Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g01946 ATGGAATGGGTTTTGGGATTTTGGGTTTGGCTTGTGAGTGTTATTTTAGGTTGGTTTTGGTTGAAGAAGAAGCATATTGGAAACAAAGATGGGATTCCTAAAGGGAATTTGGGTTGGCCTTTCTTTGGTGAAACTCTTCAATTCATTTCGTCTGGCTATTCTTCTCGTCCTGTCACCTTCATGGACAAACGCAAATCTCTGTATGGGAATGTGTTTAAAACCAACATTTTGGGGACACCCATTATAGTATCAACTGATTCAGAGGTGAATAAGGTTGTTTTACAAAACCATGGGAATATATTTATCCCAGCTTACCCAAAATCAATAACAGAATTACTTGGTACATTTTCAATTCTAAGAATGAATGGGAATGTTCAAAAAAGAGTTCATACAATAATTGGAGCCTTCCTAAGATCCCCTCAACTCAAAGCCCAAATCACACAAGATATTCAAAACACTGTTAAACTTCGACTTGCCAATTGGAATTCCTCTCAATTGGTTTATCTCCAAACTGAAACCAAACAGATCACATTTGAAGTATTGGTGAAGGTGTTGATGAGTGTGGGACCTGGCGAAGAATTGAAGATTTTGAAAAGGGAATTTGAAGAGTTTATCAAAGCTTTGATTTGTATACCCATTAAATTACCCGGAACTAGGCTATATAAATCTTTGAAGGCCAGAGAGAAGCTGTTGAAAATTGTGAGTAAGATTGTGGAAGATCGAAAGTCGAGGGTGGAGGAGAAGGTTGCACCGAGAGATGCGGTGGACGTGCTCTTACAGGATCACGATGAGATTCAAGGGCTACCGTTGGATTTCATCAGCAGTCACATCATAGAGTTGATGATTCCCGGCGAGGAGACGGTGCCGATGGCCATGACCCTCGCCGTCAAGTTTCTCAGTGATTGCCCCCGCGCTCTTGCCCAATTAATGGAAGAGAATATGAAACTGAAGAAGCAGAAGGATGGCTCTGGGGAGGAGTATACGTGGACAGATTACATGTCTCTACTATTTACTCAAAATGTGATCAGTGAAACATTAAGAATGGCCAATATCATCAATGGGGTTTGGAGAAAAGCTCAAAAAGATGTGCAAATCAAAGGCTATTTAATACCACAAGGATGGTGTGTCTTGGCGTCTTTTATTTCAGTTCATATGGACGAGAAGAACTACGCAAACCCACATCAGTTTGATCCATGGAGATGGGAGGAAAATTTGTCTGCAACAAACAACCACAACTTTACACCTTTTGGAGGGGGACAGAGGCTATGTCCTGGCATCGAACTCGCCAGGCTCGAAATCTCGATTTTCCTTCATCATCTCGTCACTACCTACAAATGGGGAGCTGAGAAGGATGAAATCATCCATTTTCCGACAGTGAGGATGAGAAGGAAGCTGCCTATCACAATCACAACCTTAAGCTCTTGA 1425 41.54 MEWVLGFWVWLVSVILGWFWLKKKHIGNKDGIPKGNLGWPFFGETLQFISSGYSSRPVTFMDKRKSLYGNVFKTNILGTPIIVSTDSEVNKVVLQNHGNIFIPAYPKSITELLGTFSILRMNGNVQKRVHTIIGAFLRSPQLKAQITQDIQNTVKLRLANWNSSQLVYLQTETKQITFEVLVKVLMSVGPGEELKILKREFEEFIKALICIPIKLPGTRLYKSLKAREKLLKIVSKIVEDRKSRVEEKVAPRDAVDVLLQDHDEIQGLPLDFISSHIIELMIPGEETVPMAMTLAVKFLSDCPRALAQLMEENMKLKKQKDGSGEEYTWTDYMSLLFTQNVISETLRMANIINGVWRKAQKDVQIKGYLIPQGWCVLASFISVHMDEKNYANPHQFDPWRWEENLSATNNHNFTPFGGGQRLCPGIELARLEISIFLHHLVTTYKWGAEKDEIIHFPTVRMRRKLPITITTLSS 474
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 34126032 34131197 + ClCG01G019980.1 Cla01g01946 265535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g01946 474 Pfam Cytochrome P450 33 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01946 474 Gene3D Cytochrome P450 22 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01946 474 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01946 474 PRINTS E-class P450 group I signature 272 289 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01946 474 PRINTS E-class P450 group I signature 379 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01946 474 PRINTS E-class P450 group I signature 413 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01946 474 PRINTS E-class P450 group I signature 423 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01946 474 PRINTS P450 superfamily signature 138 151 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01946 474 PRINTS P450 superfamily signature 340 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01946 474 PRINTS P450 superfamily signature 414 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01946 474 PRINTS P450 superfamily signature 423 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01946 474 PANTHER CYTOCHROME P450 26 12 469 - -
Cla01g01946 474 SUPERFAMILY Cytochrome P450 32 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g01946 474 PANTHER 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90C1 12 469 - -
Cla01g01946 474 Coils Coil 306 326 - -
Cla01g01946 474 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 416 425 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01946 Cla-Chr1:34126032 Cla07g01299 Cla-Chr7:30128051 4.37E-178 dispersed
Cla01g01946 Cla-Chr1:34126032 Cla09g00055 Cla-Chr9:546635 1.63E-173 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g01946 K12637 - csv:101203911 850.121