Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g02325 ATGGCCGACCGGCCGGACCCTGACAAGAAGACCGAAACCACCAGGAAGGACATGCCCGCGCTTCTTTTGGGCCGATACGAGATCGGGAAGCTCCTTGGCCATGGGACCTTCGCTAAGGTCTACCATGCCCGAAACATCAAGACCAACGAAAGCGTCGCCATTAAAGTCATCGACAAGGAGAAGATCCTCAAGGGTGGTTTAATCGCCCACATCAAACGCGAGATCTCAATCCTCCGCCGTGTTCGACACCCCAATATTGTGCAACTCTTCGAGGTCATGGCCACCAAGGCCAAGATCTACTTCGTTATGGAATATGTCCGCGGCGGCGAGCTTTTCAAGAAGGTTTCCAAGGGCCGATTGAAGGAAGAGGTTGCACGAAAGTACTTTCAGCAATTAATCTCTGCCGTTGCTTTTTGCCACGCGCGTGGTGTTTATCATCGGGACCTTAAACCGGAGAATTTGCTGCTCGATGAGAATGGGAATCTTAAGGTCTCCGATTTTGGCCTCAGCGCCGTCTCCGATCAAATTCGACAAGATGGGTTGTTTCATACTTTTTGTGGTACGCCGGCGTATGTGGCTCCGGAGGTTTTGGCCCGGAAAGGGTATGAGGCTGCGAAGGTCGATATTTGGTCATGTGGGGTTATTCTGTTTGTTCTGATGGCGGGTTATTTACCCTTCCACGACCAAAACATTATGGCAATGTATAAGAAGATTTACAAGGGGGAGTTTCGGTGTCCGAGATGGTTCTCGCCGGAGCTAATTCGACTCCTAACTCGTCTTCTAGATACAAATCCCGAAACCCGTTTCACAATTCCTGAAATCATGGAGAACAAATGGTTCAAAAAGGGGTATAAACATATCAAATTCTACATCGAAGACGATAAGGTCTGCAGCGTTGAGGACGGTAGTGATGATGTCGATTCCTTGTCGGATCAATCACAATCGGAATCGGATTCTGAAATTATTGAGACCAGAAGAAAGGTTACCTCACTCCCAAGACCCGCGAGTTTGAATGCATTTGATATAATTTCGTTTTCACCCGGATTTGATCTTTCTGGGTTGTTTGAGGATGGAGGGGAAGAGGCAAGATTTGTGTCCAGTGCTCCGGTGTCGAAGATTATATCGAAATTAGAGGAGATTGCAAAATTGGTGAGTTTTACTGTGAGGAAGAAGGATTGCAGGGTTAGTTTAGAGGGGTCACGGGAAGGAGTAAAAGGGCCATTGACAATCGCGGCCGAGGTATTCGAGTTGACCCCGAAATTGGTGATGGTGGAGGTGAAGAGGAAAGGGGGAGATAAAGCAGAGTATGAACAATTCTGTAATAATGAACTGAAGCCAGCATTGTTGAATCTGAAGATGGAAGAGTCTGCTGCTCCATCACATATACCATCAGATACTGAATGA 1404 47.51 MADRPDPDKKTETTRKDMPALLLGRYEIGKLLGHGTFAKVYHARNIKTNESVAIKVIDKEKILKGGLIAHIKREISILRRVRHPNIVQLFEVMATKAKIYFVMEYVRGGELFKKVSKGRLKEEVARKYFQQLISAVAFCHARGVYHRDLKPENLLLDENGNLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYEAAKVDIWSCGVILFVLMAGYLPFHDQNIMAMYKKIYKGEFRCPRWFSPELIRLLTRLLDTNPETRFTIPEIMENKWFKKGYKHIKFYIEDDKVCSVEDGSDDVDSLSDQSQSESDSEIIETRRKVTSLPRPASLNAFDIISFSPGFDLSGLFEDGGEEARFVSSAPVSKIISKLEEIAKLVSFTVRKKDCRVSLEGSREGVKGPLTIAAEVFELTPKLVMVEVKRKGGDKAEYEQFCNNELKPALLNLKMEESAAPSHIPSDTE 467
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 37043416 37044819 - ClCG01G023800.1 Cla01g02325 265914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g02325 467 CDD STKc_SnRK3 25 279 - -
Cla01g02325 467 Gene3D Kinase associated domain 1, KA1 334 452 - -
Cla01g02325 467 ProSiteProfiles Protein kinase domain profile. 26 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla01g02325 467 PANTHER - 19 461 - -
Cla01g02325 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Cla01g02325 467 ProSitePatterns Protein kinases ATP-binding region signature. 32 55 IPR017441 GO:0005524
Cla01g02325 467 CDD CIPK_C 338 448 - -
Cla01g02325 467 Gene3D Transferase(Phosphotransferase) domain 1 17 333 - -
Cla01g02325 467 ProSiteProfiles NAF domain profile. 332 356 IPR018451 GO:0007165
Cla01g02325 467 SUPERFAMILY Protein kinase-like (PK-like) 22 327 IPR011009 -
Cla01g02325 467 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 19 461 - -
Cla01g02325 467 SMART serkin_6 26 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla01g02325 467 Pfam Protein kinase domain 26 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla01g02325 467 Pfam NAF domain 334 390 IPR004041 GO:0007165
Cla01g02325 467 MobiDBLite consensus disorder prediction 302 322 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla01g02325 Cla03g00713 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g02325 Cla-Chr1:37043416 Cla02g01676 Cla-Chr2:31599010 0 dispersed
Cla01g02325 Cla-Chr1:37043416 Cla03g00713 Cla-Chr3:8613905 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80305 PF00069 Pkinase 2.70E-76 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g02325 - - csv:101214053 879.396