Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g01884 ATGGCGGGTATTCTTAGCGCTTTGAGAGTTCTAATGGCGTCCCATACTCCTCCTCTTGACGCCTTGGTTGTTCCTTCTGAGGACTATCACCAGAGTGAATATGTATCTGCGAGAGATAAACGACGTGAATTTGTGTCAGGTTTCACCGGAAGTGCTGGTCTGGCCCTTGTAACTCAGAGAGAAGCATTACTGTGGACCGATGGGCGGTATTTCCTGCAGGCAATTCAACAGCTTAGTGATCAGTGGAAACTTATGCGAATGGGAGAGGATCCTTCTGTAGATCTCTGGATGGCTGAGAATCTTCCAGCAGATGCAGCTGTTGGAGTGGATCCTTGGTGTGTGTCAGTGGACACAGCACAAAAATGGATTCACGCATTTTCCAAGAAGCAGCAGAAGCTGGTTCAAACCACCCCGAACTTAGTTGATGAAGTTTGGAAGAACCGACCACCACCAGAAATAAATCCTGTTATGATACACCCACTGGAATATACTGGCCGCTCTGTTGAAGATAAGTTGAAGACTTTGAGAACAAGGCTTTTGCAGGAGAAAGCTCATGGTTTAATTGTGACTGGACTTGATGAAGTAGCTTGGTTGTACAACATCCGTGGGAGTGATGTGTCATACTGTCCAGTTGTACATGCATTTGCAATAGTGACACTCAATTCAGCGTTCTTTTATGTGGACAAGAGGAAGGTGTCTGATGAGGTGCGCTTGTACATGGAGCAAAATGGAATTGAAGTTCGGGATTATAGTGCAGTAATAACAGATGTGTCCTTACTTGCATCTAATCAACTTAACTTGTCATCTTTTGTGAAAGGACCTGAAGTTAGGGCTAATATGGAAGTAGAACTCAGTTCGATTGACATAGCAGGATCTAATGGAACTAAAGTAGAAAGCCAGAGTTCTGGCCTCATATGGCTTGATCCTGCCCAATGCTGCTATGTTTTGTATTCTAAACTGAACTCTGATAAGGTTCTCCTGCAACAGTCGCCATTGGCCCTTGCGAAAGCTCTAAAGAACTCTGTTGAGTTGGACGGACTAAAGAAGGCACACATTCGGGATGGTGCAGCTGTTGTACAATATCTTGTGTGGTTGGACAAGCAGCATTTTAGAGGCCTAAGTTTCCCTACTATTTCATCTGTTGGTTCAAATGCTGCAATTATTCATTATGGACCACAAGCAGAGACATGTGCTGAGTTGGATCCTGAAAGCATCTATCTTTTTGACTCGGGAGCTCAGTATTTGGACGGAACAACCGATATCACGCGGACAGTCCATTTTGGATTACCTTCAGCACATGAGAAAGCTTGTTATACTGCAGTTCTCAAAGGCCATATTGCTTTGGGAAATGCAAGATTTCCAAATGGCACAAATGGCCACTCATTGGACATTCTTGCTCGAGTTCCCTTGTGGAAGGATGGTCTGGATTATCGACATGGCACTGGCCATGGAATTGGTTCTTTCCTTAATGTTCATGAAGGACCCCATTTAATTAGTTTCAGACCACAGGCTCGAAATGTTCCTCTTCAAGCTTCAATGACTGTTACGGATGAGCCTGGCTATTACGAGGATGGTGCCTTCGGTATTAGGTTGGAGAATGTACTTGTAGTGAAGGATGCCGATACAAAATTTAATTTTGGCGATAAAGGCTACTTATCATTCGAGCACATAACATGGGCACCATACCAAAGAAAGTTGATCAACACAAGTCTTCTCACATCTGAAGAATTGGATTGGGTGAACACTTACCATTCAGAATGCAGGGATATTCTTGCTCCATATTTGGATGAATCCGAGAAGGAGAGCTCCGAGGAGAAGTCCAGAAAATGCCAAGGGTTGAACTCAATTTTTGCACAACATAATCTCCCACCTAAAGAACAATGGCTTACTTTGAGAGGGGAAGAGCCACTAGTTATTGCAAGAGGAGGGTTATCTGGAGTGTTTCCAGAATCAAGCCCTTTTGCAAATCAAATGGCTTTGGTTTCAGGTTTACATAACACAGTTTTGTATTGTAATCTTCAACTCACCAAAGATGCGGTAGGCATTTGCTTAACTGATCTCAGGCTTCAAAATTCAACCAATATTGAAGATGTTTTCCCTGGGGAACATAAGTCTTATAATGTTAATGGAAAGATTATCAAAGGATGGTTTTCTGTTGATTACATGTCTAGGACTCTCTTTAACAAACTCTTCATGATTCAAAGTGTCCTCTCTCGTCCTAGTCTCTACGACGGTACTTTGCCAATCGCGGCTGTCGAAGATGTCATGGGGATTAAACCGACTCAGTTTTGGTTGAATGCCGAGCACGAAGCATTCTACGCTGAGCACAATTTGAGTGTATCATTATACCTTCAAAAGGCATTGAGAATGATGCGAATAAACTTTGTGTCATCTTCAGAGATTGGAATATTGAAAGGGATAAGTGGGAGTGTGAACAAAGCTAGAACAAAGCTGGTCTTCAGATTCTTAGAAGCCACTGAAATAGAACCAACAACAAAGAAAACATATGGTGTACTGGCTCAAGAACTTCCCATGATTAAGACATTTGCCTCAGGAATTCTCGTCAGAAAAGAATACATTTGGCCAATTGGTCAAGACAAGTATGTGCAGCCTGCAACAACTCTTGTCATGGATGCTCATAAGCTTGGCTTGGAAGTTTATGCTTCTGGCTTTGCAAATGATGCCATTGTTGGTTACAATTATAGCTATGATCCAATCCGTGAATACCTTCAGTATTTTGATAATGGCCATTTTGCTGTTGATGGGGTCCTTACTGATTTTTCTCCTGCTGCTTCTCAAGCCATTGCCTGCTATTCGACTTTTCGCAACAATGGCAAGCCTCAACCTGGATTAGAGCAAGCATTGGTGATAAGCAGCAATGGGGCAAGTGGGGATTTCCCAGGCTCAACTGACCTTGCTTACCAAAGAGCAATTGATGATGGGGCGGATGTTATTGATTGTTCAGTTCAATTATCAAAAGATGGAGTTCCTTTCTGTATGGATATGGCAGATCTTTTGACAGGTACAACTGTTGTCACTTCTTTCTCAGCTCGAACTACAACTATCCCCGAAGTTCAATCTGAAGCTGGAATCTTCTCTTTTGATCTTACTTGGGCGGAGATTTTGACTCTCAAACCTCAAATTACAAACCCTTTCATGGCTTCTTCTGGCCTTGCTCGTAATCCAGCCTTTAAAAACAAGGGCAAGTTCATGACTCTCCCTGAGTTTCTAGAGTTTGCTAAAGCCAAAGCTGTTTCTGGGATTATGATCAACATCCAAAACGCGGCGTATTTGGCTTCAAAGAAAGGTCTAGACATGGTGGGAACTGTCTCCACTGCCTTAATAAATTCCACTTTTGACAAACAATCAACACAACAAGTTTTCATTAGATCAGATGATACTTCTGTGTTGTCTTTTTTCAAGGCAAAGTTCCCAAGTTTCATTAGAGTTTTAACTGTCGACACAAAGATTGGTGATGCCCCAAAAGATGCTCTTGAAGAGATCAAACGCTATGCCGAAGTTGTAGCCATTCCTCGTGGCTCTATCATTGAAATAACAAACTATTTCACTACTGGCCTCACCAAAGTAGTTGCTGAAATTAAGGCTTCAAATCTCTCTGTCTTTGTTTATGTCATGAGAAATGAATATGTTTCCTTGGCCTTTGATTACTACTCTGAAGCCTCCACGGAAATCGCTACCTTTGTCGACTACTTCCACGTTGATGGCATCATTACCGAATTCCCCAATACTGCTAAACGATACATGACATGTCCGTGCCGACCGACTCAGCTGAACCCGAATGGAGCTCCATATATAATTGTACCGCCTGAAATTGGTTTACTCATGGAAATGGTGGCTCCAGAGGCTAAACCACCTACTGATCCTCCATTGCCGCCATTGGATGCTGATAATGTCATTGATCCACCGCTCCCGGCGGTGGTCAAAATGTCAGCCAGCAATCCTTCAGGTGTTGCCGATGGGCCTGCCGCAGCCACCCCATCAGCCGCTGTATCAAATGTTGCTAACTTGTTTCTTTCTTTACTATCAGTTGTGGTGCTTAACTTCTTCATTTCACACTTCTGCATTGTAATAATCAATACTCATTAA 