Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g02154 ATGGAGTTACTCGATGCCCTTCTTCTCCTCTTCGCCTTCCTTTTTTTCTCCTTATGGTGGCGATACTGGTCCGCCACCGGCGGTGGGTCGAAGAATCTTCCGCCGGGGCCACCGGGCTGGCCGATCGTAGGAAACCTAATCCAAGTCATCCTCCAGCGTCGCCCATTCATCTTCGTAGCACGCGATTTACGTGAAAAATACGGTCCCATTTTCACCATGCAAATGGGGCAACGCACACTCATCATTGTGTCCAGTGCCGAACTCATTCATGAAGCTCTCGTGCAACGTGGTCCCCTATTCGCCAGCCGCCCTGCCGACTCCCCCATCCGCCTCGTCTTCAGCGTCGGCAAATGCGCTGTCAACTCCGCCGAATACGGCCCTCTCTGGCGAACCCTCCGCCGCAACTTCGTCACGGAGCTGATCAACCCATCCAGAATCAAACAGTGCAGCTGGATACGGAAGTGGGCCATAGAAAGCCATCTGGATAGGCTAAGGAAAGAAAATTCGGAGAAGGGATTCGTGGAGGTTATGAGTAACTGCCGGTTGTCAGTGTGCAGTATTTTGATCTGCATATGCTTTGGAGCGAAAATCCCGGAACAGGAGATTAAGGTGATAGAGAGTATACTGAAGGACGTGATGTTGATAACGTTGCCGAAGCTTCCGGATTTTTTGCCGATTCTGACGCCGTTGTTCCGGCGGCAGTTGAAGCAGGCGAAGGAGCTGAGGAGGAAACAGTTGGAGTGTTTGATTCCGTTGATAAGGAACAGGAGGATGTTTGTGGAGAGGAATGGGGATGAGAGTGTGAGGGAGGAGTTGCCGGAGATGGTTAGTCCGATTGGGGCGGCGTATCTTGATTCGCTGTTTGAACTGGAAACGCCGGGAAGAGGGCGGTTGGGGGAGGAGGAACTGGTGACGCTTTGTTCGGAGGTTATTAATGCTGGAACTGATACGAGCGCGACGGCGTTGGAATGGGCTTTGCTTCATTTGGTACAAGATCAAGATATTCAGGAAAGACTGTACAACGAAATTATTAACGTTGTGGGTAAAGATGGGTTGATTACCGAAGGCGACATAGAGAAAATGCCTTATTTAGGGGCAGTGGTAAAAGAGACTTTCCGGCGACACCCACCAAGCCATTTCTTACTATCTCACGCAGCGACCAAAGAAACAGAGCTCGGCGGGTACACAATTCCGGCGGACGCCAGCGTGGAGTTTTACACGGCCCATTTGTCTGACGACCCGAACGCGTGGGAAGAACCGGGTTCATTCCGACCGGATAGGTTCTTGGAAGGCGACGGCGTTGGCGTGGACGTCACAGGAACTAAGAGCGTCAAAATGGTGCCGTTCGGGGCAGGGCGGCGGATCTGCCCAGCCATGACATTGGGCACGTTACACGTGCACATGATGCTGGCAAAAATGGTACACGCTTTCAAGTGGGTCCCGGTTCCCGGAGCCCCACCCGACCCGACCGAGACTTTTGCCTTTACGGTGATTATGAAGAATCCTCTGAAGGCTATCGTATTGGAGAGGGAGCTTGCCAGAGACTTGGGTGAAAAGGGTGTCTTAGTTTTTTCTGATTTCGAACATGTCATCCTCAAAAGTGATCGTTCTCTTGTTGAAGTGTTCAAGTTGTTTGACCTGATCCACGTGGTCACCACTGATCATACAACTATTACAAGAATCACGAGAGAAGTTGTTGAAGATTTTGCTTATGAGAATGTTGTTTACATTGAGTTAAGAACAACTCCAAAGAAAAATAAGTCAATTGGAATGAGCAAACGGTCATACATGGAAGCAGTTGTGGAAGGTCTGAAAAGTATCAATAGTGTTGATGTTGCTTTCATGCCACATGATGTTGATGCCCGAAGTTCGTTGAATTCTATGTCTATAGACAACACTAGTAATGTAATTCCAAGAAAAAGGATATATGTTAGACTTCTTCTAAGCATCGACCGACGAGAGACCACTGAAGATGCCATGGAAACTGTGAAACTTGCACTAGAATTGAAAGATGTGGGAGTAGTTGGTATTGATCTTTCAGGAAATCCAATTGTGGGTGAATGGACCACCTTTTGGCCTGCTCTTCAATTTGCAAAAGAAAATGGCCTTGCCATAACACTACACTGTGGCGAGGTACCTAATCCAAAGGAGATTCAAGCTATGCTAGACTTTTGGCCTCAGAGGATTGGCCATGCTTGTTTCTTTGAAGGAGAAGACTGGGAAAAGCTGAAACGCTTAAAAATTCCGGTTGAAATTTGCTTGACATCCAATATTCGGACCAATTCAATCTCTTCACTAGATGTTCATCACTTTGCTGACTTGTACAAAGCAAACCATCCTTTAGTAATCTGCACTGATGATTCTGGGGTTTTCTCAACAAGCGTTTCAAAAGAATACAGTCTGGCAGCCTCTGCTTTTGGTCTTGGAAAAAAGGAAATATTTCAGTTGGCAAGAGACGCTATTGAATTTATATTTGCAGACGATGAAATAAAGAAGATTCTGAAACAGGCGTTCGATTCTTTTGTACCAAACCTGGCTCTATGA 2544 47.76 