Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g01784 ATGGCAGCAACAAAGCCTAGGACAAGCAGCTTCTCACGCAACTTTTCTTCTGCGCATTCATCTAAGACGGCAGGACTTAAACATGGTCCCAATGGCACCACATTCATCTCATCCGGAATACCAGACCTTGACAAGATTCTTTTTGGTGGCTTTCCTTTGGGAAGCTTGGTCTTGGTGATGGAAGATGCAGAAGCTCCTCATCACATGCTTTTATTGCGAAATTTTATGTCTCAGGGACTTGTTCACAACCAACCTCTTCTTTATGCTAGTCCATCCAAAGACCCAAGAGGATTCTTGGGTACTTTGCCAAGCCCAGGGACATCAAAAGACGATAAATCTCGTGATAATTCTACCGAACAGGAAAAGGGCTTGAGGATTGCTTGGCAATATAAGAAGTATTTTGGAGATGATCAAGAGAGCGCCAACATTGATAGTAAATACGAGTTTTGCAACGACTTTGATTTGCGAAGGCCATTTGACAGACATTTTTTCAGCGGAAAGCACGTAGAATGTGTTAGTATTCTAGATTCTTCTAGTCTTTCTACTCTCCATGATCGTTGTGCCACATTCCTATCACAAGTTCCAAGAAATGATGGCAATATATCCTCTGCTGGCCGTATTGCCATTCAATCATTAAGTGCTCCACAATGCGATCACTCCAACATGGAATGGGAAATGCTTTCGTTTTTAAGGTCTCTGAAAAGCATGCTAAGGTCCTCAAATGCAGTAGCTGTAGTGACGTTTCCACCTTCTCTTCTTTTGCCGTCCATTTCTAAAAGATGGCAGCACATGGCAGATACCTTGCTTTCTGTGAGAGCAATCCCAGATGAGGATAAGGAATTAGCAAAGCTCCTCACTGGTTACCAAGACATGGTTGGTCTTCTCAATGTGCATAAAGTAGCTCAAATCAATACACAGGTTCCAAAGATCCTTGAGGCGACTACGTTCTCTATAAAGTTGCAAAAGAGAAGGTATTTAGTTTTAGAATGTCTTAACCAAGCGCCTATCGATGGTTCAAGCGGCAGCTCATATGGCTCTACTGGGAGTTGTTCTGGGTCGTCTAAGACAGGTTCTCTCGAATTTACGATGGGGAAATCACCGGCGGAAGAGCATCCTAAGAAGGCTTTTGGATGGGCTGCCTCAGATACCTCCGGCCTTCTTTCTCCATTTCATTTCTCCAGAAGAGAAACAGGGGAAAATGATGTAGCTTTTAAAGTTCTTTACTGTGGAATTTGCCATTCTGACCTTCACATGGTGAAGAATGAGTGGGGAACTACCATTTACCCTATCGTTCCTGGTCATGAAATCGTGGGCGAGGTAACAGAGGTTGGAAGCAAAGTAAAGAACTTCAAGGTCGGAGACAAAGTTGGCGTAGGATGTATGGTTCAATCCTGCCGCTCCTGTGATAACTGTTCCAACGACCTCGAGAACTATTGCCCCAAAATGATCCTCACCTACTCCGCCAAGAACACTGACGGGACCATAACCTACGGAGGATACTCCGACTGTATGGTCGCTGACGAGCATTTCATTGTTCGCATTCCCGATGGCATCCCTCTACATGCTGGGGCTCCCCTGCTGTGCGCTGGTATCACAGTTTACAGCCCCTTGAGATACTTTGGACTTGACAAGCCTGGAATGCACATCGGCGTGGTTGGCCTCGGTGGGCTTGGCCACGTTGCCGTCAAATTTGCTAAGGCCTTCGGCGCTAAGGTTACTGTGATTAGTACCTCGCCTAATAAGAAGCAGGAGGCTATTGAACATCTTGGGGCTGATTCATTCTTGGTCAGCCGTGATCAAGAGCAATTGCAGGCTGCTAGGGGGACTTTGGATGGTATCATAGACACAGTCTCTGCTGCACATCCCCTTCTTCCTCTGCTGTCGCTTGTAAAAACGCATGGAAAATTTGTTATGGTTGGAGCACCAGAGAAGCCACTTGAGCTCCCGGCCTTTGCTCTTATTGGGGGTAGGAAAACAATGGCCGGTAGTTGCATTGGAGGGATGAAGGAAACACAAGAGATGATTGATTTTGCTGCCAAACACAACATTACGGCAGATGTCGAGGTGATTCCAATGGCAGACGTCAACAAGGCAATGGAACGAATGCTGAAACAGGATGTCAAGTATCGGTTCGTCATCGACATTGCCAACTCATTGAAGCCGTAG 2166 46.08 