Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g01980 ATGATCAAGATTGGTTGGGGAGCGGGGCATCCTCGTGGTCGTGGCTCGTGGAGTGCACGATCTGGTGTTGGATTTTGTGGTATCGTTTCATATTATAGTGGAGATTGCCTTCTACCCTTTCGTTTTCCAGATTTCCCTCTCTCTTTTGGAAGGGATCAGAGGAATTCAACCCTGAGATTTACTCGCCGTTTTGCTCTGTTTAAATACCCTTTTGGGATCCTTATGGAACAGTGGAAGACGGGAGATTTCACTCAATCTATTGTACCAGCTGATTTAGTTCCTTCTTCGTCTCTTCAACCTCAGCCTGTCGCTGTGTCGTCCACTCGCCACCATAACAACCAGCTAACTGAATCCAGGTTAAGAGCAGATGCAGAAGTAAAAGATCCAATAGCAGTGAGAAAAATTCAAAAGGCAGATCGTGAAAAGTTGAGGAGAGACAGACTGAATGAACACTTTCTTGAGCTAGGAAACACATTAGATCCAGATAGGCCTAAAAATGACAAGGCTACCATCCTTACAGACACTATCCAAATGCTGAAGGATTTAACTGCCGAAGTCAATAGATTAAAGGCTGACTATGAAACTCTTTCTGAAGAATCACGTGAGCTAACTCAGGAAAAGAATGAGCTTAGAGAAGAGAAGGCTTCATTAAAGTCAGATATTGAAAATCTAAATGCTCAGTATCAGCAAAGATTGAGGGTCATGTTTCCCTGGGCCACAATGGATCCTTCAGTTGTCATGGGGCCCCCATATTCCTACCCCGTTCCCGTTCCCGTTCCCCCTGGACCGATTCCCATGCATCCGTCATTGCAGCCCTTCACCTTCTTTGGAAATCAGAATCCTGGTGCCATTCCCAACCCCTGTTCCACATTTGTCCCATATACTGCTGCTGCCAATCATCCGATCGATCAGCCCTCTGCCCATTATGCTTCCAATTCACATGTATCTAGCAAACAAGATTCCAGAAGTAAATCATCAGATCAGCACAGGCGTAGTAATGCGGAAAGATGCGACGAGTCCAACGATGTAGCAACAGACCTTGAACTTAAGATGCCTGGATCTTCTACACAGCAGGATGCATCCTCTGGAAGTAAGAAAGGTAAGCAGTCACAAAGTAAAGAAAAAAGTGTTACAGACTGCAGTTCTTCGAGTAGGTTTTCTTCATCCCAAGTTCTTCAAGATAGCTCCTCTAACAGTGTTGGCGACATCCCGAAACAGAACAACTGA 1227 44.82 MIKIGWGAGHPRGRGSWSARSGVGFCGIVSYYSGDCLLPFRFPDFPLSFGRDQRNSTLRFTRRFALFKYPFGILMEQWKTGDFTQSIVPADLVPSSSLQPQPVAVSSTRHHNNQLTESRLRADAEVKDPIAVRKIQKADREKLRRDRLNEHFLELGNTLDPDRPKNDKATILTDTIQMLKDLTAEVNRLKADYETLSEESRELTQEKNELREEKASLKSDIENLNAQYQQRLRVMFPWATMDPSVVMGPPYSYPVPVPVPPGPIPMHPSLQPFTFFGNQNPGAIPNPCSTFVPYTAAANHPIDQPSAHYASNSHVSSKQDSRSKSSDQHRRSNAERCDESNDVATDLELKMPGSSTQQDASSGSKKGKQSQSKEKSVTDCSSSSRFSSSQVLQDSSSNSVGDIPKQNN 408
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 34450499 34453773 - ClCG01G020320.1 Cla01g01980 265569

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g01980 408 MobiDBLite consensus disorder prediction 320 345 - -
Cla01g01980 408 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 132 182 IPR011598 GO:0046983
Cla01g01980 408 CDD bHLH_AtILR3_like 137 211 - -
Cla01g01980 408 PANTHER TRANSCRIPTION FACTOR BHLH121 107 407 IPR044579 GO:0003700|GO:0055072
Cla01g01980 408 MobiDBLite consensus disorder prediction 374 408 - -
Cla01g01980 408 Coils Coil 172 227 - -
Cla01g01980 408 Gene3D - 131 234 IPR036638 GO:0046983
Cla01g01980 408 PANTHER TRANSCRIPTION FACTOR BHLH11 107 407 - -
Cla01g01980 408 SMART finulus 138 188 IPR011598 GO:0046983
Cla01g01980 408 MobiDBLite consensus disorder prediction 305 319 - -
Cla01g01980 408 MobiDBLite consensus disorder prediction 350 367 - -
Cla01g01980 408 Pfam Helix-loop-helix DNA-binding domain 133 182 IPR011598 GO:0046983
Cla01g01980 408 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 133 202 IPR036638 GO:0046983
Cla01g01980 408 MobiDBLite consensus disorder prediction 302 408 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g01980 - - - csv:101222613 548.51
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01980 Cla-Chr1:34450499 Cla02g01113 Cla-Chr2:23899468 1.94E-89 dispersed
Cla01g01980 Cla-Chr1:34450499 Cla05g01539 Cla-Chr5:25681619 7.70E-19 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g1114 Blo04g00884 . . . . . . . . . Cma03g00685 Cma07g00427 Car03g00631 Car07g00374 Sed14g1197 Cpe19g00860 Cpe10g00664 Bhi03g00866 Tan03g2084 Cmetu04g0958 . Hepe04g1592 . . Cla01g01980 Cam01g2074 Cec04g1733 Cco04g1798 Clacu01g2095 Cmu01g1971 Cre04g1646 Cone8ag0851 Cone12ag0715 . . Lsi01g00601 . . Cme08g00928 . . . . . . Bma03g00960 . Sed01g0221 Cmo03g00709 Cmo07g00424 . . . . . . Bhi10g01891 Tan05g1191 Cmetu11g1417 . Hepe08g0945 . . . . . . . . . . Csa06g03326 Chy02g00573 .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cla10g00537 . 90 289 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 55.4 4.8e-53 204.9
Cla02g00814 . 12 269 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 52.1 2.1e-40 162.9
Cla10g01302 . 7 233 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G41130 58.0 1.7e-59 226.5
Cla10g00559 . 322 451 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 70.8 2.8e-45 179.9