4107 42.8 MAGILSALRVLMASHTPPLDALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALVTQREALLWTDGRYFLQAIQQLSDQWKLMRMGEDPSVDLWMAENLPADAAVGVDPWCVSVDTAQKWIHAFSKKQQKLVQTTPNLVDEVWKNRPPPEINPVMIHPLEYTGRSVEDKLKTLRTRLLQEKAHGLIVTGLDEVAWLYNIRGSDVSYCPVVHAFAIVTLNSAFFYVDKRKVSDEVRLYMEQNGIEVRDYSAVITDVSLLASNQLNLSSFVKGPEVRANMEVELSSIDIAGSNGTKVESQSSGLIWLDPAQCCYVLYSKLNSDKVLLQQSPLALAKALKNSVELDGLKKAHIRDGAAVVQYLVWLDKQHFRGLSFPTISSVGSNAAIIHYGPQAETCAELDPESIYLFDSGAQYLDGTTDITRTVHFGLPSAHEKACYTAVLKGHIALGNARFPNGTNGHSLDILARVPLWKDGLDYRHGTGHGIGSFLNVHEGPHLISFRPQARNVPLQASMTVTDEPGYYEDGAFGIRLENVLVVKDADTKFNFGDKGYLSFEHITWAPYQRKLINTSLLTSEELDWVNTYHSECRDILAPYLDESEKESSEEKSRKCQGLNSIFAQHNLPPKEQWLTLRGEEPLVIARGGLSGVFPESSPFANQMALVSGLHNTVLYCNLQLTKDAVGICLTDLRLQNSTNIEDVFPGEHKSYNVNGKIIKGWFSVDYMSRTLFNKLFMIQSVLSRPSLYDGTLPIAAVEDVMGIKPTQFWLNAEHEAFYAEHNLSVSLYLQKALRMMRINFVSSSEIGILKGISGSVNKARTKLVFRFLEATEIEPTTKKTYGVLAQELPMIKTFASGILVRKEYIWPIGQDKYVQPATTLVMDAHKLGLEVYASGFANDAIVGYNYSYDPIREYLQYFDNGHFAVDGVLTDFSPAASQAIACYSTFRNNGKPQPGLEQALVISSNGASGDFPGSTDLAYQRAIDDGADVIDCSVQLSKDGVPFCMDMADLLTGTTVVTSFSARTTTIPEVQSEAGIFSFDLTWAEILTLKPQITNPFMASSGLARNPAFKNKGKFMTLPEFLEFAKAKAVSGIMINIQNAAYLASKKGLDMVGTVSTALINSTFDKQSTQQVFIRSDDTSVLSFFKAKFPSFIRVLTVDTKIGDAPKDALEEIKRYAEVVAIPRGSIIEITNYFTTGLTKVVAEIKASNLSVFVYVMRNEYVSLAFDYYSEASTEIATFVDYFHVDGIITEFPNTAKRYMTCPCRPTQLNPNGAPYIIVPPEIGLLMEMVAPEAKPPTDPPLPPLDADNVIDPPLPAVVKMSASNPSGVADGPAAATPSAAVSNVANLFLSLLSVVVLNFFISHFCIVIINTH 1368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 33642313 33659027 - ClCG01G019310.2 Cla01g01884 265473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g01884 1368 ProSiteProfiles GP-PDE domain profile. 636 935 IPR030395 GO:0006629|GO:0008081
Cla01g01884 1368 PANTHER XAA-PRO AMINOPEPTIDASE 1 3 367 - -
Cla01g01884 1368 PANTHER XAA-PRO AMINOPEPTIDASE 1 367 601 - -
