Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g02156 CGCCCCCTTCCCACTCTTTTCCCTCAACAAGAACATCCTCTCTCTCAACAAATTCTCCTCCCTTTGCCTTTCCAAATCAATTCGAATATCTGCAAAAATCTCCCATCTGGGTTTGATTCTTTTTCTGTTTCGCAATATCAGATTTTTGGAAACACCATGATCTCTTCACTGAGGCTTACATCTACCAATTACACTTCCTCTGAAATTTTGAACAGAAAATCTCCAGTTCTGAGGCCGAATCTTCCATTGCAGTCCCCGGATTGCAGTGCCCTTAAACATGTCGATCGGTCTCTTTCTACCAACAAACCACTTCACATCTCGTCCGTTGAAAATCTTTCTTTGCCCACAAAATCATTGGAGCGTTCGACGGTGTCCATGGCTTATGAGGCCGAATCGCGGCCTCTGCAGATTAACATTGAGCTTCCTGATGAACAAACGACACAGAAACTCAAAATTGGACTCTATTTCGCCACTTGGTGGGCTTTGAATGTGGTGTTCAATGTCTACAACAAGAAGGTTCTTAATGCCTTCCCTTTTCCTTGGCTCACTTCCACTCTCTCCCTCGCCGCTGGATCGCTCATGATGCTCGTTTCTTGGGCGACTCGAATGGTCGCAGTGGCACATACGATTGGGCATGTTGCAGCAACTGTGAGCATGTCCAAAGTTGCAGTCTCATTCACTCACATAATCAAGAGTGGGGAGCCGGCTTTTAGCGTGCTGGTCTCTAGGTTTCTGTTGGGTGAGATGTTTCCATTGCCTGTTTACTTATCTCTTATCCCAATCATCGGAGGGTGCGCTCTTTCCGCCTTTACTGAGCTCAATTTCAACATGATTGGTTTCTCGGGAGCGATGGTATCGAACTTGGCATTTGTGTTTAGAAACATATTTTCGAAGAAAGGGATGAAGGGAAAGTCAGTTAGTGGGATGAATTACTATGCTTGCCTCTCATTGCTCTCTCTGCTAATTCTTACTCCTTTCGCCATTGCTGTGGAGGGACCCAAGTTGTGGGCTGAAGGATTCCAAAAGGCTCTCTCTCAAATTGGTCCCAATTTCATTTGGTGGTTGGGAGCTCAAAGTATGTTCTATCACTTGTACAATCAAGTGTCTTACATGTCTCTTGATCAGATATCGCCATTGACATTCAGCGTTGGTAACACAATGAAGAGAATATTCGTAATAGTATCATCCATTATCATCTTCCACACGCCTATCCGACCCGTAAACGCCATTGGAGCTGCCATTGCAATCCTTGGAACGTTCCTCTACTCGCAGGCAAAGCTGTGA 1284 45.25 RPLPTLFPQQEHPLSQQILLPLPFQINSNICKNLPSGFDSFSVSQYQIFGNTMISSLRLTSTNYTSSEILNRKSPVLRPNLPLQSPDCSALKHVDRSLSTNKPLHISSVENLSLPTKSLERSTVSMAYEAESRPLQINIELPDEQTTQKLKIGLYFATWWALNVVFNVYNKKVLNAFPFPWLTSTLSLAAGSLMMLVSWATRMVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGEMFPLPVYLSLIPIIGGCALSAFTELNFNMIGFSGAMVSNLAFVFRNIFSKKGMKGKSVSGMNYYACLSLLSLLILTPFAIAVEGPKLWAEGFQKALSQIGPNFIWWLGAQSMFYHLYNQVSYMSLDQISPLTFSVGNTMKRIFVIVSSIIIFHTPIRPVNAIGAAIAILGTFLYSQAKL 427
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 35708258 35710600 - ClCG01G022110.1 Cla01g02156 265745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g02156 427 PANTHER SOLUTE CARRIER FAMILY 35 90 426 - -
Cla01g02156 427 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 90 426 - -
Cla01g02156 427 SUPERFAMILY Multidrug resistance efflux transporter EmrE 320 424 - -
Cla01g02156 427 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 150 426 IPR004696 GO:0016021|GO:0022857|GO:0055085
Cla01g02156 427 Pfam Triose-phosphate Transporter family 150 423 IPR004853 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g02156 Cla-Chr1:35708258 Cla05g00261 Cla-Chr5:2381406 1.09E-95 dispersed
Cla01g02156 Cla-Chr1:35708258 Cla10g00522 Cla-Chr10:6894821 1.18E-172 wgd
Cla01g02156 Cla-Chr1:35708258 Cla05g01512 Cla-Chr5:24598117 6.08E-27 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g02156 K15283 - csv:101216621 637.876