Cla05g01333 . 41 511 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 56.6 8.7e-118 421.0
Cla03g00378 . 775 1251 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 50.6 9.4e-104 374.4
Cla02g01113 . 108 341 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 54.4 2.1e-51 199.9
Cla01g01980 . 120 368 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 59.5 1.1e-47 187.6
Cla07g01594 . 119 358 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G43140 57.3 5.1e-58 221.9
Cla05g00088 . 17 613 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G01260 51.7 1.2e-153 540.4
Cla03g00376 CCT 161 282 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50915 65.9 8.3e-41 164.5
Cla10g00998 . 201 358 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G43175 55.0 7.9e-37 151.0
Cla06g00420 . 38 191 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 59.4 3.4e-43 172.2
Cla05g00714 . 41 197 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 54.8 1.9e-38 156.4
Cla06g00420 . 36 194 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 60.1 5.4e-46 181.4
Cla05g00714 . 39 200 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 52.3 8.4e-39 157.5
Cla07g01443 . 23 167 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05710 58.6 1.6e-42 169.5
Cla07g01443 . 21 154 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 65.7 2.8e-41 165.2
Cla01g01656 . 127 254 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 77.3 6.1e-42 168.7
Cla02g00729 . 163 334 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 59.2 9.5e-47 184.5
Cla02g02106 . 9 302 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G28160 51.0 7.1e-60 228.0
Cla05g02332 . 60 359 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 57.8 9.9e-77 284.3
Cla06g00960 . 16 313 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 52.8 4.0e-70 262.3
Cla10g01302 . 62 233 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 51.6 1.3e-39 161.0
Cla08g00911 . 1 256 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 51.6 5.4e-53 205.3
Cla06g01360 . 2 216 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 56.9 7.8e-53 204.1
Cla11g01141 . 1 214 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 51.6 9.9e-48 187.2
Cla05g02049 CCT,ECH 81 260 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 58.5 2.2e-45 179.5
Cla02g01248 . 47 165 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 72.3 1.3e-42 170.2
Cla08g01577 CCT,ECH 102 209 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 73.1 2.0e-38 156.4
Cla01g01522 . 113 212 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00120 76.0 1.2e-36 150.2
Cla01g01522 . 118 214 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09750 88.7 1.1e-41 167.2
Cla06g01463 CCT,ECH 97 230 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G18400 71.6 5.6e-44 174.9
Cla04g01092 CCT,ECH 109 240 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G18400 68.1 6.2e-43 171.4
Cla05g00577 . 1 184 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06120 64.9 2.4e-56 215.7
Cla05g02655 . 207 378 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 53.3 3.5e-45 179.9
Cla09g01129 CCT 69 675 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G46760 53.6 1.6e-148 523.5
Cla10g00159 CCT 104 684 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G46760 53.3 1.2e-145 513.8
Cla06g01463 CCT,ECH 5 257 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 50.4 3.1e-48 189.1
Cla04g01092 CCT,ECH 101 250 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 66.9 8.3e-46 181.0
Cla08g00517 . 110 248 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 61.9 1.7e-38 156.8
Cla05g02102 CCT,ECH 243 336 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27740 81.9 1.4e-37 153.7
Cla02g00509 . 257 354 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36540 77.6 8.8e-39 157.9
Cla09g00695 . 72 312 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 79.6 1.1e-95 346.7
Cla03g01576 . 134 317 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 74.6 4.9e-64 241.5
Cla06g01221 . 159 365 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 55.6 5.1e-45 178.3
