Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla01g02375 | ATGGCGCGTGAAATGGTTTCTGGGTCCCAACAAAAAGCTTCTCTCTTCCTGATTAACTCCCATTTGAGCTCTCACTTTCTCCATTTGACTTCGAATTCATCCCTAAATATCATTGCCCTGCCTCCGTTTCATTCTGACGCCTTCTGTTTCTGCAAAACTATTGGACTCAAGGCTGCTGGTTGCATCTTGTCCTCAGAGGTCAACCATCGCTATATCTCAATGGAGAAAGAGCCTCTTCTTCCATATCTTAGCCCAAGAGGGAAACCGCCTCCTCCACTTCCTCAATTATGTCCACTCCCTGAAAACGATGAAATTACTCTGCCTATGACCCCCACGGAGCTCAAAGACCGCTTGATCTTTGGTCCTTCGTCGTCCCCACAAGACGCTTCTCCTATATTCGATGCTTTAACGCTAACTCTTTCCTCTTCCAGACCCTCTGCTTCATCTTCTCTTCAGGACCCGTCTACGCCTTTGGACCCAAAATCACAATCGCAGTCTCAACAAGCGTGGCTCGTGGATTCCAATTACACATGGCCCAAGAGCAACCTCCACCGCTCCAAAACCGCGCCTGCCATGGCGGTCATCAACGATGTCAATCATTCGCAGGAGCCCAAGCCACAATTTGGTAAACAATCTATCATCCGCCAAGCTGTTGTTCTTCTAATTATATACTTATCATTGGGCGTGGTTATCTATTGGATTAATCGTGATAAGTTTACGGCTCACGAGACTCATCCTGTGGTCGATGCATTGTACTTTTGCATTGTAACGATGTGTACTATTGGGTATGGAGATATTACCCCCAATAGTGCGGCGACGAAGCTGTTCTCAGTGTTGTTTGTGTTGGTGGGATTTGGGTTTATTGATATATTGCTCTCTGGAATGGTCAGTTATGTGCTTGATTTGCAGGAGAGTTATTTGTTAAGGAATGTAAAGAGGGGGGTGCAGCGTCAATCTGGGAAATCTTATATAATTGATGTGAAGAAGGGAAGAATGAGGATTAGAATGAAAGTGGCATTGGCCCTTGGTGTTGTGATACTTTGTATAGGAGTTGGCATGGGTGTTATGCATTTTGTTGAGAATCTGGGGTGGTTGGATTCATTTTATCTTTCAGTTATGTCTGTCACGACAGTTGGATATGGTGATCAGGCATTCAAGTCAATGACTGGTCGTATTTTTGCTTCTATCTGGTTGCTTGTATCAACCCTTGCTGTAGCTCGGGCGTTTCTTTATTTAGCAGAGGCAAGAGTAGATAAGCGGCACAGGATGATGGCAAAATGGATACTTGGTCAGGATATGACTGTTTCTGAGTTTCTTGCTGCTGATATTGACAACAATGGTTTTGTGAGGCACTAG | 1356 | 44.84 | MAREMVSGSQQKASLFLINSHLSSHFLHLTSNSSLNIIALPPFHSDAFCFCKTIGLKAAGCILSSEVNHRYISMEKEPLLPYLSPRGKPPPPLPQLCPLPENDEITLPMTPTELKDRLIFGPSSSPQDASPIFDALTLTLSSSRPSASSSLQDPSTPLDPKSQSQSQQAWLVDSNYTWPKSNLHRSKTAPAMAVINDVNHSQEPKPQFGKQSIIRQAVVLLIIYLSLGVVIYWINRDKFTAHETHPVVDALYFCIVTMCTIGYGDITPNSAATKLFSVLFVLVGFGFIDILLSGMVSYVLDLQESYLLRNVKRGVQRQSGKSYIIDVKKGRMRIRMKVALALGVVILCIGVGMGVMHFVENLGWLDSFYLSVMSVTTVGYGDQAFKSMTGRIFASIWLLVSTLAVARAFLYLAEARVDKRHRMMAKWILGQDMTVSEFLAADIDNNGFVRH | 451 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 37446543 | 37452438 | + | ClCG01G024330.1 | Cla01g02375 | 265964 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla01g02375 | 451 | PANTHER | POTASSIUM CHANNEL, SUBFAMILY K | 163 | 450 | IPR003280 | GO:0005267|GO:0016020|GO:0071805 | |
Cla01g02375 | 451 | MobiDBLite | consensus disorder prediction | 144 | 166 | - | - | |
Cla01g02375 | 451 | PRINTS | Two pore domain K+ channel signature | 376 | 385 | IPR003280 | GO:0005267|GO:0016020|GO:0071805 | |
Cla01g02375 | 451 | PRINTS | Two pore domain K+ channel signature | 256 | 284 | IPR003280 | GO:0005267|GO:0016020|GO:0071805 | |
Cla01g02375 | 451 | SUPERFAMILY | Voltage-gated potassium channels | 213 | 299 | - | - | |
Cla01g02375 | 451 | Gene3D | - | 210 | 310 | - | - | |
Cla01g02375 | 451 | Pfam | Ion channel | 220 | 299 | IPR013099 | - | |
Cla01g02375 | 451 | Pfam | Ion channel | 344 | 413 | IPR013099 | - | |
Cla01g02375 | 451 | SUPERFAMILY | Voltage-gated potassium channels | 328 | 432 | - | - | |
Cla01g02375 | 451 | Gene3D | - | 323 | 429 | - | - | |
Cla01g02375 | 451 | PANTHER | TWO-PORE POTASSIUM CHANNEL 3 | 163 | 450 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g02375 | Cla-Chr1:37446543 | Cla09g02066 | Cla-Chr9:38236836 | 5.30E-51 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla01g02375 | K05389 | - | csv:101220017 | 669.848 |