Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g02474 ATGAAAGCTAGGGTTTCTTCGTTGCCGCCGTTGTTGGCAGGAAAGCTCCAACTCAGATCCTTTTTCCCCTTCATCTTTTCCCCCAATCTCCGTCGAAACTCAATCCAATTACAGATGGTCGGAGGCTTTGAAGTGGGAGCTGTCCCCTACAACCCGGACGGTTGGGGTCCCCCGGACTCTACTGCCACTCTCGTCGCTTCCTCTAACCTCCCTCTCAATGTCCCCTTTGCCCCATTCTCTCGCTCCGATAAGCTTGGCCGGATCGCCGATTGGACCCGAACCATGAATAACCCTGGCCGCCCAAAGACTGCTTCTGATTCCGTCTTCGATTTCACGAATGACGATTCCTTCCCGGCCAATGCCGACGAGGACATGTCCTTCCGTTTGGTTGATGGAAAGCCTCCTCCGCGCCCCAAATTTGGCCCTAAATGGCGTTTCAACCAACAAAGGACGCAGCTACCTCAGCGCCGTGACGAAGAAGTTGAAGCTCGAAAGCGCGAGGCCGAGAAGGAGCGGGCTCGCCGTGACCGCCTTTACAACCTCAACAGGTCTAATGTCAATGCCCCCCGTCGTGAAGCTGCTGTTTTCAAATCCTCTGTCGAAATTCAACCCGAATGGAACATGCTTGATCAGATTCCCTTCTCCACTTTCTCCAAGCTATCCTTCTCTGTTCCTGAGCCCGAAGACCTTCTTCTGTGCGGCGGGCTAGAGTTCTATGATCGAGCATACGACCGAATCACTCCCAAGAACGAGCGCCGCCTTGAGCGCTTCAAGAACCGCAACTTCTTCAAGGTAACTACTACTGACGATCCTGTCATTCGTCGTCTAGCAAATGAGGACAAAGCCACAGTTTTTGCTACCGATGCCATCCTTTCTACCCTTATGTGTGCAACTAGATCGGTTTACTCCTGGGATATTGTGGTTCAGCGTGTTGGGAATAAACTTTTCTTCGATAAGAGGGATGGGTCGCAACTTGATTTGCTTGCCGTCCATGAGACCTCTCAGGAACCTTTACCTGAGGCGAAGGACGATATCAATTCCGCTTACTCACTCAGTGTTGAAGCTGCTTACATTAATCAGAACTTCTCGCAGCAAGTTTTAGTTAGGGATGGAAATAAGGTGGCGTTTGACGAGCCAAACCCATTTGCAAATGAGGGTGAGGAGGTTGCTTCTGTTGCTTATAGGTATAGGAGGTGGAAACTCGATGATGACATGTATCTTGTAGCGAGGTGTGAGGTTCAAAGTGTTATGGAGGTTAATAAGCAAAGATCATTCTTGACTTTGAACGCTCTTAATGAATTTGATCCCAAGTATTCTGGTGTTGATTGGAGGCAGAAATTGGAGACACAGAGGGGTGCTGTTTTGGCCACTGAGTTGAAGAACAATGCTAATAAATTGGCAAAATGGACAGCTCAAGCCCTGTTGGCTAGCGCAGACATGATGAAGTTGGGATATGTCTCTAGGGTTCATCCTCGCGATCACTTTAACCATGTCATCTTAGCTGTGGTTGGATACAAACCTAAGGATTTTGCAGGTCAAATTAACTTGAATACGTCTAACATGTGGGGTATTGTTAAATCTATCGTGGATTTGTGCATGAAATTGAATGAAGGTAAGTACGTTTTGGTCAAGGATCCATCGAAACCACAGGTTAGGATCTATGAGGTTCCTGCAGATGCATTTGAGAATGATTATGTTGAGGAGCCACTCGCTGAGGAGGATCAAGTGCAACCACCAGCCGAAGATGAAAATGGTGTCACTCCTAATGCGGGGACGGATGATGCAGAAGAGAAGGTTGATGCTGCTCAAGCTTAA 1815 48.37 MKARVSSLPPLLAGKLQLRSFFPFIFSPNLRRNSIQLQMVGGFEVGAVPYNPDGWGPPDSTATLVASSNLPLNVPFAPFSRSDKLGRIADWTRTMNNPGRPKTASDSVFDFTNDDSFPANADEDMSFRLVDGKPPPRPKFGPKWRFNQQRTQLPQRRDEEVEARKREAEKERARRDRLYNLNRSNVNAPRREAAVFKSSVEIQPEWNMLDQIPFSTFSKLSFSVPEPEDLLLCGGLEFYDRAYDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDKATVFATDAILSTLMCATRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLAVHETSQEPLPEAKDDINSAYSLSVEAAYINQNFSQQVLVRDGNKVAFDEPNPFANEGEEVASVAYRYRRWKLDDDMYLVARCEVQSVMEVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADMMKLGYVSRVHPRDHFNHVILAVVGYKPKDFAGQINLNTSNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLAEEDQVQPPAEDENGVTPNAGTDDAEEKVDAAQA 604
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 38400186 38402179 + ClCG01G025340.2 Cla01g02474 266063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g02474 604 Hamap Eukaryotic translation initiation factor 3 subunit D [EIF3D]. 41 567 IPR007783 GO:0003743|GO:0005737|GO:0005852
Cla01g02474 604 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT D 42 597 - -
Cla01g02474 604 Coils Coil 156 176 - -
Cla01g02474 604 PIRSF Transl_init_eIF3d 38 585 IPR007783 GO:0003743|GO:0005737|GO:0005852
Cla01g02474 604 MobiDBLite consensus disorder prediction 565 604 - -
Cla01g02474 604 MobiDBLite consensus disorder prediction 126 172 - -
Cla01g02474 604 MobiDBLite consensus disorder prediction 152 172 - -
Cla01g02474 604 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 42 597 IPR007783 GO:0003743|GO:0005737|GO:0005852
Cla01g02474 604 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 44 555 IPR007783 GO:0003743|GO:0005737|GO:0005852
Cla01g02474 604 MobiDBLite consensus disorder prediction 565 579 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g02474 K03251 - csv:101208923 1109.36