Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla01g02066 | ATGGCCTCAATTGCTGGTTCCAAAGCTTCCTCAAATCAGCCACAAAAACCAGCTAATGGTGTAATGGCTAATGGAAAGGATACGGGGCTCTTGCCTCCGCAGATTTCGAAGTCAAGCAAACCTGCATCAGTTACTTCTGACCAGTCTAAATCAGTAAAGAATATCTCAAAGAAGGATATGGAAATATGTCCCGACAAAAAGTCACCAGTATCGAATCAAAATGGATCTGCTAAGTTGTTGACTGAAAAATTTAATTTCAGCATATCCTCACCTGGTCTGAAACAAACATCAACTGAAGTAGATTCCCCTCACAATGAAGATAAATGTTCACCTGGAAGCTCCCTAGACCAAGAGAAGAAAACATCAGAATATGGAAGTGTAAAGAGCAGTTCTTTTTCCGGCAAAGTAAGTGATGGGACTAGCTGTCTTGCCAAGACCAGTGGAAGTACAAAGGTTAGCGACCATGGTAACTTTGTTGAGAGTGGAAAGAGCAGTATATGTCGAGGGAGCACGAGCAGTGATGTAAGCGATGAGAGCTCTTGCAGTAGTTTTAGTAGTAGTATCAGTAAACCTCACAAAGCAAATGATTTGAGATGGGAGGCCATTCAAGTTGTCCGTGCAAAAGATGGGGCGATGGGATTAGGTCATTTTAGACTTCTGAAGAAGTTGGGTTGTGGGGATATTGGGAGTGTCTATCTCTCTGAGTTAAGGGGAACCAAATGCCATTTTGCAATGAAGGTTATGGATAAAAATACTCTAGCAAGTCGTAAAAAGTTGCTTCGTGCACAGACAGAAAGAGAAATACTTCAATCTCTTGATCACCCCTTCCTTCCAACGTTATACACCCACTTTGAGACGGAAAAATTCTCATGCTTGGTGATGGAGTTCTGCCCTGGAGGAGATTTGCACACTCTAAGGCAGAGGCAACCAGGAAAGCATTTTCCCGAGCAGGCAGTGAAATTCTATGTAGCAGAGGTTCTTCTTGCTCTGGAATACCTGCACATGCTTGGGATTGTGTACCGTGATCTTAAGCCAGAAAATGTTCTTGTGAGGGAAGATGGACACATAATGCTTTCAGATTTTGACCTATCTCTCCGTTGTGCTGTTAATCCGACTCTTGTCAAAAATCTCTCTGCAGAGTCGGAGGCTTTAAGAAAGAACACAGGTTACTGCGTGCAGCCTGCTTGCATTGAGCCTTCCTGCATCCAACCATCTTGTGTAGTTCCTACAACCTGCTTCTCACCTCGTCTCTTTTCTAGTAAGTCAAAGAAGGAACGAAAACCCAAAATTGATATGGGAAATCAGGTCAGCCCATTGCCAGAGCTCATAGCAGAACCAACCGATGCCCGATCCATGTCTTTCGTAGGAACCCATGAGTACTTGGCACCTGAGATAATCAAGGGCGAAGGCCATGGAAGTGCCGTGGATTGGTGGACTTTTGGAATTTTTCTATACGAGCTACTATTTGGTAAAACTCCTTTCAAGGGGTCGGGAAATCGAGCTACATTATTCAACATTGTCGGTCAGCCACTTCGGTTTCCAGATGCACCAGTTGTGAGTTTTGCTGCAAAGGATCTGATAAGAGGATTGCTAGTGAAGGAACCACAACAAAGATTGGCTTATAAACGTGGAGCAACTGAGATTAAGCAGCATCCTTTCTTTGAAGGTGTAAATTGGGCATTAATACGTTGTGCCACTCCACCCGAAATCCCAAGGCCGGTCGAGATTGAGAGAATACCACATGCAGTGGCGTCAACCAGTGAAAAGGCTGCAGCTATAGCAGCATTTCAAATTGATGTTGCACAAAATCCAAACTACCTTCCCAGTATCCTCAGGAATATCAATATTTGCATTCATCTAATCTACAGTACTACATTGAAATCAAGAATATAA | 1893 | 43.37 | MASIAGSKASSNQPQKPANGVMANGKDTGLLPPQISKSSKPASVTSDQSKSVKNISKKDMEICPDKKSPVSNQNGSAKLLTEKFNFSISSPGLKQTSTEVDSPHNEDKCSPGSSLDQEKKTSEYGSVKSSSFSGKVSDGTSCLAKTSGSTKVSDHGNFVESGKSSICRGSTSSDVSDESSCSSFSSSISKPHKANDLRWEAIQVVRAKDGAMGLGHFRLLKKLGCGDIGSVYLSELRGTKCHFAMKVMDKNTLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQRQPGKHFPEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVNPTLVKNLSAESEALRKNTGYCVQPACIEPSCIQPSCVVPTTCFSPRLFSSKSKKERKPKIDMGNQVSPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNIVGQPLRFPDAPVVSFAAKDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPRPVEIERIPHAVASTSEKAAAIAAFQIDVAQNPNYLPSILRNINICIHLIYSTTLKSRI | 630 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 35111622 | 35115303 | + | ClCG01G021180.2 | Cla01g02066 | 265655 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla01g02066 | 630 | MobiDBLite | consensus disorder prediction | 31 | 51 | - | - | |
