Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g01942 ATGTCATCTCAACTCCATACTGTCGAAAACCCTAGAAAATGGCGCTTCACATGGGAAGCCCAATCCCATATACCAACCCTACGTCTATTGCTCTTCGATTCCTATACCAATCCTTCTCTACAATGTCAGAATCTCAAGGTTCATCTCAATCTCCAGGAGTCCGTTGTATCCGTGGCTTGGTTTCAAGACCTCGATATGTCGATTCGAGTTCCTATGCCTCCGGTTTTGGTTGATGCTGAGTCGCCTCTGAGTTTTAGAGCTTTCGAAGACCATATTGAGGTCAAGCTCGTCTTGCTTCTTCCGGTTGATCACCCAATTATTCTCAACTTCGACAATGTGCTGGACTTCTCCCAAGAGCGAGGAAATAGCCACTCCAAGGCGTCGAAGCCACTTTCGATGGATTCTGATCAAATCAGTTTATCCCGCAGTGGTGGCGTCCATTTTTATTGCAGAAATTGTTCTTTCAGGCTGAGTAAATCCCCTCTCAGAGATTTTGTTGAAATGCCATCAGTCAACTGGCGAGAGGTGGCTGATAACTGGTTTGGGTCTTGCTGCTGCTCTTTCGGGGGGATAAGCGAGGAGCTGGTTACTAGGTACACAAATTCCTATAGATGTGCAAAGGGTGTCTGCCTACTCACTCTAACGACTATTACTCTTTCCAAGGATGACCTTGTTGGACGTGTGTTCTCGGACTATGATGGAACCCGAGAATTCAAGGATGAATCAGATTTGAATGATGGCAATTCGTTAACTGAAGCTAAGCAGAAATCACCATGTAATCATACATCTGTAGAGAAGGTAGAATCTAAGCAGTTAAATTATAATAACCTTGTTGCAAACATGAAGGTTAATGCTGCTGAGAAGGGAAGTGATGAAGTTGATTCACCTGTTGTGACTCCAATTCCTGACTGCTGTCATCATGAAGAAAGTAATGTACTTCATCATCTTGATAGGGATTGCATGCATCACACATGCGGCACATATAATTTAGACCCAAAGCCTGTTAATTCTGTAGATATTTCAGACGATCAGAGATCATTTCTTAATGGTTTTCTTGGAAATATCTTTATGGCTAGACTGTCAAATCTTTCAGCAGATTTTGAGTGGGCTGAGTTCTTTTGCCCCCAGTGCTCAACTCTGATTGGGGCTTACCCTTGCAGAAATGGCTGTGGACCTACAGACGGTGGAGTTCGACTTTTTAAATGTTATGTCTCAACATGTTTAACAGCTGAATCTGGAAATTTGTTGAGGTCAGCGTATTGTTATGTCATGCCTTTCTTTGATGCAGTAAGTGACTTTGAGATATTTTATATTTCATTGAGTGCTCAAGGTTCGCTGACTTATGCGCACAGGGAGTACACGTTGGAAAGAATGTTTGCAAATCAGCTACTGGAAAGTGCAAATGAAGAATCATCATTTCGTACTGTGGTTAAGGAGTTGAAAACCAAGTCTCCCATGCTGCACATTGTTCTCATCAATTCAAATTCTTGGTCGTGTAGTGGTTATTGTTTGGGCATGGAGGGTACTGCAGAATTTGTTCCGAAGGTGGAATTAAATCCAATCATCAAGGTGCTATTCTCAGATTGCAACAAAAGTGCAGAATCTCACTTGAGGAAACTTGAAGAGTGGGTGACAAAAGATATAGCAGATGAAGTTTTTATGTTAGCCCATCAAATAGAGGAATTAGTTGAAATCCTAGTTTCAAGAAACGACACACTTCCATCTTCATGTTCTTCCCTTGATGGTTTAACTTTGACATCTATCCTGAGTTCTCGAAATCCAGCCCTCAGATTCAGTAGAGAGCAACAAAACGGAGCTATTCACTTCAAGGTTTCGGGTGTCCTTTTACTGACTGTTGAGGTGAATGCAATTGCAGTGCCAAGTTCCAGTTGCTATGCTTTTGACAATTCTAGTCACATTGTTGACTTTGGATATGTAGATTTTGGTCGGTTTGATAAATTCAATTACTTCGTCTCTGGTTCAGGACATGCCAACTTTGTTCAAGGTTATTACTATGGTGACCTGACTTCTTGTGAGCAGAGTTATGACAAATTGGGGAGGACTGCGCTGGTAAATGTTATATGTGGAAGTTGTTTAAATGGGCAATGTAAAGGTGGTCTGGGATGCATCTGCAACATCACTTATGAGTCCACTTGCAGTTGCACCACCTCCCCTGTGCTTTGTTCTTTGAACTCGAGAAACATGGACTGGGGGCTTATCGGCCTGATAGAGAAAATTCTCAATAATATTACATTTTGTGTTAGTATTGTAGTCTTAATCAAATTTAAACCAGTTATTGTTGATCTTGCCATCCCTTGTGCGACACAAGGCCCACGAGTTTTCAAAGGATTTACTGTTGGTTTTCACCCCCGATCCTGGGAAATTGTTTACAATGGCTTGACTCAACTAGGCTATGAGAAGCCACACCATGCATTCAGCTTCAGCACAGAGCAGACTGGTGTGGTTCTTTATATGACTGCCATTGCATCCCTTTCTTCTTTGGTACAGAAACCGATCATTCAGGTTTTCCCAGAAAATGGACTAGAGGTGAAAGTATCAGGCTCGGGGGCAACTGGGAGCTACCCTACAACTTTGTCACCCTCAATGTTGATGATTGACTGGAGATGTGATATTGCTAGAGACATTCCATATGAAGTTAACGTCACAATCCCTGTGGCTGATTATGACCCAATTAGTTTTTTTCTTACCAAAATGTGTGAAAAAAGGCAGGACGTACTAGGGGATTCTATGAAAGGATGGGCCACATTTGGAATACTCTCTTGCATATTCATAGTCGTAGCATCGCTATTTTGCTGTGGAGGATTTGTTTATAAGGCCCGAGTGCAAGGGCAGCGTGGAATTGATGCATTGCCGGGCATGACACTACTTTCCGCGTGCTTGGAAACTGTGAGTGGTGCAGGACAGAGCTACCCGAGAGCTGAAGGCATTAATAGTGGGTTCGTCAGTGAAGCCTCCTGGGATCGCCCACCATCCTCTTCCTCTTCTCGACGGACATGGACACCAACTGAGAAAAATTACGGTTCAATATGA 3051 42.81 MSSQLHTVENPRKWRFTWEAQSHIPTLRLLLFDSYTNPSLQCQNLKVHLNLQESVVSVAWFQDLDMSIRVPMPPVLVDAESPLSFRAFEDHIEVKLVLLLPVDHPIILNFDNVLDFSQERGNSHSKASKPLSMDSDQISLSRSGGVHFYCRNCSFRLSKSPLRDFVEMPSVNWREVADNWFGSCCCSFGGISEELVTRYTNSYRCAKGVCLLTLTTITLSKDDLVGRVFSDYDGTREFKDESDLNDGNSLTEAKQKSPCNHTSVEKVESKQLNYNNLVANMKVNAAEKGSDEVDSPVVTPIPDCCHHEESNVLHHLDRDCMHHTCGTYNLDPKPVNSVDISDDQRSFLNGFLGNIFMARLSNLSADFEWAEFFCPQCSTLIGAYPCRNGCGPTDGGVRLFKCYVSTCLTAESGNLLRSAYCYVMPFFDAVSDFEIFYISLSAQGSLTYAHREYTLERMFANQLLESANEESSFRTVVKELKTKSPMLHIVLINSNSWSCSGYCLGMEGTAEFVPKVELNPIIKVLFSDCNKSAESHLRKLEEWVTKDIADEVFMLAHQIEELVEILVSRNDTLPSSCSSLDGLTLTSILSSRNPALRFSREQQNGAIHFKVSGVLLLTVEVNAIAVPSSSCYAFDNSSHIVDFGYVDFGRFDKFNYFVSGSGHANFVQGYYYGDLTSCEQSYDKLGRTALVNVICGSCLNGQCKGGLGCICNITYESTCSCTTSPVLCSLNSRNMDWGLIGLIEKILNNITFCVSIVVLIKFKPVIVDLAIPCATQGPRVFKGFTVGFHPRSWEIVYNGLTQLGYEKPHHAFSFSTEQTGVVLYMTAIASLSSLVQKPIIQVFPENGLEVKVSGSGATGSYPTTLSPSMLMIDWRCDIARDIPYEVNVTIPVADYDPISFFLTKMCEKRQDVLGDSMKGWATFGILSCIFIVVASLFCCGGFVYKARVQGQRGIDALPGMTLLSACLETVSGAGQSYPRAEGINSGFVSEASWDRPPSSSSSRRTWTPTEKNYGSI 1016
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 34096760 34108157 + ClCG01G019940.1 Cla01g01942 265531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g01942 1016 Pfam HECT-like Ubiquitin-conjugating enzyme (E2)-binding 130 578 IPR019193 -
Cla01g01942 1016 MobiDBLite consensus disorder prediction 988 1016 - -
Cla01g01942 1016 MobiDBLite consensus disorder prediction 991 1016 - -
Cla01g01942 1016 PANTHER G-PROTEIN COUPLED RECEPTOR 644 722 - -
Cla01g01942 1016 PANTHER G-PROTEIN COUPLED RECEPTOR 758 1016 - -
Cla01g01942 1016 MobiDBLite consensus disorder prediction 248 262 - -
Cla01g01942 1016 MobiDBLite consensus disorder prediction 240 262 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla01g01942 Cla07g00825 CCT
Cla01g01942 Cla07g00825 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g01942 - - csv:101204887 1019.61