Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g02353 ATGGAGAAATCAAGTTTCTTTCTCCTTCTGCTGCTCCTCCTTCTCCTCCCTTTCATTCAACAAGCCTCTTCTTCCCACACTCACAAAAAGGCTTACATTGTTTACTTTGGAGAACACCATGGAGATAAGAGTTGGGAAGAGATAGAAGCAATTCACCATTCATATTTGATGTCTGTTAAAGAGAGTGAAGAAGATGCAAAATCCTCTCTTCTGTACAATTACAAACACTCCATCAATGCCTTTGCTGCAATTCTTACTCCTCAACAAGCCTCCAAACTTTTAGAATTGGATGAAGTGGTGTCTGTGATAGAGAGTAAAAAGTATATGATGCACACAACAAGGTCATGGGAGTTTTCAGGGGTTGAAGAAGACAAACCCACCATTAATGACTTGGTTTCTAGAGCTAACTATGGAAAGGATGTTGTGATTGGAATGCTTGACAGTGGTGTGTGGCCAAAGTCCAAAAGCTTTAGTGACAAAGGGATGGGACCCATTCCAAAATCATGGAAGGGAATCTGCCAAACAGGACCTGCCTTTCAATCTGCTCATTGTAATAGGAAGATAATTGGAGCTCGATATTACCTAAAGGGATACGAGCATCACTTTGGCCGTTTAAATGAAACGGCGGACTACCGATCACCCTGCGACAAGGACGGCCACGGATCTCACACAGCCTCCATCGCCGGCGGCCGGAGGGTATACAATGTGTCGGGCTTTGGCGGCGTCGCTTGGGGCACGGCCTCTGGCGGCGCCCCATGGGCCCGGCTTGCAATTTACAAAGTTTGTTGGGCCATTCCCAACCAAATGAAAGCTCTGGGAAACGTTTGTTTCGACACTGACATGTTGGCTGCCATGGACGACGCCATTGCCGACGGCGTCGATGTTCTCAGCTTGTCCATCGGAAAATCGGAACCGTACAATTACACGGATGACGGAATCGCCATCGGAGCTCTGCACGCCGTTAAAAAAGACATCGTTGTGTCTTGTAGCGCTGGGAATTATGGGCCTACGCCGTCGGCGTTGTCTAATGTTGCTCCGTGGATCATAACCGTTGGAGCTAGCACTGTGGATCGGGAATTTTATTCTCCGGTCATTCTCGGTAATGGATTGAAGATTAAGGTAAATCTTAATTATGTTCTTAATTCTATCTTAAATCACAAATTTTATCCCATAATGTATGCAACTAATCTCTTAATAAAAGTTCAAGTATATATAGTAAATTATAAAAGAATTTTGGTGGGTGTAATAATAATAGGGATTGTCGGTGGCTCCTTCGAAGTTGAAGAGGAAGAAGATGTATCCATTGGTGTATGCTGGAGATATAATGAAGCCTCATGTACCTCGCTATGTGTGGCAGGCTCGCTTTCACACGAGAAAGCCAAAGGAAAGATAGTGTTGTGCTTTAGAGGAGAAGGAATCAGCCGATACGCCGGCAGCCTAGAAGTTAAAAGGTCAGGCGGCGCCGGAATGATACTTGGAAACGTGCCGGCGGTAGGACGGAGGCTGCACGCCGATCCCCATTTCGTTCCGGCCACCGCCGTCTCTTACGAAGATGCAAATATGATCCTTAAATATATAAAATCTCGCGCAAATCCAACTGCAACTATTGTTCCACCTGTCACTATCTACGGCTCCAGGCCGGCGCCGGCCATGGCCAACTTCTCAAGTAGAGGTCCAAACCCCGTTGACCCTCATTTTCTTAAGTTTTCATTTATTTTAGATAAACCGGTTGAATTCTTACCAGACATAACAGCTCCGGGGGTGGACATACTAGCAGCATGGTCCGAAGAAGATTCCCCAACTAAACTTCCAAAATCCTTGGACTCTCGTATTGTCCAATACAATCTCTACTCCGGCACCTCCATGTCCTGTCCCCACGTCTCCGCCGCCGCTGCCCTCCTCCGCGCCATCCACCCTACATGGTCCCAAGCCGCCATCCGCTCCGCCCTCATGACCACCGCCACCACCAACAACAAATCCGGCCACCCCATCACCGACGACGCCACCCCCGACAACTCCCCCGCCAACCCTTTCTCCTTTGGGTCCGGCCACTTCCGCCCCTCCAAGGCGGCGGACCCCGGCCTCGTCTACGACACCAATTACACTGACTATCTCCACTACCTGTGCGGCCTCAAAATGAACTCCATTGACCCTTCCTTCACGTGCCCTCCACGTGCCCTCCCACCCCACGACCTCAATTACCCTTCCATTGCCGTCCCCCAACTCAGAGGCACCGTGAGGATCAAAAGGACCGTCACGAACGTGGGCGGCGGAGGTAAAAGTGTGTACTTCTTTTACAGCGAGGCGCCGCCGGGTGTGGCTGTGAGTGCTTCTCCTAATATACTGTATTTCAATAGAGTTGGGGAGAGGAAAAGATTTACAATTTCAGTGAGTGGGAAAGTGAAAAATAGTAATAATAATAGTAGTAATAATGGGTACTCTTTTGGTTGGTTTGCTTGGAGTGATGGGACTCACTATGTTAGAAGCCCAATTGCAGTTTCTTCTACTTAA 2511 48.27 