MAATKPRTSSFSRNFSSAHSSKTAGLKHGPNGTTFISSGIPDLDKILFGGFPLGSLVLVMEDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSKDPRGFLGTLPSPGTSKDDKSRDNSTEQEKGLRIAWQYKKYFGDDQESANIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSSLSTLHDRCATFLSQVPRNDGNISSAGRIAIQSLSAPQCDHSNMEWEMLSFLRSLKSMLRSSNAVAVVTFPPSLLLPSISKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVHKVAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDGSSGSSYGSTGSCSGSSKTGSLEFTMGKSPAEEHPKKAFGWAASDTSGLLSPFHFSRRETGENDVAFKVLYCGICHSDLHMVKNEWGTTIYPIVPGHEIVGEVTEVGSKVKNFKVGDKVGVGCMVQSCRSCDNCSNDLENYCPKMILTYSAKNTDGTITYGGYSDCMVADEHFIVRIPDGIPLHAGAPLLCAGITVYSPLRYFGLDKPGMHIGVVGLGGLGHVAVKFAKAFGAKVTVISTSPNKKQEAIEHLGADSFLVSRDQEQLQAARGTLDGIIDTVSAAHPLLPLLSLVKTHGKFVMVGAPEKPLELPAFALIGGRKTMAGSCIGGMKETQEMIDFAAKHNITADVEVIPMADVNKAMERMLKQDVKYRFVIDIANSLKP 721
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 32783667 32793670 - ClCG01G018250.2 Cla01g01784 265373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g01784 721 SMART PKS_ER_names_mod 385 713 IPR020843 GO:0016491
Cla01g01784 721 Pfam PAXNEB protein 21 361 IPR008728 GO:0002098|GO:0033588
Cla01g01784 721 PANTHER ALDEHYDE REDUCTASE 364 720 - -
Cla01g01784 721 CDD CAD1 376 714 - -
Cla01g01784 721 PANTHER LOW QUALITY PROTEIN: 8-HYDROXYGERANIOL DEHYDROGENASE-LIKE 364 720 - -
Cla01g01784 721 Pfam Zinc-binding dehydrogenase 556 679 IPR013149 -
Cla01g01784 721 SUPERFAMILY GroES-like 384 546 IPR011032 -
Cla01g01784 721 Gene3D - 378 715 - -
Cla01g01784 721 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 277 IPR027417 -
Cla01g01784 721 Pfam Alcohol dehydrogenase GroES-like domain 400 513 IPR013154 -
Cla01g01784 721 MobiDBLite consensus disorder prediction 1 31 - -
Cla01g01784 721 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 433 447 IPR002328 GO:0008270|GO:0016491
Cla01g01784 721 MobiDBLite consensus disorder prediction 92 122 - -
Cla01g01784 721 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 519 683 IPR036291 -
Cla01g01784 721 Gene3D - 529 685 - -
Cla01g01784 721 Gene3D - 19 338 IPR027417 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01784 Cla-Chr1:32783667 Cla02g00079 Cla-Chr2:827566 6.78E-171 dispersed
Cla01g01784 Cla-Chr1:32783667 Cla02g00635 Cla-Chr2:7140410 1.23E-118 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g01784 - K23232 csv:101222715 682.945