Cla09g01129 CCT 1 675 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 54.6 1.5e-173 606.7
Cla10g00159 CCT 39 684 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 54.4 1.3e-166 583.6
Cla11g01450 CCT 153 331 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 65.0 8.8e-58 221.1
Cla01g01776 . 140 357 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 55.0 6.3e-56 214.9
Cla08g01184 CCT 163 337 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 65.0 9.1e-55 211.1
Cla02g00509 . 263 357 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 85.3 1.5e-39 161.0
Cla01g00715 . 335 431 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 82.5 1.3e-38 157.9
Cla05g02367 . 362 458 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 81.4 3.7e-38 156.4
Cla02g00509 . 250 447 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 51.9 1.1e-42 171.0
Cla11g00412 . 137 242 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 73.6 2.8e-38 156.4
Cla05g00770 . 338 458 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 68.3 3.7e-38 156.0
Cla05g02367 . 363 532 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 50.6 4.1e-37 152.5
Cla01g00715 . 336 428 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 79.6 5.3e-37 152.1
Cla02g00509 . 244 352 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G18300 79.1 2.8e-39 159.8
Cla06g01221 . 206 421 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 66.0 9.0e-66 247.3
Cla02g01677 . 281 448 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 68.6 4.1e-50 195.3
Cla03g01576 . 146 308 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 62.0 1.8e-45 179.9
Cla09g00695 . 137 313 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 58.2 1.6e-43 173.3
Cla06g01221 . 208 422 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 61.2 2.9e-57 219.5
Cla02g01677 . 281 463 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 61.2 6.3e-44 175.3
Cla09g00695 . 148 311 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 59.8 6.9e-43 171.8
Cla03g01576 . 153 298 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 63.7 1.5e-42 170.6
Cla09g00695 . 1 313 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G03040 59.4 8.3e-91 330.9
Cla03g01576 . 134 317 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G03040 65.0 4.9e-59 225.3
Cla06g01221 . 204 365 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G03040 57.5 8.4e-43 171.4
Cla05g02367 . 352 537 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 55.9 6.4e-44 175.3
Cla01g00715 . 326 432 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 78.5 2.3e-41 166.8
Cla06g01463 CCT,ECH 132 249 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G25330 65.5 2.1e-37 152.9
Cla08g00517 . 116 250 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G25330 63.0 7.9e-37 151.0
Cla01g00715 . 326 510 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 53.8 4.4e-40 162.5
Cla05g02367 . 346 538 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 51.3 1.7e-39 160.6
Cla02g00509 . 250 385 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 64.5 4.1e-38 156.0
Cla05g02655 . 215 375 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 55.3 1.7e-36 150.6
Cla02g00509 . 252 357 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G48560 75.7 6.7e-38 155.6
Cla01g00715 . 322 483 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G48560 53.9 1.1e-37 154.8
Cla05g02367 . 357 456 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G48560 78.2 1.1e-37 154.8
Cla08g00027 . 22 202 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G35460 55.2 1.1e-49 193.7
Cla08g00027 . 22 240 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09180 60.3 1.9e-66 249.6
Cla06g01221 . 172 378 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 65.4 7.5e-59 224.6
Cla03g01576 . 142 298 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 60.2 6.8e-44 174.9
Cla02g01677 . 281 423 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 68.7 2.0e-43 173.3
Cla09g00695 . 130 307 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 54.0 5.8e-43 171.8
