Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla01g01946 | ATGGAATGGGTTTTGGGATTTTGGGTTTGGCTTGTGAGTGTTATTTTAGGTTGGTTTTGGTTGAAGAAGAAGCATATTGGAAACAAAGATGGGATTCCTAAAGGGAATTTGGGTTGGCCTTTCTTTGGTGAAACTCTTCAATTCATTTCGTCTGGCTATTCTTCTCGTCCTGTCACCTTCATGGACAAACGCAAATCTCTGTATGGGAATGTGTTTAAAACCAACATTTTGGGGACACCCATTATAGTATCAACTGATTCAGAGGTGAATAAGGTTGTTTTACAAAACCATGGGAATATATTTATCCCAGCTTACCCAAAATCAATAACAGAATTACTTGGTACATTTTCAATTCTAAGAATGAATGGGAATGTTCAAAAAAGAGTTCATACAATAATTGGAGCCTTCCTAAGATCCCCTCAACTCAAAGCCCAAATCACACAAGATATTCAAAACACTGTTAAACTTCGACTTGCCAATTGGAATTCCTCTCAATTGGTTTATCTCCAAACTGAAACCAAACAGATCACATTTGAAGTATTGGTGAAGGTGTTGATGAGTGTGGGACCTGGCGAAGAATTGAAGATTTTGAAAAGGGAATTTGAAGAGTTTATCAAAGCTTTGATTTGTATACCCATTAAATTACCCGGAACTAGGCTATATAAATCTTTGAAGGCCAGAGAGAAGCTGTTGAAAATTGTGAGTAAGATTGTGGAAGATCGAAAGTCGAGGGTGGAGGAGAAGGTTGCACCGAGAGATGCGGTGGACGTGCTCTTACAGGATCACGATGAGATTCAAGGGCTACCGTTGGATTTCATCAGCAGTCACATCATAGAGTTGATGATTCCCGGCGAGGAGACGGTGCCGATGGCCATGACCCTCGCCGTCAAGTTTCTCAGTGATTGCCCCCGCGCTCTTGCCCAATTAATGGAAGAGAATATGAAACTGAAGAAGCAGAAGGATGGCTCTGGGGAGGAGTATACGTGGACAGATTACATGTCTCTACTATTTACTCAAAATGTGATCAGTGAAACATTAAGAATGGCCAATATCATCAATGGGGTTTGGAGAAAAGCTCAAAAAGATGTGCAAATCAAAGGCTATTTAATACCACAAGGATGGTGTGTCTTGGCGTCTTTTATTTCAGTTCATATGGACGAGAAGAACTACGCAAACCCACATCAGTTTGATCCATGGAGATGGGAGGAAAATTTGTCTGCAACAAACAACCACAACTTTACACCTTTTGGAGGGGGACAGAGGCTATGTCCTGGCATCGAACTCGCCAGGCTCGAAATCTCGATTTTCCTTCATCATCTCGTCACTACCTACAAATGGGGAGCTGAGAAGGATGAAATCATCCATTTTCCGACAGTGAGGATGAGAAGGAAGCTGCCTATCACAATCACAACCTTAAGCTCTTGA | 1425 | 41.54 | MEWVLGFWVWLVSVILGWFWLKKKHIGNKDGIPKGNLGWPFFGETLQFISSGYSSRPVTFMDKRKSLYGNVFKTNILGTPIIVSTDSEVNKVVLQNHGNIFIPAYPKSITELLGTFSILRMNGNVQKRVHTIIGAFLRSPQLKAQITQDIQNTVKLRLANWNSSQLVYLQTETKQITFEVLVKVLMSVGPGEELKILKREFEEFIKALICIPIKLPGTRLYKSLKAREKLLKIVSKIVEDRKSRVEEKVAPRDAVDVLLQDHDEIQGLPLDFISSHIIELMIPGEETVPMAMTLAVKFLSDCPRALAQLMEENMKLKKQKDGSGEEYTWTDYMSLLFTQNVISETLRMANIINGVWRKAQKDVQIKGYLIPQGWCVLASFISVHMDEKNYANPHQFDPWRWEENLSATNNHNFTPFGGGQRLCPGIELARLEISIFLHHLVTTYKWGAEKDEIIHFPTVRMRRKLPITITTLSS | 474 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 34126032 | 34131197 | + | ClCG01G019980.1 | Cla01g01946 | 265535 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla01g01946 | 474 | Pfam | Cytochrome P450 | 33 | 451 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla01g01946 | 474 | Gene3D | Cytochrome P450 | 22 | 473 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla01g01946 | 474 | PRINTS | E-class P450 group I signature | 65 | 84 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla01g01946 | 474 | PRINTS | E-class P450 group I signature | 272 | 289 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla01g01946 | 474 | PRINTS | E-class P450 group I signature | 379 | 403 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla01g01946 | 474 | PRINTS | E-class P450 group I signature | 413 | 423 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla01g01946 | 474 | PRINTS | E-class P450 group I signature | 423 | 446 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla01g01946 | 474 | PRINTS | P450 superfamily signature | 138 | 151 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla01g01946 | 474 | PRINTS | P450 superfamily signature | 340 | 351 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla01g01946 | 474 | PRINTS | P450 superfamily signature | 414 | 423 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla01g01946 | 474 | PRINTS | P450 superfamily signature | 423 | 434 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla01g01946 | 474 | PANTHER | CYTOCHROME P450 26 | 12 | 469 | - | - | |
Cla01g01946 | 474 | SUPERFAMILY | Cytochrome P450 | 32 | 469 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla01g01946 | 474 | PANTHER | 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90C1 | 12 | 469 | - | - | |
Cla01g01946 | 474 | Coils | Coil | 306 | 326 | - | - | |
Cla01g01946 | 474 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 416 | 425 | IPR017972 | GO:0005506|GO:0016705 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g01946 | Cla-Chr1:34126032 | Cla07g01299 | Cla-Chr7:30128051 | 4.37E-178 | dispersed | |
Cla01g01946 | Cla-Chr1:34126032 | Cla09g00055 | Cla-Chr9:546635 | 1.63E-173 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla01g01946 | K12637 | - | csv:101203911 | 850.121 |