Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla01g02105 | ATGGCGACCTCATGTTTCGGTTCACTTAGGATTCGTAAATCGAAGAGCAAACCCTTATCAACCCCTTCCTCGTTGAAATCCCAGATGAATTCTGAAATGGAAAATATGGAAAGGAGAAGATTTGATAGTTTGGAATCGTGGTCAATGATCCTAGAGTCTGAAAATGTGGAAACCTGGGAGACAGCAAAGGAGGATCAGGAGGAGTGGACAGCTGATCTATCTCAACTCTTCATTGGTAACAAATTTGCCTCTGGTGCTCACAGTCGGATTTACCGTGGAATTTACAAGCAGAGAGCCGTTGCTGTGAAGATGGTGAGAATTCCAAACCAAAAAGAGGAAACAAGAGCCAAACTCGAGCAACAGTTCAAGTCTGAAGTTGCCTTGCTTTCTCGTCTCTTTCATCCCAACATAGTTCAGTTCATTGCAGCCTGTAAAAAGCCACCTGTATACTGCATAATTACAGAGTATATGTCACAAGGAACTCTGAGGATGTATCTTAACAAGAAAGAGCCATATTCACTCTCAACAGAAACAATATTGAGGTTAGCTCTTGACATATCAAGAGGAATGGAATACCTCCATTCCCAAGGAGTAATCCACAGAGACCTCAAATCAAACAACTTGCTTCTAAATGATGAAATGAGAGTAAAAGTAGCCGATTTCGGAACATCCTGCCTCGAAACACAGTGCCGAGAATCAAAAGGGAACATGGGAACTTACCGATGGATGGCGCCGGAGATGATCAAGGAGAAGCCTTATACTCGCAAAGTTGATGTGTACAGCTTTGGGATTGTGCTGTGGGAGCTTACCACGGCTCTGCTTCCGTTTCAAGGGATGACCCCCGTGCAAGCTGCCTTTGCCGTCGCCGAGAAGGTACCAAATCTCAAACACCCCGTTCCACAAAATGAGAGGCCACCATTACCGGCGAGTTGTCAGCCGGCACTAGCCCACCTGATAAAGCGGTGTTGGGCGGCGAATCCGTCGAAGCGGCCGGATTTCAGCGACATTGTGGTGGCTTTGGAGAAATACGATGAGTGTGTGAAAGAGGGTCTTCCCCTTGCACACCATAGGAGATTGGTAAACCGAAACGCCATTATCGAACGCTTGAAAGCTTGCGCTTCAACCAGTTCTTCAATCCCTGTACATGCCTAA | 1152 | 46.18 | MATSCFGSLRIRKSKSKPLSTPSSLKSQMNSEMENMERRRFDSLESWSMILESENVETWETAKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQKEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETILRLALDISRGMEYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETQCRESKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKVPNLKHPVPQNERPPLPASCQPALAHLIKRCWAANPSKRPDFSDIVVALEKYDECVKEGLPLAHHRRLVNRNAIIERLKACASTSSSIPVHA | 383 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 35335976 | 35338547 | - | ClCG01G021570.1 | Cla01g02105 | 265694 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla01g02105 | 383 | SUPERFAMILY | Protein kinase-like (PK-like) | 52 | 337 | IPR011009 | - | |
Cla01g02105 | 383 | MobiDBLite | consensus disorder prediction | 13 | 32 | - | - | |
Cla01g02105 | 383 | Gene3D | Phosphorylase Kinase; domain 1 | 65 | 158 | - | - | |
Cla01g02105 | 383 | SMART | serkin_6 | 76 | 347 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla01g02105 | 383 | CDD | STKc_MAP3K-like | 83 | 337 | - | - | |
Cla01g02105 | 383 | ProSiteProfiles | Protein kinase domain profile. | 76 | 359 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla01g02105 | 383 | Gene3D | Transferase(Phosphotransferase) domain 1 | 159 | 364 | - | - | |
Cla01g02105 | 383 | PANTHER | SERINE/THREONINE-PROTEIN KINASE HT1-LIKE ISOFORM X1 | 9 | 371 | - | - | |
Cla01g02105 | 383 | MobiDBLite | consensus disorder prediction | 14 | 31 | - | - | |
Cla01g02105 | 383 | Pfam | Protein tyrosine and serine/threonine kinase | 78 | 339 | IPR001245 | GO:0004672|GO:0006468 | |
Cla01g02105 | 383 | PRINTS | Tyrosine kinase catalytic domain signature | 257 | 279 | IPR001245 | GO:0004672|GO:0006468 | |
Cla01g02105 | 383 | PRINTS | Tyrosine kinase catalytic domain signature | 192 | 210 | IPR001245 | GO:0004672|GO:0006468 | |
Cla01g02105 | 383 | PRINTS | Tyrosine kinase catalytic domain signature | 238 | 248 | IPR001245 | GO:0004672|GO:0006468 | |
Cla01g02105 | 383 | PRINTS | Tyrosine kinase catalytic domain signature | 154 | 167 | IPR001245 | GO:0004672|GO:0006468 | |
Cla01g02105 | 383 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 198 | 210 | IPR008271 | GO:0004672|GO:0006468 | |
Cla01g02105 | 383 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 9 | 371 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g02105 | Cla-Chr1:35335976 | Cla01g02251 | Cla-Chr1:36458051 | 5.53E-109 | dispersed | |
Cla10g00044 | Cla-Chr10:506616 | Cla01g02105 | Cla-Chr1:35335976 | 6.09E-61 | dispersed | |
Cla10g01559 | Cla-Chr10:30987786 | Cla01g02105 | Cla-Chr1:35335976 | 7.11E-39 | dispersed | |
Cla01g02105 | Cla-Chr1:35335976 | Cla01g01294 | Cla-Chr1:26249281 | 9.87E-135 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80292 | PF07714 | PK_Tyr_Ser-Thr | 6.20E-65 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla01g02105 | - | - | cmo:103484647 | 725.702 |