Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla01g01943 | ATGGCCAAGCTTGTGAGCTTTGTTTTTGTTCTTTCCCTTCTTGCCTTTGCTCCACTCTGTTTCTGTGGCAGAAATAATGGTGGCTTTGGGTCTCTGTACCCTCAATATTATGACCATTCATGCCCCAAAGCTAAGGAAATAGTGAAATCCATTGTGGCAAAGGCTTTTGCCAGAGAAGCTCGTATTGCTGCTTCCATCCTTAGACTTCATTTCCATGATTGTTTTGTTCAGGGGTGTGATGCATCTCTACTGTTGGATAGCAGTGGAAGCATTAGGAGCGAAAAAAATTCAAACCCAAATAAGAACTCAGCTAGAGGATTTGAAGTGATTGATGAAATCAAATCTGCATTGGAGAAAGAGTGCCCACAAACTGTTTCTTGTGCTGATATCTTGGCTTTGGCTGCAAGAGATTCGACTGTCATTACGGGTGGACCATCTTGGGAGGTTCCATTGGGAAGGAAGGACTCAAGAACTGCGAGTTTGAGTGGCTCCAACAACAACATTCCAGCTCCAAACAATACTTTCCAAACCATTCTCAATAGATTCCAAAACCAAGGGCTTGACATTGTTGATCTTGTTGCCTTATCTGGAAGCCACACCATCGGAAATTCAAGGTGCACCAGCTTCAGGCAAAGGCTATACAACCAAAACGGCAACGGACAACCCGACAAAACCCTTCCGCAGTCGTTCGCGGCGGGGCTCCGTAACCGCTGCCCCAGATCCGGCGGTGACAATAACCTCTTTTTCCTCGACTACGTCAGCCCGACCAAATTCGACAACAGCTACTTCAAGAACTTAGTTGGTTTCAAAGGGCTTCTGAACTCCGACCAAGTTCTCCTCACCGAAAACGATGCGTCGGCCGCTTTGGTAAAGAAATATGCCGACAACAGCGAGCTGTTCTTCGAGCAATTCGCCAAATCTATGATCAAAATGGGTAATATTTCCCCATTGACGGGCTCAAATGGAGAAATTAGAAAGACTTGCAGGAAGATCAACAGTTAA | 1002 | 45.61 | MAKLVSFVFVLSLLAFAPLCFCGRNNGGFGSLYPQYYDHSCPKAKEIVKSIVAKAFAREARIAASILRLHFHDCFVQGCDASLLLDSSGSIRSEKNSNPNKNSARGFEVIDEIKSALEKECPQTVSCADILALAARDSTVITGGPSWEVPLGRKDSRTASLSGSNNNIPAPNNTFQTILNRFQNQGLDIVDLVALSGSHTIGNSRCTSFRQRLYNQNGNGQPDKTLPQSFAAGLRNRCPRSGGDNNLFFLDYVSPTKFDNSYFKNLVGFKGLLNSDQVLLTENDASAALVKKYADNSELFFEQFAKSMIKMGNISPLTGSNGEIRKTCRKINS | 333 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 34110056 | 34112700 | + | ClCG01G019950.1 | Cla01g01943 | 265532 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla01g01943 | 333 | CDD | secretory_peroxidase | 32 | 331 | IPR033905 | GO:0004601|GO:0042744 | |
Cla01g01943 | 333 | PRINTS | Plant peroxidase signature | 41 | 60 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01943 | 333 | PRINTS | Plant peroxidase signature | 65 | 85 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01943 | 333 | PRINTS | Plant peroxidase signature | 105 | 118 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01943 | 333 | PRINTS | Plant peroxidase signature | 124 | 134 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01943 | 333 | PRINTS | Plant peroxidase signature | 143 | 158 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01943 | 333 | PRINTS | Plant peroxidase signature | 190 | 202 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01943 | 333 | PRINTS | Plant peroxidase signature | 249 | 264 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01943 | 333 | PRINTS | Plant peroxidase signature | 265 | 282 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01943 | 333 | PRINTS | Plant peroxidase signature | 306 | 319 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01943 | 333 | ProSiteProfiles | Plant heme peroxidase family profile. | 31 | 332 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01943 | 333 | Gene3D | - | 36 | 332 | - | - | |
Cla01g01943 | 333 | PANTHER | PEROXIDASE | 5 | 332 | - | - | |
Cla01g01943 | 333 | PANTHER | PEROXIDASE 72-RELATED | 5 | 332 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01943 | 333 | ProSitePatterns | Peroxidases active site signature. | 63 | 74 | IPR019794 | GO:0004601 | |
Cla01g01943 | 333 | SUPERFAMILY | Heme-dependent peroxidases | 32 | 332 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01943 | 333 | Gene3D | Peroxidase, domain 2 | 169 | 312 | - | - | |
Cla01g01943 | 333 | Pfam | Peroxidase | 48 | 296 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01943 | 333 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 191 | 201 | IPR019793 | - | |
Cla01g01943 | 333 | PRINTS | Haem peroxidase superfamily signature | 63 | 77 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01943 | 333 | PRINTS | Haem peroxidase superfamily signature | 125 | 142 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01943 | 333 | PRINTS | Haem peroxidase superfamily signature | 143 | 155 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01943 | 333 | PRINTS | Haem peroxidase superfamily signature | 191 | 206 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla01g01943 | 333 | PRINTS | Haem peroxidase superfamily signature | 251 | 266 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cla01g01943 | Cla07g00832 | CCT | |
Cla01g01943 | Cla07g00832 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g01943 | Cla-Chr1:34110056 | Cla09g01169 | Cla-Chr9:13907680 | 3.63E-105 | dispersed | |
Cla06g00418 | Cla-Chr6:5086645 | Cla01g01943 | Cla-Chr1:34110056 | 3.29E-99 | dispersed | |
Cla07g01656 | Cla-Chr7:33833439 | Cla01g01943 | Cla-Chr1:34110056 | 1.14E-89 | dispersed | |
Cla10g01940 | Cla-Chr10:35241311 | Cla01g01943 | Cla-Chr1:34110056 | 3.85E-70 | dispersed | |
Cla01g00472 | Cla-Chr1:5069003 | Cla01g01943 | Cla-Chr1:34110056 | 4.31E-95 | transposed | |
Cla03g00023 | Cla-Chr3:273791 | Cla01g01943 | Cla-Chr1:34110056 | 1.04E-103 | transposed | |
Cla05g02360 | Cla-Chr5:35184436 | Cla01g01943 | Cla-Chr1:34110056 | 1.02E-96 | transposed | |
Cla11g00557 | Cla-Chr11:6305572 | Cla01g01943 | Cla-Chr1:34110056 | 1.20E-109 | transposed | |
Cla01g01943 | Cla-Chr1:34110056 | Cla07g00832 | Cla-Chr7:23049341 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla01g01943 | K00430 | - | csv:101204648 | 606.29 |