e-99 357.1
Cla06g00195 . 1 241 MADS-box Gene Family AT5G15800 59.8 1.2e-73 273.5
Cla08g01053 . 1 173 MADS-box Gene Family AT5G15800 69.5 1.9e-58 223.0
Cla04g01139 . 1 174 MADS-box Gene Family AT5G15800 53.4 2.5e-42 169.5
Cla05g00830 . 19 189 MADS-box Gene Family AT5G15800 55.2 6.2e-41 164.9
Cla07g01523 . 1 171 MADS-box Gene Family AT2G03710 66.9 1.2e-57 219.9
Cla08g01053 . 1 171 MADS-box Gene Family AT2G03710 65.1 7.5e-57 217.2
Cla06g00195 . 1 176 MADS-box Gene Family AT2G03710 63.8 2.7e-54 208.8
Cla06g00019 . 1 170 MADS-box Gene Family AT2G03710 54.6 1.2e-41 166.8
Cla07g01523 . 1 170 MADS-box Gene Family AT3G02310 86.5 7.0e-77 283.9
Cla06g00195 . 1 172 MADS-box Gene Family AT3G02310 77.9 1.3e-67 253.1
Cla08g01053 . 1 170 MADS-box Gene Family AT3G02310 66.7 2.0e-55 212.6
Cla04g01140 . 1 209 MADS-box Gene Family AT3G02310 52.6 4.7e-49 191.4
Cla06g00019 . 1 169 MADS-box Gene Family AT3G02310 61.6 4.0e-48 188.3
Cla05g00830 . 19 205 MADS-box Gene Family AT3G02310 51.6 3.1e-40 162.2
Cla03g00684 CCT 15 201 MADS-box Gene Family AT2G42830 72.5 3.5e-70 261.9
Cla02g01796 . 1 267 MADS-box Gene Family AT2G42830 57.1 3.7e-67 251.9
Cla01g02351 CCT 7 283 MADS-box Gene Family AT2G42830 51.0 6.7e-61 231.1
Cla08g00042 . 1 192 MADS-box Gene Family AT2G42830 58.9 1.2e-49 193.7
Cla06g00019 . 1 246 MADS-box Gene Family AT2G45650 64.8 1.2e-81 300.1
Cla07g01523 . 1 246 MADS-box Gene Family AT2G45650 50.4 2.1e-54 209.5
Cla05g00830 . 19 190 MADS-box Gene Family AT2G45650 59.8 7.8e-49 191.0
Cla08g01053 . 1 195 MADS-box Gene Family AT2G45650 51.2 3.1e-45 179.1
Cla01g00316 . 9 182 MADS-box Gene Family AT2G45650 52.3 1.5e-36 150.2
Cla04g01139 . 63 237 MADS-box Gene Family AT1G69120 53.5 1.3e-40 163.3
Cla04g01139 . 63 241 MADS-box Gene Family AT5G60910 54.7 1.6e-43 172.9
Cla06g00195 . 1 242 MADS-box Gene Family AT1G24260 72.9 8.0e-88 320.5
Cla07g01523 . 1 245 MADS-box Gene Family AT1G24260 59.8 5.8e-70 261.2
Cla08g01053 . 1 156 MADS-box Gene Family AT1G24260 66.9 5.1e-50 194.9
Cla06g00019 . 1 245 MADS-box Gene Family AT1G24260 50.2 6.6e-50 194.5
Cla04g01139 . 1 157 MADS-box Gene Family AT1G24260 54.3 8.1e-40 161.0
Cla05g00830 . 19 189 MADS-box Gene Family AT1G24260 51.7 5.8e-38 154.8
Cla04g01139 . 1 245 MADS-box Gene Family AT1G26310 56.1 2.0e-68 256.1
Cla07g01524 . 1 253 MADS-box Gene Family AT1G26310 51.7 1.1e-58 223.8
Cla08g01054 . 1 159 MADS-box Gene Family AT1G26310 65.9 1.3e-56 216.9
Cla08g01053 . 1 180 MADS-box Gene Family AT1G26310 54.6 1.2e-44 177.2
Cla07g01523 . 1 173 MADS-box Gene Family AT1G26310 54.5 4.2e-42 168.7
Cla06g00019 . 1 159 MADS-box Gene Family AT1G26310 58.8 6.1e-41 164.9
Cla03g00684 CCT 20 197 MADS-box Gene Family AT4G09960 74.7 5.8e-67 251.1
Cla08g00042 . 1 236 MADS-box Gene Family AT4G09960 58.9 2.1e-64 242.7
Cla01g02351 CCT 9 238 MADS-box Gene Family AT4G09960 57.0 4.5e-59 224.9
Cla02g01796 . 1 216 MADS-box Gene Family AT4G09960 58.8 5.8e-59 224.6
Cla08g00049 . 1 189 MADS-box Gene Family AT1G71692 52.8 8.5e-49 190.7
Cla06g00019 . 1 242 MADS-box Gene Family AT3G61120 56.3 4.6e-62 235.0
Cla05g00830 . 19 189 MADS-box Gene Family AT3G61120 50.3 6.8e-42 167.9
Cla07g01523 . 1 173 MADS-box Gene Family AT3G61120 53.8 1.2e-41 167.2