Cla01g02066 | 630 | MobiDBLite | consensus disorder prediction | 162 | 190 | - | - | |
Cla01g02066 | 630 | MobiDBLite | consensus disorder prediction | 115 | 140 | - | - | |
Cla01g02066 | 630 | MobiDBLite | consensus disorder prediction | 100 | 114 | - | - | |
Cla01g02066 | 630 | CDD | STKc_phototropin_like | 216 | 577 | - | - | |
Cla01g02066 | 630 | PANTHER | SERINE/THREONINE KINASE FAMILY PROTEIN | 5 | 590 | - | - | |
Cla01g02066 | 630 | PANTHER | FLIPPASE KINASE 1-RELATED | 5 | 590 | - | - | |
Cla01g02066 | 630 | SMART | serkin_6 | 217 | 554 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla01g02066 | 630 | MobiDBLite | consensus disorder prediction | 89 | 140 | - | - | |
Cla01g02066 | 630 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 338 | 350 | IPR008271 | GO:0004672|GO:0006468 | |
Cla01g02066 | 630 | Pfam | Protein kinase domain | 451 | 554 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla01g02066 | 630 | Pfam | Protein kinase domain | 218 | 367 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla01g02066 | 630 | ProSiteProfiles | Protein kinase domain profile. | 217 | 554 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla01g02066 | 630 | MobiDBLite | consensus disorder prediction | 1 | 76 | - | - | |
Cla01g02066 | 630 | Gene3D | Transferase(Phosphotransferase) domain 1 | 301 | 368 | - | - | |
Cla01g02066 | 630 | SUPERFAMILY | Protein kinase-like (PK-like) | 192 | 581 | IPR011009 | - | |
Cla01g02066 | 630 | Gene3D | Transferase(Phosphotransferase) domain 1 | 448 | 572 | - | - | |
Cla01g02066 | 630 | MobiDBLite | consensus disorder prediction | 1 | 19 | - | - | |
Cla01g02066 | 630 | Gene3D | Phosphorylase Kinase; domain 1 | 215 | 300 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g02066 | Cla-Chr1:35111622 | Cla10g01319 | Cla-Chr10:28103576 | 0 | dispersed | |
Cla04g00118 | Cla-Chr4:3421773 | Cla01g02066 | Cla-Chr1:35111622 | 0 | transposed | |
Cla11g00263 | Cla-Chr11:3058151 | Cla01g02066 | Cla-Chr1:35111622 | 1.78E-147 | transposed | |
Cla01g01115 | Cla-Chr1:18346000 | Cla01g02066 | Cla-Chr1:35111622 | 0 | wgd | |
Cla01g02066 | Cla-Chr1:35111622 | Cla02g00317 | Cla-Chr2:3073844 | 4.48E-103 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80291 | PF00069 | Pkinase | 6.90E-38 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla01g02066 | K08286 | - | csv:101209748 | 1101.66 |