Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla01g02498 | ATGGCGCCGGGCCTCAGAGACCTCCAGCTCGCCCAGGTCGCCGCCGCAGACCGTCGCCCGCCAGATATTTCTGCGGCTGATGAAATTCCCGATGACCTTGAGGATGTGCGTTTGCTTGATTCCTATGAGAGGCAGGATGAGAATTTGGCCAAAATTGGGGATGGTATGAGGAGGGTTCAGGTCACAGTTTCTGGGATGACCTGCGCTGCTTGTTCTAATTCCGTGGAGGCCGCTCTGAGGGGCGTTAATGGCGTTTTGATGGCTTCTGTTGCATTGCTTCAGAACAGAGCTGACGTAGTTTTTGACCCCAACTTGATTAAGGAGGAAGACATCAAGGAAGCAATAGAAGATGCTGGATTTGAGGCTGAGATTATACCTGAAACCACTTCAGTTGGAAAGAAGCCGCATGGAACACTGGTGGGTCAATTTACCATAGGCGGTATGACATGTGCAGCATGTGTGAATTCGGTAGAAGGAATTTTAAAAGATCTTCCTGGTGTTAGAAGAGCAGTAGTTGCTTTAGCCACATCATTGGGAGAAGTTGAATATGATCCTACAATAACCAGTAAAGACGATATAGTTAACGCAATTGAGGATGCTGGATTTGAAGCTTCATTTGTACAGAGCAGCGAACAAGATAAAATTTTACTAGCAGTTGCAGGCATTGCTGGCGAGGTTGATGTACATTTTTTGGAAGTCATACTTAGCAACTTGAAAGGGGTGAAACGGTTTCTCTTTGACAGTACATCAGGAAAACTTGAAATTATTTTTGACCCAGAAGTTGTTGGTCCCAGATCCTTAGTGGATGAGATTGAGGGAAGAAGCAACAGAAAATTTAAACTGCATGTTACGAGCCCTTACACAAGGTTAACATCTAAAGATGTTGAAGAGGCTAATAACATGTTTCGGCTTTTTATCTCCAGTCTGTCTCTCAGTGTACTCATCTTTCTCCAACGAGTAATATGTCCTCATATTCCTTTAATCTACTCATTGCTACTCTGGCGCTGTGGGCCCTTCCTCATGGATGATTGGTTAAAGTGGGCATTAGTGACTGTTGTACAATTTATTATTGGAAAGCGCTTTTACATTGCAGCTGCTAGAGCTCTTCGAAATGGTTCAACAAACATGGATGTCTTGGTTGCTTTGGGTACCACGGCCTCTTACGTCTATTCTGTTTGTGCACTTCTCTATGGTGCAATAACTGGATTTTGGTCTCCTACTTATTTTGAAACAAGTGCTATGTTAATAACCTTTGTATTATTGGGAAAGTATTTGGAGTGTCTTGCCAAGGGGAAAACATCAGATGCCATCAAGAAGTTGGTAGAACTTGCTCCTGCAACTGCTTTATTGCTTATCCGAGATAAAGGTGGGAATTTGATAGAAGAAAGGGAAATCGATGCTCTGTTAATTCAACCTGGTGATGTGTTGAAGGTTCTTCCTGGTACAAAGATTCCAGCGGATGGTGTTGTTGTTTGGGGTTCAAGTTATGTTAATGAGAGTATGGTTACAGGAGAATCTATACCTGTTTTAAAGGAGGTTAACTCGCACGTTATTGGAGGTACAATTAATTTTCATGGAGCTCTTCACATTCAAGCAACAAAAGTAGGATCTGATGCAGTTTTGAACCAGATTATTAGTTTGGTTGAGACAGCTCAGATGTCTAAAGCTCCCATTCAGAAATTTGCTGACTTTGTGGCAAGCATATTTGTTCCAACCGTCGTAGCTATGGCATTGTGTACGTTATTTGGTTGGTACGTTGGAGGAATTCTTGGGGCTTATCCTGCTGAATGGCTCCCAGAAAATGGAAATTACTTTGTATTTTCCCTTATGTTTGCCATAGCAGTGGTAGTTATTGCATGTCCTTGTGCACTAGGCTTGGCCACACCAACTGCTGTCATGGTTGCTACTGGGGTTGGTGCGAGCAATGGTGTCTTGATTAAAGGAGGAGATGCTTTGGAGAGGGCCCAAAAGGTTAAGTACGTGATTTTTGATAAAACAGGCACACTAACCCAAGGGAAAGCAACCGTTACTACCGCCAAAGTATTCACTGAAATTTCTCGAGGAGATTTTCTTAAGTTGGTTGCTTCAGCAGAGGCTAGCAGTGAACACCCATTAGGAAAAGCTATAGTTGAGTATGCACGTCATTTCCATTTCTTTGATGAGCCTTCTGCGACCAAAAATGTGGAAAATCAAAGTAAAGAATCTTCTGGATGGCTTTATGATGCCACAGATTTCTCTGCATTGCCAGGCCAAGGCATCCAGTGCATTATTGAGGGAAAAAGGATTCTGGTTGGCAACAGGAAGTTGATGAATGAAAGTGGAATCTTCATAGCACCTCATGTTGATAATTTCGTTATAGAGCTTGAAGAAAGTGCAAAGACAGGCATTCTTGTTGCATGTGATGACAACTTAATTGGAGTTGTCGGAATAGCAGATCCACTGAAGCGAGAAGCTGCAGTTGTTGTAGAGGGTCTTGTAAAAATGGGAGTTTCTCCAGTGATGGTTACAGGGGATAATTGGAGAACGGCTCGAGCTGTCGCCAAAGAGCTTGGTATACAAGATGTGAGAGCAGAAGTAATGCCAGCAGGAAAGGCCGAAGTCATTCAAAACTTCCAAAAGGATGGAAGCACAGTTGCAATGGTAGGTGATGGTATCAATGACTCGCCTGCTCTAGCTGCTTCTGATATTGGAATTGCAATCGGTGCGGGAACTGATATTGCCATTGAGGCAGCCGACTTTGTCCTGATGAGAAATAATTTAGAAGATGTAATTACAGCCATTGATCTCTCAAGGAAGACTTTCAATCGGATTCGATTAAATTACGTGTTTGCAATGGCCTACAATGTAATAGCTATTCCTATCGCTGCTGGAGTTTTCTTTCCTTCTTTGGGGGTTAAATTGCCTCCATGGGCAGCTGGTGCATGCATGGCTTTATCGTCCGTAAGTGTCGTTTGCTCTTCTTTACTTCTTAGGAGATACAAAAGACCAAGACTTACGACAATACTCGAAATAACTGTAGAATAG | 3024 | 42.96 | MAPGLRDLQLAQVAAADRRPPDISAADEIPDDLEDVRLLDSYERQDENLAKIGDGMRRVQVTVSGMTCAACSNSVEAALRGVNGVLMASVALLQNRADVVFDPNLIKEEDIKEAIEDAGFEAEIIPETTSVGKKPHGTLVGQFTIGGMTCAACVNSVEGILKDLPGVRRAVVALATSLGEVEYDPTITSKDDIVNAIEDAGFEASFVQSSEQDKILLAVAGIAGEVDVHFLEVILSNLKGVKRFLFDSTSGKLEIIFDPEVVGPRSLVDEIEGRSNRKFKLHVTSPYTRLTSKDVEEANNMFRLFISSLSLSVLIFLQRVICPHIPLIYSLLLWRCGPFLMDDWLKWALVTVVQFIIGKRFYIAAARALRNGSTNMDVLVALGTTASYVYSVCALLYGAITGFWSPTYFETSAMLITFVLLGKYLECLAKGKTSDAIKKLVELAPATALLLIRDKGGNLIEEREIDALLIQPGDVLKVLPGTKIPADGVVVWGSSYVNESMVTGESIPVLKEVNSHVIGGTINFHGALHIQATKVGSDAVLNQIISLVETAQMSKAPIQKFADFVASIFVPTVVAMALCTLFGWYVGGILGAYPAEWLPENGNYFVFSLMFAIAVVVIACPCALGLATPTAVMVATGVGASNGVLIKGGDALERAQKVKYVIFDKTGTLTQGKATVTTAKVFTEISRGDFLKLVASAEASSEHPLGKAIVEYARHFHFFDEPSATKNVENQSKESSGWLYDATDFSALPGQGIQCIIEGKRILVGNRKLMNESGIFIAPHVDNFVIELEESAKTGILVACDDNLIGVVGIADPLKREAAVVVEGLVKMGVSPVMVTGDNWRTARAVAKELGIQDVRAEVMPAGKAEVIQNFQKDGSTVAMVGDGINDSPALAASDIGIAIGAGTDIAIEAADFVLMRNNLEDVITAIDLSRKTFNRIRLNYVFAMAYNVIAIPIAAGVFFPSLGVKLPPWAAGACMALSSVSVVCSSLLLRRYKRPRLTTILEITVE | 1007 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 38644565 | 38655676 | - | ClCG01G025580.1 | Cla01g02498 | 266087 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla01g02498 | 1007 | Gene3D | - | 56 | 128 | - | - | |
Cla01g02498 | 1007 | Pfam | E1-E2 ATPase | 443 | 640 | - | - | |
Cla01g02498 | 1007 | CDD | HMA | 142 | 205 | IPR006121 | GO:0046872 | |
Cla01g02498 | 1007 | Gene3D | - | 629 | 938 | IPR023214 | - | |
Cla01g02498 | 1007 | CDD | P-type_ATPase_Cu-like | 303 | 977 | - | - | |
Cla01g02498 | 1007 | ProSitePatterns | Heavy-metal-associated domain. | 63 | 93 | IPR017969 | GO:0046872 | |
Cla01g02498 | 1007 | ProSitePatterns | Heavy-metal-associated domain. | 145 | 174 | IPR017969 | GO:0046872 | |
Cla01g02498 | 1007 | Gene3D | - | 762 | 812 | IPR023299 | GO:0000166 | |
Cla01g02498 | 1007 | Gene3D | - | 669 | 761 | IPR023299 | GO:0000166 | |
Cla01g02498 | 1007 | Gene3D | - | 141 | 206 | - | - | |
Cla01g02498 | 1007 | SFLD | Haloacid Dehalogenase | 644 | 933 | - | - | |
Cla01g02498 | 1007 | SUPERFAMILY | HMA, heavy metal-associated domain | 138 | 210 | IPR036163 | GO:0046872 | |
Cla01g02498 | 1007 | TIGRFAM | ATPase-IB_hvy: heavy metal translocating P-type ATPase | 376 | 990 | IPR027256 | GO:0006812|GO:0016021|GO:0019829 | |
Cla01g02498 | 1007 | ProSiteProfiles | Heavy-metal-associated domain profile. | 214 | 272 | IPR006121 | GO:0046872 | |
Cla01g02498 | 1007 | Pfam | Heavy-metal-associated domain | 143 | 203 | IPR006121 | GO:0046872 | |
Cla01g02498 | 1007 | Pfam | Heavy-metal-associated domain | 61 | 121 | IPR006121 | GO:0046872 | |
Cla01g02498 | 1007 | PANTHER | HEAVY METAL P-TYPE ATPASE | 25 | 1000 | - | - | |