Cla06g00195 . 1 170 MADS-box Gene Family AT3G61120 55.8 2.0e-41 166.4
Cla04g01139 . 1 168 MADS-box Gene Family AT3G61120 51.5 3.9e-37 152.1
Cla08g01053 . 1 173 MADS-box Gene Family AT3G61120 50.9 3.9e-37 152.1
Cla01g00316 . 9 216 MADS-box Gene Family AT4G11880 57.3 1.9e-54 209.5
Cla05g00211 . 1 214 MADS-box Gene Family AT4G11880 53.4 4.7e-50 194.9
Cla06g00020 . 1 218 MADS-box Gene Family AT4G11880 53.4 5.2e-49 191.4
Cla01g00524 CCT,ECH 1 210 MADS-box Gene Family AT4G11880 52.3 1.6e-42 169.9
Cla05g00836 CCT,ECH 1 168 MADS-box Gene Family AT4G11880 60.6 4.7e-42 168.3
Cla10g01155 . 1 214 MADS-box Gene Family AT5G13790 53.1 4.9e-49 191.8
Cla10g00943 . 1 227 MADS-box Gene Family AT2G22630 52.4 1.0e-55 213.8
Cla01g01782 . 1 160 MADS-box Gene Family AT2G22630 66.9 2.8e-53 205.7
Cla04g00364 . 19 211 MADS-box Gene Family AT3G57390 50.3 4.0e-44 175.3
Cla01g00316 . 9 218 MADS-box Gene Family AT4G22950 58.7 3.0e-57 218.8
Cla05g00211 . 1 214 MADS-box Gene Family AT4G22950 54.8 1.0e-52 203.8
Cla06g00020 . 1 218 MADS-box Gene Family AT4G22950 54.3 1.7e-52 203.0
Cla05g00836 CCT,ECH 1 168 MADS-box Gene Family AT4G22950 59.8 1.5e-43 173.3
Cla01g00524 CCT,ECH 1 210 MADS-box Gene Family AT4G22950 52.1 5.6e-43 171.4
Cla06g00020 . 1 162 MADS-box Gene Family AT2G45660 71.0 5.1e-54 207.6
Cla05g00211 . 1 160 MADS-box Gene Family AT2G45660 67.5 1.5e-50 196.1
Cla01g00316 . 9 166 MADS-box Gene Family AT2G45660 65.2 2.9e-49 191.8
Cla01g00524 CCT,ECH 1 158 MADS-box Gene Family AT2G45660 65.2 9.6e-45 176.8
Cla05g00836 CCT,ECH 1 157 MADS-box Gene Family AT2G45660 60.5 5.2e-43 171.0
Cla10g00943 . 1 228 MADS-box Gene Family AT4G37940 52.6 4.3e-56 214.9
Cla01g01782 . 1 155 MADS-box Gene Family AT4G37940 66.5 4.9e-52 201.4
Cla08g01165 . 1 225 MADS-box Gene Family AT2G22540 56.5 3.9e-58 221.9
Cla10g00921 . 1 152 MADS-box Gene Family AT2G22540 59.6 1.8e-42 169.9
Cla08g01165 . 1 225 MADS-box Gene Family AT4G24540 56.8 2.3e-57 219.2
Cla10g00921 . 1 167 MADS-box Gene Family AT4G24540 53.2 1.8e-41 166.4
Cla01g00524 CCT,ECH 1 145 MADS-box Gene Family AT5G62165 68.3 4.0e-48 188.0
Cla05g00836 CCT,ECH 1 146 MADS-box Gene Family AT5G62165 64.4 4.9e-46 181.0
Cla06g00020 . 1 154 MADS-box Gene Family AT5G62165 55.8 2.5e-42 168.7
Cla01g00316 . 9 161 MADS-box Gene Family AT5G62165 56.2 2.8e-41 165.2
Cla05g00211 . 1 144 MADS-box Gene Family AT5G62165 62.5 2.8e-41 165.2
Cla10g00943 . 1 239 MADS-box Gene Family AT2G14210 53.8 2.1e-56 216.1
Cla01g01782 . 1 142 MADS-box Gene Family AT2G14210 66.4 9.8e-46 180.6
Cla01g02387 . 84 200 MADS-box Gene Family AT1G29960 55.6 7.9e-39 156.8
Cla05g00836 CCT,ECH 1 145 MADS-box Gene Family AT5G51870 57.2 4.6e-41 164.9
Cla01g00524 CCT,ECH 1 144 MADS-box Gene Family AT5G51870 56.0 2.8e-38 155.6
Cla04g01139 . 1 239 MADS-box Gene Family AT3G30260 52.0 1.6e-54 209.9
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000442 3 7 2 1 3 2 5 3 3 3 4 3 5 2 3 8 4 5 5 4 3 3 3 3 3 3 3 9 5 2 112
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
60468 PF01486 K-box 1.10E-23 No_clan Cla TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cla01g01782 Cla_Chr01 FPKM 0.0 0.0 0.0 0.0 5.145659 5.691592 4.952656 0.0 0.0 0.0