MELLDALLLLFAFLFFSLWWRYWSATGGGSKNLPPGPPGWPIVGNLIQVILQRRPFIFVARDLREKYGPIFTMQMGQRTLIIVSSAELIHEALVQRGPLFASRPADSPIRLVFSVGKCAVNSAEYGPLWRTLRRNFVTELINPSRIKQCSWIRKWAIESHLDRLRKENSEKGFVEVMSNCRLSVCSILICICFGAKIPEQEIKVIESILKDVMLITLPKLPDFLPILTPLFRRQLKQAKELRRKQLECLIPLIRNRRMFVERNGDESVREELPEMVSPIGAAYLDSLFELETPGRGRLGEEELVTLCSEVINAGTDTSATALEWALLHLVQDQDIQERLYNEIINVVGKDGLITEGDIEKMPYLGAVVKETFRRHPPSHFLLSHAATKETELGGYTIPADASVEFYTAHLSDDPNAWEEPGSFRPDRFLEGDGVGVDVTGTKSVKMVPFGAGRRICPAMTLGTLHVHMMLAKMVHAFKWVPVPGAPPDPTETFAFTVIMKNPLKAIVLERELARDLGEKGVLVFSDFEHVILKSDRSLVEVFKLFDLIHVVTTDHTTITRITREVVEDFAYENVVYIELRTTPKKNKSIGMSKRSYMEAVVEGLKSINSVDVAFMPHDVDARSSLNSMSIDNTSNVIPRKRIYVRLLLSIDRRETTEDAMETVKLALELKDVGVVGIDLSGNPIVGEWTTFWPALQFAKENGLAITLHCGEVPNPKEIQAMLDFWPQRIGHACFFEGEDWEKLKRLKIPVEICLTSNIRTNSISSLDVHHFADLYKANHPLVICTDDSGVFSTSVSKEYSLAASAFGLGKKEIFQLARDAIEFIFADDEIKKILKQAFDSFVPNLAL 847
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 35685221 35701259 - ClCG01G022090.2 Cla01g02154 265743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g02154 847 SUPERFAMILY Cytochrome P450 34 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g02154 847 SUPERFAMILY Metallo-dependent hydrolases 530 840 IPR032466 -
Cla01g02154 847 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 509 - -
Cla01g02154 847 Gene3D - 509 842 - -
Cla01g02154 847 CDD ADA_AMPD 540 834 - -
Cla01g02154 847 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Cla01g02154 847 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g02154 847 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g02154 847 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g02154 847 Gene3D Cytochrome P450 25 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g02154 847 PANTHER CYTOCHROME P450 LIKE PROTEIN 4 509 - -
Cla01g02154 847 Pfam Cytochrome P450 34 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g02154 847 Pfam Adenosine deaminase 533 836 IPR001365 GO:0019239
Cla01g02154 847 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g02154 847 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g02154 847 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g02154 847 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g02154 847 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g02154 847 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g02154 847 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g02154 847 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g02154 Cla-Chr1:35685221 Cla05g02200 Cla-Chr5:33704012 4.23E-146 dispersed
Cla01g02154 Cla-Chr1:35685221 Cla08g00822 Cla-Chr8:20641581 7.41E-158 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g02154 K21995 - csv:101216852 987.638