MEKSSFFLLLLLLLLLPFIQQASSSHTHKKAYIVYFGEHHGDKSWEEIEAIHHSYLMSVKESEEDAKSSLLYNYKHSINAFAAILTPQQASKLLELDEVVSVIESKKYMMHTTRSWEFSGVEEDKPTINDLVSRANYGKDVVIGMLDSGVWPKSKSFSDKGMGPIPKSWKGICQTGPAFQSAHCNRKIIGARYYLKGYEHHFGRLNETADYRSPCDKDGHGSHTASIAGGRRVYNVSGFGGVAWGTASGGAPWARLAIYKVCWAIPNQMKALGNVCFDTDMLAAMDDAIADGVDVLSLSIGKSEPYNYTDDGIAIGALHAVKKDIVVSCSAGNYGPTPSALSNVAPWIITVGASTVDREFYSPVILGNGLKIKVNLNYVLNSILNHKFYPIMYATNLLIKVQVYIVNYKRILVGVIIIGIVGGSFEVEEEEDVSIGVCWRYNEASCTSLCVAGSLSHEKAKGKIVLCFRGEGISRYAGSLEVKRSGGAGMILGNVPAVGRRLHADPHFVPATAVSYEDANMILKYIKSRANPTATIVPPVTIYGSRPAPAMANFSSRGPNPVDPHFLKFSFILDKPVEFLPDITAPGVDILAAWSEEDSPTKLPKSLDSRIVQYNLYSGTSMSCPHVSAAAALLRAIHPTWSQAAIRSALMTTATTNNKSGHPITDDATPDNSPANPFSFGSGHFRPSKAADPGLVYDTNYTDYLHYLCGLKMNSIDPSFTCPPRALPPHDLNYPSIAVPQLRGTVRIKRTVTNVGGGGKSVYFFYSEAPPGVAVSASPNILYFNRVGERKRFTISVSGKVKNSNNNSSNNGYSFGWFAWSDGTHYVRSPIAVSST 836
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 37274403 37282538 + ClCG01G024120.2 Cla01g02353 265942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g02353 836 MobiDBLite consensus disorder prediction 657 684 - -
Cla01g02353 836 MobiDBLite consensus disorder prediction 657 679 - -
Cla01g02353 836 Pfam PA domain 449 521 IPR003137 -
Cla01g02353 836 ProSitePatterns Serine proteases, subtilase family, serine active site. 619 629 IPR023828 -
Cla01g02353 836 CDD PA_subtilisin_like 448 536 - -
Cla01g02353 836 Pfam Subtilase family 138 660 IPR000209 GO:0006508|GO:0008236
Cla01g02353 836 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 111 IPR037045 -
Cla01g02353 836 SUPERFAMILY Subtilisin-like 132 695 IPR036852 GO:0004252|GO:0006508
Cla01g02353 836 CDD Peptidases_S8_3 108 356 IPR034197 -
Cla01g02353 836 Pfam Peptidase inhibitor I9 32 109 IPR010259 -
Cla01g02353 836 ProSiteProfiles Serine proteases, subtilase domain profile. 115 691 - -
Cla01g02353 836 Gene3D - 708 836 - -
Cla01g02353 836 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 23 833 IPR045051 -
Cla01g02353 836 Pfam Fibronectin type-III domain 731 833 IPR041469 -
Cla01g02353 836 Gene3D Peptidase S8/S53 domain 544 704 IPR036852 GO:0004252|GO:0006508
Cla01g02353 836 Gene3D Peptidase S8/S53 domain 140 356 IPR036852 GO:0004252|GO:0006508
Cla01g02353 836 Gene3D - 357 397 - -
Cla01g02353 836 Gene3D - 443 543 - -
Cla01g02353 836 PRINTS Subtilisin serine protease family (S8) signature 618 634 IPR015500 -
Cla01g02353 836 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Cla01g02353 836 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.6 23 833 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g02353 Cla-Chr1:37274403 Cla10g00388 Cla-Chr10:5273841 0 dispersed
Cla01g02353 Cla-Chr1:37274403 Cla08g01611 Cla-Chr8:28719089 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g02353 - - csv:101217410 1338.17