Cla03g00820 . 139 287 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G66470 67.5 1.3e-42 170.6
Cla10g00998 . 240 355 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G14760 67.6 5.8e-39 158.7
Cla02g00679 . 196 307 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G14760 71.9 5.8e-39 158.7
Cla10g00998 . 266 352 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 93.1 4.6e-39 159.1
Cla02g00679 . 223 307 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 94.1 1.7e-38 157.1
Cla05g02102 CCT,ECH 245 328 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 94.0 3.0e-38 156.4
Cla08g01617 CCT,ECH 236 321 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 87.2 5.6e-37 152.1
Cla03g00820 . 104 289 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G37800 57.2 2.7e-43 172.9
Cla09g00040 . 126 396 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 51.3 9.7e-64 241.1
Cla05g02049 CCT,ECH 86 256 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 59.3 2.0e-43 172.9
Cla02g01248 . 71 165 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 87.4 9.3e-41 164.1
Cla08g01577 CCT,ECH 118 209 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 85.9 7.3e-38 154.5
Cla09g01111 . 84 277 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G22490 54.3 1.1e-42 171.0
Cla08g01134 . 2 281 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 51.3 1.6e-51 200.3
Cla02g01570 . 107 285 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 54.1 2.2e-45 179.9
Cla09g01111 . 85 277 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 51.3 6.9e-39 158.3
Cla05g00351 . 64 377 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G24140 61.5 9.1e-92 334.3
Cla09g01129 CCT 69 675 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G46760 53.6 1.6e-148 523.5
Cla10g00159 CCT 104 684 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G46760 53.3 1.2e-145 513.8
Cla09g01129 CCT 1 675 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 54.6 1.5e-173 606.7
Cla10g00159 CCT 39 684 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 54.4 1.3e-166 583.6
Cla09g00695 . 1 313 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G03040 59.4 8.3e-91 330.9
Cla03g01576 . 134 317 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G03040 65.0 4.9e-59 225.3
Cla06g01221 . 204 365 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G03040 57.5 8.4e-43 171.4
Cla05g00088 . 17 613 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G01260 51.7 1.2e-153 540.4
Cla01g01656 . 127 254 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 77.3 6.1e-42 168.7
Cla02g00729 . 163 334 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 59.2 9.5e-47 184.5
Cla02g02106 . 9 302 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G28160 51.0 7.1e-60 228.0
Cla05g02332 . 60 359 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 57.8 9.9e-77 284.3
Cla06g00960 . 16 313 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 52.8 4.0e-70 262.3
Cla10g01302 . 62 233 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 51.6 1.3e-39 161.0
Cla08g00911 . 1 256 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 51.6 5.4e-53 205.3
Cla06g01360 . 2 216 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 56.9 7.8e-53 204.1
Cla11g01141 . 1 214 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 51.6 9.9e-48 187.2
Cla05g02049 CCT,ECH 81 260 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 58.5 2.2e-45 179.5
Cla02g01248 . 47 165 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 72.3 1.3e-42 170.2
Cla08g01577 CCT,ECH 102 209 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 73.1 2.0e-38 156.4
Cla01g01522 . 113 212 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00120 76.0 1.2e-36 150.2
Cla01g01522 . 118 214 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09750 88.7 1.1e-41 167.2
Cla06g01463 CCT,ECH 97 230 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G18400 71.6 5.6e-44 174.9
Cla04g01092 CCT,ECH 109 240 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G18400 68.1 6.2e-43 171.4
Cla05g00577 . 1 184 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06120 64.9 2.4e-56 215.7
