Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g02485 ATGGATATTATTTACTGTGCACGTCTACTATGTGTTGTTGTCTGTTTTGGGATGTTTCTATGCGCATCTTGTCTTGACGAATTCGGTGATTCAACAGCTGTTTACATTGTAACTCTCAAGGAACCTCCTTCCACTACTCATTACTATGGTCAGCTTAGACAAAATACCACTTCTTTTAGGCTTAATACTTCTGGTGGATTAAGCATCCACAAACCAAGAAACATATCGAGAAAGCATCGAAGATATAGATCTTACATAGCCCGAGTTCATGATTCATTGTTGAAGAAGGTCTTGAAGGGGGAAAAATATCTAAAGCTGTACAGTTACCATTTCTTGATCAATGGATTTGCTGTGCTTGTTACCGAAGAACAGGCAAGTAAACTTTCAAAGAGGATAGAGGTGGCAAATGTTGTCATGGATTTCTCTGTTAGAACTGCTACGACCCACACTCCACAGTTCTTGGGCCTACCGCAGGGAGCTTGGTCTCAAGATGGTGGCTTTGAGTCTGCTGGAGCTGGGATTGTGATAGGGTTCATTGACACTGGCATTGATCCTTCGCACCCCAGCTTTGCTGATGATTTGACTGATAATCCGTTTCCCATTCCGGCTCACTTCTCTGGAATCTGTGAGGTAACTCCAGATTTTCCATCTGGATCTTGCAATCGGAAGCTTGTGGGAGCACGCCATTTTGCAGCATCAGCTATAACAAGGGGAATATTTAATGCATCTCAGGATTATGCATCGCCATTTGATGGTGATGGACATGGCACGCACACAGCTTCAATTGCTGCTGGAAACCATGGCATTCCAGTCATAGTTGCTGGACATCACTTTGGAAATGCCAGTGGGATGGCTCCTCGTTCACACATTGCTGTTTACAAGGCACTGTACAAAAGTTTTGGAGGTTTTGCTGCTGATGTTGTTGCTGCAGTTGATCAGGCTGCTCAGGATGGAGTGGATATAATAAGTTTATCAATCACACCGAATCGGCGTCCCCCTGGTATTGCAACATTTTTTAATCCCATAGATATGGCACTGCTCTCTGCTGTAAAGGCTGGTATATTCGTTGTGCAAGCAGCTGGCAATACTGGACCAGCACCAAAGAGCATGTCTTCCTTCAGTCCATGGATCTTTACTGTTGGTGCTGCTTCTCACGATAGAAGCTATGCTAACTCTATACACCTTGGCAATAATGTCACCATCCCGGGGGTCGGTCTTGCACCTGGAACCTATAATGACACAAAGTACAAACTAGTTGCTGCAATACATGCACTGAACAATGACACAAACGTGTCAGAGGACATGTATGTGGGCGAATGCCAAGACTCCAGTAACTTTGATCAGGATCTGGTCCAAGGGAACCTTCTAATATGCAGCTACTCAATCAGATTTGTGCTAGGGCTTTCAACGGTTAAACAGGCTTTACAGACGGCGAAAAACTTGAGTGCTGCTGGTGTCATTTTCTATATGGATTCTTTTGTGATAGGTTTTAGGCTCAACCCAATTCCAATGAAAATGCCCGGCATCATAATTTCATCACCAGAAGATTCCAAGATGCTTCTTCAATACTACAATTCTTCTTTGGAAGTAGATGGATTAACAAAGAAAATTTCTAAATTTGGAGCTGTTGCCAGCATATGTGGAGGATTGAAGGCAAATTATAGCTCTTCTGCCCCACAAATTATGTACTACTCTGCTAGAGGACCAGATCCAGAAGACAGTTCTCTTGATGATTCTGATATTATGAAGCCTAACTTGGTAGCTCCTGGAAATTCCATATGGGCTGCTTGGAGCTCTGTTGCCACTGACTCTATTGAATTTCTTGGTGAAAACTTTGCAATGATGTCGGGAACGAGCATGGCTGCTCCTCATATTGCAGGCCTAGCCTCACTCATAAAGCAGAAGTATCCTAGTCTTAGTCCTTCAGCCATTGCATCTGCACTATCGACAACAGCTTCTCTTTACAACAAGACTGGTGGACCGATCATGGCGCAGCGTGCTTATGCTAACCCTGAACAGAACCAGTCTCCAGCTACGCCTTTCGATATGGGAAGTGGTTTTGTGAATGCAACAGCAGCTCTCAACCCAGGGTTGATATTTGATTCTAGTTACGATGATTATATGTCTTTTCTTTGTGGTATCAACGGATCATCTCCTGTGGTATTCAACTACACAGGCCAGAACTGTGGGCTATACAATTCTAGCATTACTGGAGCTGATTTGAACTTGCCCTCTGTGACGATAGCAAAACTTAACCAGTCGAGAGTAGTGCAACGAACCGTGACCAACATTGCTGGACCTGAGTTTTATAGTGTTGGTTGGAGTGCTCCTTATGGGATTTCTTTGAAGGTTTCTCCAACTCGATTTACAATCGGCAGTGGCGAGAAACAAGAGCTAACCATATTCTTCAACTCCACGATGAACAGCTCGGTTGCTAGCTTTGGTAGAATTGGACTTTTTGGGAGTGCAGGCCATATAATCAACATTCCTCTTTCGGTGATTTTGAAGATCTCATATAACAATACTACTAATTGA 2535 43.55 