Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g00077 ATGAAATATATGAAGATCATGGATGAGAATAAAAGAGCTTTCATGGCTGTGATTCTGATTCAGACCATTTACGCCGGCATGTTTCTCCTCTCCAAGGCTGCGTTCGATGGCGGAATGAACAACTATATCTTCGTTTTCTATCGCCAAGCCATCGCCACCGTCTTCCTTTCTCCCATAGCCTTCTTTTTTCAATGGAAAGATGCCCCACCTTTGACATTCTTCACCTTCTGCAAAATTTTTATGCTCTCTTTATTTGGGATAGCCATATGTTTAAATCTTTATGGGATTGCTCTTGTGTACACGTCAGCAACATTGGCTGCAGCAACTACAAATTGTCTTCCTGTCATCACCTTCTTCGTCGCTCTCTTACTTAGGATGGAAGTGTTGAGGATGAAATCAATAGCAGGAATTGCAAAGCTAGCAGGAATAATATTGTGCATTGGTGGTGTTGGAATGTTGGCATTTTACAAAGGCCCTCAATTCAATTTGTTTAATAATCATCATCTCTTTTCTATCCATCACCATTCTTCTAATTCTCTTGCATTGCCCAAATCTTGGTTGAAGGGTTGCTTTTTGATGCTATCTGCCAATACCTTATGGGGTATTTGGATTGTTCTTCAGGCATTTGTATTGAAAAGCTATCCATCAAAGCTTCTGTTGACAAATCTTCAATGTTTATTAAGTTCATTTCAATCATTTGGAATTGCTATTGCAATGGAGAGAGACCCTCAGCAATGGAAACTTGGTTGGAATATTAGGCTTCTTTCAGTTGCATACTGTGGCATCGTGGTAACCGCGGTTACATATTGTCTTCAAGCTTGGGTTATTGAGAAGAAAGGACCAGTTTATTTAGCCATTAGTTTAGGAGGAATGTTGTTGGTGGGAGGGCTTTATTTTGTGCTATGGGGAAAGAGCAAAGAGCAAAAAATAAGTGAAGGATTGAAAGAAGGTAGCAAAGAATGCAACATGCAAGGGAATGAGATCACTAAGTTAGGAAATGAAACTCCAACTTCTTCAGTGGAAAATAAGAAAAGAGGTTTGATGGTAGTGATTCTAATTCAAACCATTAACGCCGGCATGATAGCCATATGTTTAAATTTGTATGGAATTGCTCTTGCGTACACGTCAGCAACATTGGCTGCAGCAACTGCCAACTGTCTTCCCGTCATCACCTTCTTTGTCGCGCTTTTACTTAGGATGGAAGTGTTGAGGATGAAATCAATAGCAGGAATTGCAAAGGTAGCAGGAATAATATTGTGCATTGGTGGTGTTGGAATGTTGGCATTTTACAAAGGCCCTCAATTCAACTTGTTTAACAATCATCATCTCTTATCTATCCATCACCATTCTTCTAATTCTCTTACATTGCCCAAATCTTGGATGAAGGGTTGCCTTTTGATGCTAGCTTCCAATACCTTATGGAGCATTTGGATTGTTCTTCAGTTTAGGAGGAATGTTGTTGGTGGGAGGGCTTTATTTTGTGCTATGGGGAAAGAGCAAAGAGCAAAAAATAAGTGA 1518 39.59 MKYMKIMDENKRAFMAVILIQTIYAGMFLLSKAAFDGGMNNYIFVFYRQAIATVFLSPIAFFFQWKDAPPLTFFTFCKIFMLSLFGIAICLNLYGIALVYTSATLAAATTNCLPVITFFVALLLRMEVLRMKSIAGIAKLAGIILCIGGVGMLAFYKGPQFNLFNNHHLFSIHHHSSNSLALPKSWLKGCFLMLSANTLWGIWIVLQAFVLKSYPSKLLLTNLQCLLSSFQSFGIAIAMERDPQQWKLGWNIRLLSVAYCGIVVTAVTYCLQAWVIEKKGPVYLAISLGGMLLVGGLYFVLWGKSKEQKISEGLKEGSKECNMQGNEITKLGNETPTSSVENKKRGLMVVILIQTINAGMIAICLNLYGIALAYTSATLAAATANCLPVITFFVALLLRMEVLRMKSIAGIAKVAGIILCIGGVGMLAFYKGPQFNLFNNHHLLSIHHHSSNSLTLPKSWMKGCLLMLASNTLWSIWIVLQFRRNVVGGRALFCAMGKEQRAKNK 505
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 769400 787908 - ClCG02G000730.1 Cla02g00077 266203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g00077 505 PANTHER WAT1-RELATED PROTEIN 12 287 IPR030184 GO:0016021|GO:0022857
Cla02g00077 505 PANTHER WAT1-RELATED PROTEIN 347 481 IPR030184 GO:0016021|GO:0022857
Cla02g00077 505 Pfam EamA-like transporter family 15 138 IPR000620 GO:0016020|GO:0016021
Cla02g00077 505 Pfam EamA-like transporter family 188 302 IPR000620 GO:0016020|GO:0016021
Cla02g00077 505 PANTHER WAT1-RELATED PROTEIN 347 481 - -
Cla02g00077 505 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 157 - -
Cla02g00077 505 PANTHER WAT1-RELATED PROTEIN 12 287 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla01g01537 Cla02g00077 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01538 Cla-Chr1:30001320 Cla02g00077 Cla-Chr2:769400 4.65E-24 dispersed
Cla02g00077 Cla-Chr2:769400 Cla08g00712 Cla-Chr8:19390302 1.35E-10 dispersed
Cla01g01537 Cla-Chr1:29966743 Cla02g00077 Cla-Chr2:769400 7.98E-14 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g00077 - - csv:101203024 577.4