Cla05g02655 . 207 378 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 53.3 3.5e-45 179.9
Cla06g01463 CCT,ECH 5 257 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 50.4 3.1e-48 189.1
Cla04g01092 CCT,ECH 101 250 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 66.9 8.3e-46 181.0
Cla08g00517 . 110 248 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 61.9 1.7e-38 156.8
Cla05g02102 CCT,ECH 243 336 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27740 81.9 1.4e-37 153.7
Cla02g00509 . 257 354 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36540 77.6 8.8e-39 157.9
Cla09g00695 . 72 312 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 79.6 1.1e-95 346.7
Cla03g01576 . 134 317 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 74.6 4.9e-64 241.5
Cla06g01221 . 159 365 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 55.6 5.1e-45 178.3
Cla11g01450 CCT 153 331 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 65.0 8.8e-58 221.1
Cla01g01776 . 140 357 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 55.0 6.3e-56 214.9
Cla08g01184 CCT 163 337 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 65.0 9.1e-55 211.1
Cla02g00509 . 263 357 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 85.3 1.5e-39 161.0
Cla01g00715 . 335 431 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 82.5 1.3e-38 157.9
Cla05g02367 . 362 458 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 81.4 3.7e-38 156.4
Cla02g00509 . 250 447 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 51.9 1.1e-42 171.0
Cla11g00412 . 137 242 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 73.6 2.8e-38 156.4
Cla05g00770 . 338 458 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 68.3 3.7e-38 156.0
Cla05g02367 . 363 532 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 50.6 4.1e-37 152.5
Cla01g00715 . 336 428 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 79.6 5.3e-37 152.1
Cla02g00509 . 244 352 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G18300 79.1 2.8e-39 159.8
Cla06g01221 . 206 421 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 66.0 9.0e-66 247.3
Cla02g01677 . 281 448 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 68.6 4.1e-50 195.3
Cla03g01576 . 146 308 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 62.0 1.8e-45 179.9
Cla09g00695 . 137 313 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 58.2 1.6e-43 173.3
Cla06g01221 . 208 422 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 61.2 2.9e-57 219.5
Cla02g01677 . 281 463 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 61.2 6.3e-44 175.3
Cla09g00695 . 148 311 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 59.8 6.9e-43 171.8
Cla03g01576 . 153 298 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 63.7 1.5e-42 170.6
Cla05g02367 . 352 537 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 55.9 6.4e-44 175.3
Cla01g00715 . 326 432 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 78.5 2.3e-41 166.8
Cla06g01463 CCT,ECH 132 249 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G25330 65.5 2.1e-37 152.9
Cla08g00517 . 116 250 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G25330 63.0 7.9e-37 151.0
Cla01g00715 . 326 510 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 53.8 4.4e-40 162.5
Cla05g02367 . 346 538 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 51.3 1.7e-39 160.6
Cla02g00509 . 250 385 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 64.5 4.1e-38 156.0
Cla05g02655 . 215 375 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 55.3 1.7e-36 150.6
Cla02g00509 . 252 357 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G48560 75.7 6.7e-38 155.6
Cla01g00715 . 322 483 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G48560 53.9 1.1e-37 154.8
Cla05g02367 . 357 456 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G48560 78.2 1.1e-37 154.8
Cla08g00027 . 22 202 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G35460 55.2 1.1e-49 193.7
Cla08g00027 . 22 240 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09180 60.3 1.9e-66 249.6
