Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g00037 AGAATAGAGAGTATTACTTCTCCCCATCGCTCTGTGCTGCTGGAAAACTTCGACTGCCGGCTTACTAACTCGATTTCTTCCTCTTCTGTTTGTCAACTCAAGACTGAAAATCTTGCGTCGCCGGTCGCAGCTTCTCGCTTGAAGCTTTACTCGTACTGGAGGAGCTCTTGTTCTCACCGTGTTCGAATTGCCCTAAACTTGAAAGGTCTAAATTTCGAGTACAAAGCTGTTAACCTACTGAAGGGAGAGCAATTCACTCCCGAGTATGAGAAGCTCAATCCTATTGGTTATGTACCCACTCTTGTGGATGGGGATGTTGTTATTGCCGACTCTTTTGCTATATTAATGTATTTGGAGGAGAAGTACCCTCAGCATCCTCTGTTGCCTCGTGATCTTAGTAAAAGAGCTATTAATTACCAGGCTGCAAACATCGTTTCTTCTAGCATACAGCCTCTTCAAAATCTAGCTGTTCTGAAGTACATTGAGGAAAAATCTGGTCCAGAAGAGAAACTTCGTTGGGTTCAACATCACATTGAAAAAGGTTTTACAGCACTCGAAAAGCTGCTGAAAGTTCATGCTGGGAAATATGCTACTGGAGACGAAATCTATCTGGCGGACTTGTTTTTGGCTCCCCAAATTCATGGCGCCATCAATAGATTCAGTGTTGACATGTCCAAATTTCCTCTTTTATGCAGGTTGAATGAGGAATACAACGCTATAGCAGCATTTCAAGATGCAGCGCCAGCAAACCAGCCTGATGCTACTCAAACCTCTACTTAA 780 43.33 RIESITSPHRSVLLENFDCRLTNSISSSSVCQLKTENLASPVAASRLKLYSYWRSSCSHRVRIALNLKGLNFEYKAVNLLKGEQFTPEYEKLNPIGYVPTLVDGDVVIADSFAILMYLEEKYPQHPLLPRDLSKRAINYQAANIVSSSIQPLQNLAVLKYIEEKSGPEEKLRWVQHHIEKGFTALEKLLKVHAGKYATGDEIYLADLFLAPQIHGAINRFSVDMSKFPLLCRLNEEYNAIAAFQDAAPANQPDATQTST 259
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 424156 432112 + ClCG02G000340.1 Cla02g00037 266163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g00037 259 Gene3D - 130 257 - -
Cla02g00037 259 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 131 256 IPR010987 -
Cla02g00037 259 Pfam Glutathione S-transferase, C-terminal domain 160 239 IPR004046 -
Cla02g00037 259 SFLD Glutathione Transferase (cytosolic) 47 229 IPR040079 -
Cla02g00037 259 SUPERFAMILY GST C-terminal domain-like 126 254 IPR036282 -
Cla02g00037 259 Pfam Glutathione S-transferase, N-terminal domain 49 125 IPR004045 -
Cla02g00037 259 TIGRFAM maiA: maleylacetoacetate isomerase 48 254 IPR005955 GO:0003824|GO:0005737|GO:0009072
Cla02g00037 259 SFLD Main (cytGST) 47 229 - -
Cla02g00037 259 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 45 126 IPR004045 -
Cla02g00037 259 Gene3D Glutaredoxin 44 129 - -
Cla02g00037 259 CDD GST_N_Zeta 47 119 IPR034333 -
Cla02g00037 259 PANTHER MALEYLACETOACETATE ISOMERASE 41 255 - -
Cla02g00037 259 CDD GST_C_Zeta 134 251 IPR034330 -
Cla02g00037 259 PANTHER GLUTATHIONE S-TRANSFERASE 2-LIKE ISOFORM X1 41 255 - -
Cla02g00037 259 SUPERFAMILY Thioredoxin-like 42 130 IPR036249 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00037 Cla-Chr2:424156 Cla05g00238 Cla-Chr5:2155011 8.85E-83 dispersed
Cla02g00034 Cla-Chr2:404842 Cla02g00037 Cla-Chr2:424156 4.87E-16 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g00037 K01800 - csv:101213302 400.208