Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g00033 ATGGATGGAAGAGGGAATATTGTTCATGAACCTCCAAATGCAAAGTTTGAATTCACTCCAACATGGATCATTGCTGTTGTTTCATCTATTATTGTTATCATTTCCTTCTCTGTTGAGCGTGGCCTTCATCGCCTTGGACAGTTATTGAAACGTAAAAAGCAGGATGAATTGAATCACGCATTGCTGAAATTAAAGGAAGAGTTGATGATTTTAGGGTTTATCTCCCTATTATTGAATGTGTTTCAAGGGGCAATTGGACGTTTTTGTATGCCCAAAGATTTTGCAAACCATATGCTTCCATGCAAGAGACCTGTATCCACTGTAAACCATTTTTCATCGCCAAATTTCATTGACGATTATAATATTCATCGTCATCTATTATCATCGCAAACTAATTTTCAACATTGTTCACGAAAAGGAAAAGTTCCTCTATTGTCCTTGGAAGCTTTGCATCAGCTGCATATTTTCATATTTGTGTTGGCTGTTGTTCATGTCATCTTCTGTGCTACAACCATGCTTCTAGCTTCTGCAAAGATAAGATTGTGGAAGAGGTGGGAGGATTCTATTTATCGGGGAACTACAATATCTCAAGATGATAATGAGTTTAAAGAACGTGCCGAAGGATTTTGGAAAAATGCTGCTGTCGTAGCTTGGATGGTTGCATTTGCGAAGCAATTTCATGGATCAATCACAAAGTCCGATTACATTTATCTTCGACGAGGCTTTATTAAGAAACATTGCCCTGGGGAACCTAATTTTAATTTCTATGACCACATTACAAAGACATATCAACATGATTTCAAGAAAGTTGTTGGTATAAGTTGGTACCTTTGGGCCTTTGTTGTGCTCTTCTTGCTGCTTAATCTTGAAGGATGGCACACTTATTTTTGGATGTCGTTTCTACCACTAATTATGCTACTTCTAGTTGGGGCAAAGTTGGAATACGTAATAACACGTATGGCTCAAGAATTAAACTCGAGAATAGAAGACAAAGAAGCACAACAAGAACAAGTACATGACAACATTAATAGATTTCATAGACAACATAAGGAAATCAAAAGACATGGTAGCCGCCATGTAGTGAATCCCTCAGACGAACACTTTTGGTTTGGTCGTCCTTCTCTTGTTCTTGTCTTGATTCATTTCATTCTGTTTCAAAATTCCTTCGAGATTGCCTTCTTCTTTTGGATTTGGACGACTTATGGATTTAAGTCATGCATTATGGACAAACCTGCGTTCATCATCACTAGACTCATCTTGGGTGGCATTGTTCAAGTGCTATGCAGTTATAGCACATTGCCTTTGTATTCTTTAGTCACTCAGATGGGAAGCGAATATAAGAAGCCAATGGAAGAAGATCAAATGTCAGAGGGTGGAGATCACCAAGTGCAAGAAAGAAGCAGCTGA 1407 38.17 MDGRGNIVHEPPNAKFEFTPTWIIAVVSSIIVIISFSVERGLHRLGQLLKRKKQDELNHALLKLKEELMILGFISLLLNVFQGAIGRFCMPKDFANHMLPCKRPVSTVNHFSSPNFIDDYNIHRHLLSSQTNFQHCSRKGKVPLLSLEALHQLHIFIFVLAVVHVIFCATTMLLASAKIRLWKRWEDSIYRGTTISQDDNEFKERAEGFWKNAAVVAWMVAFAKQFHGSITKSDYIYLRRGFIKKHCPGEPNFNFYDHITKTYQHDFKKVVGISWYLWAFVVLFLLLNLEGWHTYFWMSFLPLIMLLLVGAKLEYVITRMAQELNSRIEDKEAQQEQVHDNINRFHRQHKEIKRHGSRHVVNPSDEHFWFGRPSLVLVLIHFILFQNSFEIAFFFWIWTTYGFKSCIMDKPAFIITRLILGGIVQVLCSYSTLPLYSLVTQMGSEYKKPMEEDQMSEGGDHQVQERSS 468
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 395408 404502 - ClCG02G000300.2 Cla02g00033 266159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g00033 468 PANTHER MLO-LIKE PROTEIN 1 15 461 IPR004326 GO:0006952|GO:0016021
Cla02g00033 468 Coils Coil 321 341 - -
Cla02g00033 468 MobiDBLite consensus disorder prediction 449 468 - -
Cla02g00033 468 Pfam Mlo family 15 456 IPR004326 GO:0006952|GO:0016021
Cla02g00033 468 PANTHER MLO-LIKE PROTEIN 13 15 461 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00033 Cla-Chr2:395408 Cla06g00048 Cla-Chr6:532740 7.62E-147 dispersed
Cla02g00031 Cla-Chr2:388756 Cla02g00033 Cla-Chr2:395408 2.75E-12 proximal
Cla02g00032 Cla-Chr2:390894 Cla02g00033 Cla-Chr2:395408 3.54E-35 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g00033 K08472 K01179 csv:101216903 750.355