Cla06g01221 . 172 378 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 65.4 7.5e-59 224.6
Cla03g01576 . 142 298 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 60.2 6.8e-44 174.9
Cla02g01677 . 281 423 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 68.7 2.0e-43 173.3
Cla09g00695 . 130 307 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 54.0 5.8e-43 171.8
Cla03g00820 . 139 287 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G66470 67.5 1.3e-42 170.6
Cla10g00998 . 240 355 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G14760 67.6 5.8e-39 158.7
Cla02g00679 . 196 307 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G14760 71.9 5.8e-39 158.7
Cla10g00998 . 266 352 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 93.1 4.6e-39 159.1
Cla02g00679 . 223 307 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 94.1 1.7e-38 157.1
Cla05g02102 CCT,ECH 245 328 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 94.0 3.0e-38 156.4
Cla08g01617 CCT,ECH 236 321 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 87.2 5.6e-37 152.1
Cla03g00820 . 104 289 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G37800 57.2 2.7e-43 172.9
Cla09g00040 . 126 396 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 51.3 9.7e-64 241.1
Cla05g02049 CCT,ECH 86 256 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 59.3 2.0e-43 172.9
Cla02g01248 . 71 165 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 87.4 9.3e-41 164.1
Cla08g01577 CCT,ECH 118 209 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 85.9 7.3e-38 154.5
Cla09g01111 . 84 277 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G22490 54.3 1.1e-42 171.0
Cla08g01134 . 2 281 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 51.3 1.6e-51 200.3
Cla02g01570 . 107 285 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 54.1 2.2e-45 179.9
Cla09g01111 . 85 277 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 51.3 6.9e-39 158.3
Cla05g00351 . 64 377 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G24140 61.5 9.1e-92 334.3
Cla10g00537 . 90 289 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 55.4 4.8e-53 204.9
Cla02g00814 . 12 269 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 52.1 2.1e-40 162.9
Cla10g01302 . 7 233 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G41130 58.0 1.7e-59 226.5
Cla10g00559 . 322 451 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 70.8 2.8e-45 179.9
Cla05g01333 . 41 511 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 56.6 8.7e-118 421.0
Cla03g00378 . 775 1251 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 50.6 9.4e-104 374.4
Cla02g01113 . 108 341 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 54.4 2.1e-51 199.9
Cla01g01980 . 120 368 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 59.5 1.1e-47 187.6
Cla07g01594 . 119 358 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G43140 57.3 5.1e-58 221.9
Cla03g00376 CCT 161 282 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50915 65.9 8.3e-41 164.5
Cla10g00998 . 201 358 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G43175 55.0 7.9e-37 151.0
Cla06g00420 . 38 191 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 59.4 3.4e-43 172.2
Cla05g00714 . 41 197 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 54.8 1.9e-38 156.4
Cla06g00420 . 36 194 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 60.1 5.4e-46 181.4
Cla05g00714 . 39 200 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 52.3 8.4e-39 157.5
Cla07g01443 . 23 167 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05710 58.6 1.6e-42 169.5
Cla07g01443 . 21 154 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 65.7 2.8e-41 165.2
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001472 1 2 3 3 2 2 2 2 2 2 2 2 3 1 2 3 2 4 3 2 2 2 2 2 2 2 2 6 5 2 72
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
60494 PF00010 HLH 8.50E-09 No_clan Cla TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cla01g01980 Cla_Chr01 FPKM 6.743961 4.46792 9.20833 8.056563 7.747648 4.90585 6.141671 7.14002 5.863999 6.070747