Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g02285 ATGGTACTCCCGTTATTGAAGCTCGGAACCCTGGCGTTGAAAACTCTGAGCAAGCCGCTCGGTAATAGGCTCAAGAAACAAGCTGCGTTGCACCCCAGATTTAGGCAGTTCATCATTAATGTGGCCCAGATTAACCATCGGATGTCAACGCAAATGCAAAGACGCATATACAGTCATGCAACTGATGTAGAAATTCGCCCTCTGGATGAGGAGAAAGCAGTTCAGGCTGCTGTTGACCTGATTGGCGAGGTTTTTGTCTTCTCGGTAGCCGGAGCAATAGTGATATTTGAGGTTCAAAGAAGTGCTAGGTCAGAAGCCAGAAAAGAAGAACTACGCAGACAAGAAATGGAGGCACTGAGGCAAAGGGACGAAAGCTTATCGACAGAAATGGAACTTTTGAAGCTTAAACTTGTAGAATTGGAACAACAAGCCAAAGGACGAGGTCTTGGTGGTGTCCTTGCACTTTCTTGCTCCATATTGTGGGAGGTCCAAGCCCTGTTCAGAACTAGGGCTTGCCATTCACCTGCTACCCATTTTCCTGCGAGTTCCTCGGAGAAAAGTTTGAGTTCTGTAATGGGAAAGCATTCAAAGACCAGTTGCAAGTCGGCTTCCCACAAGCTATTTAAGGATAAGGCAAAGAACCGGGTTGATGATCTGCAAAGCATATTTGTAGATTTGCAGTATGCAAGGAAAGAGAGCCGCACGGTTGATGTGACAGTTCTCGAGGAACAAGTCCATCAGATGCTTCGTGAGTGGAAAGCTGAGCTGAACGAGCCCTCTCCAGCATCCTCTTTGCAACAAGGTGGAAGTCTTGGGTCATTTTCATCGGACATTTGTCGATTGTTGCAACTTTGCGAGGAGGATGATGATGCGTCTAGTCCATTAGCTGCTCCTAAGCCCGAACCTAATGAACAAAATTTGCAGGTTCTTAGTGTCACTATTAACCTACTTCAGGGATATAATGTGAATCATGGACACCAAGAACCAAGCTTCCCTCTGGTTGATCAATGCAAGAACTCCCCTTCAGGAGTGCATGGTATGGCTATGAATAACTTGGAAGGACCTACACAATTGGAGTGTCATCAGTTTGATTTACATCAAGGCATTGAGCACAACTTCTACTCTATTCTTAATGGTAGAGGATTATGTGGGGAGGGTGCAATTCCTCATGTTTCTAGCTACTGTCCCAGCATTTGCCCTCCACCTGCTGCTTTTTTGGGTCCAAAATGTGCGCTTTGGGATTGCCCACGACCTGCCCAAGGGATGGATTGGTGTGAGGACTACTGTAGCAGCTTTCATGCTGCCTTAGCATTGAATGAAGGCCCTCCTGGAATGGGTCCAGTTTTAAGACCTGGTGGAATTGGTCTGAAGGATGGTTTGCTTTTTGCTGCTCTTAGTGCAAAGGCACAAGGGAAAGATGTTGGTATCCCTGAATGTGAGGGAGCTGCCACGGCAAAATCCCCATGGAATGCTCCTGAGCTTTTTGATCTGTCAATATTGGAGGGTGAGATGATTAGGGAGTGGCTTTTCTTTGATAAGCCTCGTAGAGCATTTGAGAGTGGGAATAGAAAGCAGAGGTCACTGCCTGATTACAGTGGACGTGGTTGGCACGAGTCAAGAAAGCAAGTGATGAATGAGTTTGGAGGGCTGAAAAGATCTTATTACATGGATCCTCAGCCATTGAACCACTTTGAGTGGCATCTTTATGAATATGAAATTAATAAGTATGATGCCTGCGCTTTGTATAGATTGGAGCTGAAACTTGTCGATGGGAAAAAAGGTTCTAAGGCAAAGGTATCTAATGATTCAGTTGCTGATTTACAGAGGCAAATGGGGAGATTGACCGCCGAATTTCCTGATAATAAACGCTTTGTTAAGGGGAGGACCAGAATTAACACAAAAGTTGGTCTTGGAAATGTTTACCCCTCAGCAAATAGAGTCATGCCGCCCAATGGAACATATGACTATATGCTTCATGCACAATATGATTACCTTGTGGAGAATTTGAGTGAATATTACCTTACATAG 2028 45.12 MVLPLLKLGTLALKTLSKPLGNRLKKQAALHPRFRQFIINVAQINHRMSTQMQRRIYSHATDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVIFEVQRSARSEARKEELRRQEMEALRQRDESLSTEMELLKLKLVELEQQAKGRGLGGVLALSCSILWEVQALFRTRACHSPATHFPASSSEKSLSSVMGKHSKTSCKSASHKLFKDKAKNRVDDLQSIFVDLQYARKESRTVDVTVLEEQVHQMLREWKAELNEPSPASSLQQGGSLGSFSSDICRLLQLCEEDDDASSPLAAPKPEPNEQNLQVLSVTINLLQGYNVNHGHQEPSFPLVDQCKNSPSGVHGMAMNNLEGPTQLECHQFDLHQGIEHNFYSILNGRGLCGEGAIPHVSSYCPSICPPPAAFLGPKCALWDCPRPAQGMDWCEDYCSSFHAALALNEGPPGMGPVLRPGGIGLKDGLLFAALSAKAQGKDVGIPECEGAATAKSPWNAPELFDLSILEGEMIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEINKYDACALYRLELKLVDGKKGSKAKVSNDSVADLQRQMGRLTAEFPDNKRFVKGRTRINTKVGLGNVYPSANRVMPPNGTYDYMLHAQYDYLVENLSEYYLT 675
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 36725623 36736756 + ClCG01G023360.2 Cla01g02285 265874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g02285 675 Coils Coil 101 143 - -
Cla01g02285 675 MobiDBLite consensus disorder prediction 176 196 - -
Cla01g02285 675 Pfam Optic atrophy 3 protein (OPA3) 6 126 IPR010754 -
Cla01g02285 675 PANTHER TRANSCRIPTION FACTOR VOZ1 192 675 - -
Cla01g02285 675 MobiDBLite consensus disorder prediction 175 196 - -
Cla01g02285 675 PANTHER TRANSCRIPTION FACTOR VOZ1 192 675 IPR039277 GO:0006355|GO:0048578
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g02285 Cla-Chr1:36725623 Cla02g00997 Cla-Chr2:17493030 0 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
60523 PF07047 OPA3 2.10E-41 No_clan Cla TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g02285 - - csv:101219536 952.97