MDIIYCARLLCVVVCFGMFLCASCLDEFGDSTAVYIVTLKEPPSTTHYYGQLRQNTTSFRLNTSGGLSIHKPRNISRKHRRYRSYIARVHDSLLKKVLKGEKYLKLYSYHFLINGFAVLVTEEQASKLSKRIEVANVVMDFSVRTATTHTPQFLGLPQGAWSQDGGFESAGAGIVIGFIDTGIDPSHPSFADDLTDNPFPIPAHFSGICEVTPDFPSGSCNRKLVGARHFAASAITRGIFNASQDYASPFDGDGHGTHTASIAAGNHGIPVIVAGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAVDQAAQDGVDIISLSITPNRRPPGIATFFNPIDMALLSAVKAGIFVVQAAGNTGPAPKSMSSFSPWIFTVGAASHDRSYANSIHLGNNVTIPGVGLAPGTYNDTKYKLVAAIHALNNDTNVSEDMYVGECQDSSNFDQDLVQGNLLICSYSIRFVLGLSTVKQALQTAKNLSAAGVIFYMDSFVIGFRLNPIPMKMPGIIISSPEDSKMLLQYYNSSLEVDGLTKKISKFGAVASICGGLKANYSSSAPQIMYYSARGPDPEDSSLDDSDIMKPNLVAPGNSIWAAWSSVATDSIEFLGENFAMMSGTSMAAPHIAGLASLIKQKYPSLSPSAIASALSTTASLYNKTGGPIMAQRAYANPEQNQSPATPFDMGSGFVNATAALNPGLIFDSSYDDYMSFLCGINGSSPVVFNYTGQNCGLYNSSITGADLNLPSVTIAKLNQSRVVQRTVTNIAGPEFYSVGWSAPYGISLKVSPTRFTIGSGEKQELTIFFNSTMNSSVASFGRIGLFGSAGHIINIPLSVILKISYNNTTN 844
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 38499272 38505587 + ClCG01G025440.1 Cla01g02485 266074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g02485 844 CDD PA_subtilisin_like 392 527 - -
Cla01g02485 844 CDD Peptidases_S8_3 146 653 IPR034197 -
Cla01g02485 844 ProSiteProfiles Serine proteases, subtilase domain profile. 151 694 - -
Cla01g02485 844 ProSitePatterns Serine proteases, subtilase family, serine active site. 617 627 IPR023828 -
Cla01g02485 844 Gene3D - 711 835 - -
Cla01g02485 844 Gene3D - 386 554 - -
Cla01g02485 844 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 144 IPR037045 -
Cla01g02485 844 Pfam Fibronectin type-III domain 740 833 IPR041469 -
Cla01g02485 844 PRINTS Subtilisin serine protease family (S8) signature 171 190 IPR015500 -
Cla01g02485 844 PRINTS Subtilisin serine protease family (S8) signature 251 264 IPR015500 -
Cla01g02485 844 PRINTS Subtilisin serine protease family (S8) signature 616 632 IPR015500 -
Cla01g02485 844 SUPERFAMILY Subtilisin-like 146 698 IPR036852 GO:0004252|GO:0006508
Cla01g02485 844 Pfam Subtilase family 171 664 IPR000209 GO:0006508|GO:0008236
Cla01g02485 844 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 176 187 IPR023827 -
Cla01g02485 844 Pfam Peptidase inhibitor I9 34 146 IPR010259 -
Cla01g02485 844 Gene3D Peptidase S8/S53 domain 173 707 IPR036852 GO:0004252|GO:0006508
Cla01g02485 844 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 20 837 - -
Cla01g02485 844 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 20 837 IPR045051 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g00962 Cla-Chr1:13761077 Cla01g02485 Cla-Chr1:38499272 0 dispersed
Cla01g02485 Cla-Chr1:38499272 Cla11g01151 Cla-Chr11:24062722 0 dispersed
Cla01g02485 Cla-Chr1:38499272 Cla09g00096 Cla-Chr9:943443 2.17E-93 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g02485 - - bhj:120074717 1615.13