Cla01g02498 | 1007 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 751 | 962 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cla01g02498 | 1007 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 415 | 691 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cla01g02498 | 1007 | Gene3D | - | 430 | 552 | - | - | |
Cla01g02498 | 1007 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 399 | 969 | IPR023298 | - | |
Cla01g02498 | 1007 | TIGRFAM | TIGR00003: copper ion binding protein | 59 | 122 | IPR006122 | GO:0005507 | |
Cla01g02498 | 1007 | TIGRFAM | TIGR00003: copper ion binding protein | 142 | 204 | IPR006122 | GO:0005507 | |
Cla01g02498 | 1007 | ProSiteProfiles | Heavy-metal-associated domain profile. | 58 | 124 | IPR006121 | GO:0046872 | |
Cla01g02498 | 1007 | SUPERFAMILY | HMA, heavy metal-associated domain | 53 | 126 | IPR036163 | GO:0046872 | |
Cla01g02498 | 1007 | CDD | HMA | 60 | 123 | IPR006121 | GO:0046872 | |
Cla01g02498 | 1007 | SUPERFAMILY | HAD-like | 661 | 987 | IPR036412 | - | |
Cla01g02498 | 1007 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 664 | 670 | IPR018303 | - | |
Cla01g02498 | 1007 | ProSiteProfiles | Heavy-metal-associated domain profile. | 140 | 206 | IPR006121 | GO:0046872 | |
Cla01g02498 | 1007 | PRINTS | P-type cation-transporting ATPase superfamily signature | 498 | 512 | - | - | |
Cla01g02498 | 1007 | PRINTS | P-type cation-transporting ATPase superfamily signature | 662 | 676 | - | - | |
Cla01g02498 | 1007 | PRINTS | P-type cation-transporting ATPase superfamily signature | 806 | 817 | - | - | |
Cla01g02498 | 1007 | PRINTS | P-type cation-transporting ATPase superfamily signature | 828 | 838 | - | - | |
Cla01g02498 | 1007 | PRINTS | P-type cation-transporting ATPase superfamily signature | 881 | 900 | - | - | |
Cla01g02498 | 1007 | PRINTS | P-type cation-transporting ATPase superfamily signature | 904 | 916 | - | - | |
Cla01g02498 | 1007 | SFLD | p-type atpase | 644 | 933 | IPR044492 | - | |
Cla01g02498 | 1007 | Pfam | haloacid dehalogenase-like hydrolase | 658 | 895 | - | - | |
Cla01g02498 | 1007 | SUPERFAMILY | Calcium ATPase, transduction domain A | 462 | 548 | IPR008250 | - | |
Cla01g02498 | 1007 | PRINTS | H+-transporting ATPase (proton pump) signature | 853 | 869 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cla01g02498 | 1007 | PRINTS | H+-transporting ATPase (proton pump) signature | 881 | 897 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cla01g02498 | 1007 | PRINTS | H+-transporting ATPase (proton pump) signature | 912 | 937 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cla01g02498 | 1007 | PANTHER | ATP7, ISOFORM B | 25 | 1000 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g02498 | Cla-Chr1:38644565 | Cla04g00465 | Cla-Chr4:17517724 | 1.60E-15 | dispersed | |
Cla01g02498 | Cla-Chr1:38644565 | Cla11g01161 | Cla-Chr11:24336026 | 2.40E-81 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla01g02498 | K17686 | - | csv:101205642 | 1842.78 |