Cla01g01884 1368 SUPERFAMILY Creatinase/aminopeptidase 340 576 IPR036005 -
Cla01g01884 1368 PANTHER AMINOPEPTIDASE P1 3 367 - -
Cla01g01884 1368 CDD APP 346 547 IPR033740 GO:0070006
Cla01g01884 1368 CDD GDPD_SHV3_repeat_2 954 1254 - -
Cla01g01884 1368 Pfam Glycerophosphoryl diester phosphodiesterase family 643 927 IPR030395 GO:0006629|GO:0008081
Cla01g01884 1368 Pfam Glycerophosphoryl diester phosphodiesterase family 960 1250 IPR030395 GO:0006629|GO:0008081
Cla01g01884 1368 Gene3D - 2 145 IPR029149 -
Cla01g01884 1368 Pfam Creatinase/Prolidase N-terminal domain 5 142 IPR000587 GO:0016787
Cla01g01884 1368 ProSitePatterns Aminopeptidase P and proline dipeptidase signature. 479 491 IPR001131 -
Cla01g01884 1368 ProSiteProfiles GP-PDE domain profile. 954 1255 IPR030395 GO:0006629|GO:0008081
Cla01g01884 1368 CDD GDPD_SHV3_repeat_1 636 934 - -
Cla01g01884 1368 Pfam Metallopeptidase family M24 354 538 IPR000994 -
Cla01g01884 1368 Pfam Creatinase/Prolidase N-terminal domain 147 343 - -
Cla01g01884 1368 PANTHER AMINOPEPTIDASE P1 367 601 - -
Cla01g01884 1368 Pfam C-terminal region of peptidase_M24 551 599 IPR032416 -
Cla01g01884 1368 Gene3D Creatinase/methionine aminopeptidase superfamily 337 614 IPR036005 -
Cla01g01884 1368 SUPERFAMILY Creatinase/prolidase N-terminal domain 41 129 IPR029149 -
Cla01g01884 1368 Gene3D - 146 335 IPR029149 -
Cla01g01884 1368 SUPERFAMILY PLC-like phosphodiesterases 955 1255 IPR017946 GO:0006629|GO:0008081
Cla01g01884 1368 SUPERFAMILY PLC-like phosphodiesterases 635 933 IPR017946 GO:0006629|GO:0008081
Cla01g01884 1368 Gene3D Phosphatidylinositol (PI) phosphodiesterase 953 1256 IPR017946 GO:0006629|GO:0008081
Cla01g01884 1368 Gene3D Phosphatidylinositol (PI) phosphodiesterase 634 935 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01884 Cla-Chr1:33642313 Cla09g02041 Cla-Chr9:37989207 0 dispersed
Cla01g01884 Cla-Chr1:33642313 Cla04g01152 Cla-Chr4:26727140 5.41E-11 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g01884 - K01262 csv:101216172 1258.43