Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g02251 ATGGACGAAGAGGCTAATTCTTGGCTTAGGAGAACGAAGTTTTCTCACACAGTTTATCATCGATGGGACTCATTAAGATTAAACTCAGTTCCTTTCATCGTCGAACCATCTCGTAATTCTGGCTTGAAATCGAGGCCTACATCAGCTTCCTCCACTCAGAAACCAAATCCTGATATTTCGAAGATTCAGCGAAGCTTCATATCCAATAAACAGAGGTCTCTGTCTCCTCTTCCCGAGAGCAATCTCTCTGAAGTTTTCAAGGAAGCGAAATCCGACAGTAAGAGATTCTCAACTCCAACTCCTCGACTTAGAGAACGAACTAAGGAATTCAAGAACAAGCTATTCAATAAGGACCCGCAAGATTCAAAATCGGCCGATTCCAAGTCATCGTCGAATACCAGTCCCCTGAAACTCCTATCTTCGGGGAAAGGGGGTGATAAGTCAAAGTTCCGGAAAGATTCTTCCTGGACCAAATACTTCGATTCCGGTGGAGGAAAAGTCACCGCGGTCGAAACAGCCGAAGACTGGACTGTTGATCTCTCCAAGTTGTTTGTTGGGTTAAGGTTTGCTCATGGAGCTCACAGTCGTCTTTATCATGGAAAATACAATGATGAACCTGTTGCTGTTAAAATTATTAGGGTGCCCGAGGATGACGAAAATGGAACGCTTGCTTCTCGATTGGAGAAACAATTTACCAGAGAAGTTACCCTTTTATCTCGTCTCCATCATCCGAATGTTATAAAGTTTGTAGCTGCGAGTAGGAACCCACCTGTATACTGTGTCATTACTGAATATTTGTCCCAAGGATCATTACGGGCATACTTACACAAACTTGAGCACCAATCCCTCCCTTTGCAAAAACTAATTGAATTTGCTTTAGATGTCGCTCGTGGCATGGAATACCTTCACTCACAAGGCGTAATTCATCGGGATCTTAAGCCTGAGAATGTTCTTATTGATGAAGACTTCCACTTGAAAATTGCAGATTTTGGTATAGCTTGTCCTGAGGCCTTTTTCGACCCATTAGCTGATGATCCCGGAACTTATCGGTGGATGGCACCGGAGATGATCAAACATAAACCTTGTAGTCGAAAGGTCGATGTGTACAGCTTTGGGCTTATGTTGTGGGAAATGGTGTCTGGTGCAATTCCATACGAGGATATGACTCCCATTCAAGCAGCCTTTGCTGTTGTGAATAAGACAGCAGAATATGCTTCAGAGGATAAGCTACTGAATCTTAGGCCTGTTATTTCAAGTGATTGTCCATTGGCAATGCGGGCTTTAATCGAGCAATGTTGGTCCCTACAACCGGACAAGAGACCCGATTTCTGGCAGATTGTGAAGGTACTAGAGCAATTCAAATCTTCGCTTGCCCGTGATGGGACACTGAATTTATTAGGTAACCCTCTGTCTAGTTTCCAAGACCATAAGAAAGGGCTTCTCCATTGGATTCAAAAGCTTGGCCCCCTGCATCCTGAAACCTCGCCCTCTCCTGTGCCGAAACCGAAATTCTCGTAA 1518 44.07 MDEEANSWLRRTKFSHTVYHRWDSLRLNSVPFIVEPSRNSGLKSRPTSASSTQKPNPDISKIQRSFISNKQRSLSPLPESNLSEVFKEAKSDSKRFSTPTPRLRERTKEFKNKLFNKDPQDSKSADSKSSSNTSPLKLLSSGKGGDKSKFRKDSSWTKYFDSGGGKVTAVETAEDWTVDLSKLFVGLRFAHGAHSRLYHGKYNDEPVAVKIIRVPEDDENGTLASRLEKQFTREVTLLSRLHHPNVIKFVAASRNPPVYCVITEYLSQGSLRAYLHKLEHQSLPLQKLIEFALDVARGMEYLHSQGVIHRDLKPENVLIDEDFHLKIADFGIACPEAFFDPLADDPGTYRWMAPEMIKHKPCSRKVDVYSFGLMLWEMVSGAIPYEDMTPIQAAFAVVNKTAEYASEDKLLNLRPVISSDCPLAMRALIEQCWSLQPDKRPDFWQIVKVLEQFKSSLARDGTLNLLGNPLSSFQDHKKGLLHWIQKLGPLHPETSPSPVPKPKFS 505
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 36458051 36461746 - ClCG01G023030.1 Cla01g02251 265840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g02251 505 MobiDBLite consensus disorder prediction 125 139 - -
Cla01g02251 505 Gene3D Transferase(Phosphotransferase) domain 1 268 470 - -
Cla01g02251 505 SMART serkin_6 183 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla01g02251 505 Pfam Protein tyrosine and serine/threonine kinase 190 450 IPR001245 GO:0004672|GO:0006468
Cla01g02251 505 SUPERFAMILY Protein kinase-like (PK-like) 170 451 IPR011009 -
Cla01g02251 505 MobiDBLite consensus disorder prediction 37 151 - -
Cla01g02251 505 Gene3D Phosphorylase Kinase; domain 1 171 267 - -
Cla01g02251 505 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 3 477 - -
Cla01g02251 505 ProSitePatterns Serine/Threonine protein kinases active-site signature. 307 319 IPR008271 GO:0004672|GO:0006468
Cla01g02251 505 MobiDBLite consensus disorder prediction 85 124 - -
Cla01g02251 505 ProSiteProfiles Protein kinase domain profile. 183 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla01g02251 505 CDD STKc_MAP3K-like 190 450 - -
Cla01g02251 505 PRINTS Tyrosine kinase catalytic domain signature 263 276 IPR001245 GO:0004672|GO:0006468
Cla01g02251 505 PRINTS Tyrosine kinase catalytic domain signature 347 357 IPR001245 GO:0004672|GO:0006468
Cla01g02251 505 PRINTS Tyrosine kinase catalytic domain signature 301 319 IPR001245 GO:0004672|GO:0006468
Cla01g02251 505 PRINTS Tyrosine kinase catalytic domain signature 366 388 IPR001245 GO:0004672|GO:0006468
Cla01g02251 505 PANTHER TYROSINE KINASE FAMILY PROTEIN 3 477 - -
Cla01g02251 505 MobiDBLite consensus disorder prediction 40 80 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01294 Cla-Chr1:26249281 Cla01g02251 Cla-Chr1:36458051 7.41E-107 dispersed
Cla01g02105 Cla-Chr1:35335976 Cla01g02251 Cla-Chr1:36458051 5.53E-109 dispersed
Cla01g02251 Cla-Chr1:36458051 Cla11g01089 Cla-Chr11:22239628 7.75E-88 dispersed
Cla01g02251 Cla-Chr1:36458051 Cla03g00768 Cla-Chr3:9323890 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80302 PF07714 PK_Tyr_Ser-Thr 1.10E-56 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g02251 - - csv:101204268 921.383