Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla02g00079 | ATGGCGAAATCCCCAGAAAATGAACATCCTCACAAGGCTTTTGGTTGGGCTGCTCGAGATTCTTCTGGCTTACTCTCCCCTTTTCATTTCTCTCGAAGGGAAAATGGTGATGATGATGTGTCTATCAAAGTCCTTTACTGTGGGGTCTGCCACTCTGATCTGCACATGCTCAAGAATGACTGGGGTTCTACAGATTATCCTGTAGTACCAGGGCATGAGATTGTTGGTGTTGTGACTTCTGTTGGGAAAAATGTGAAGAAATTCAAAGCAGGAGACGAAGTTGGGGTCGGTGTCATAGTTGGATCTTGTAGAAATTGTGAAAACTGCAAACAAGACTTGGAGAGTTACTGCTCCAAGATGGAATATACTTACAATTCTCCTGGAGTTGATGGAACGAAGAATTACGGTGGTTATTCGGATAAGATCGTTGTCGATCAGCATTTTGTTGTGAGATTTCCTAAAAACTTAGCTCTTGATGCTGGTGCTCCACTCCTATGTGCTGGGATTACAGTTTATAGCCCAATGAGACATTTTGGAATGACTGAACCTGGTAAGCATTTGGGTGTGGCTGGACTTGGTGGGCTTGGTCATGTTGCTGTTAAGTTTGGTAAGGCATTTGGGTTGAAAGTTACTGTCATTAGTACCTCTTCTAGGAAGAAGGAAGAAGCAATCGACAGGCTCGGTGCGGATGCTTTCGTTGTTTCAAGTGATCCCGAACAATTGAAGGCTGCCATGGGAACTATGGATTACATTTTGGACACAATATCTGCTGTTCATCCTCTTGATCCGTTGATTAGTCTGCTAAACCTCAATGGAAAATTAGTCGCTGTTGGTTTACCTAACAAGCCACTTGAACTATCGCTCGGGTGTCTTGTTTCTGGTAGGAGGCTGGTTGCTGGAAGCAACTTTGGAGGACTGAAAGAGACACAAGAGATGTTAGATTTCTGTGGAAAACACAATATTACAGCAGAAATTGAGCTCATTAAGATGGATGCCATTAATTCGGCTATCGAAAGGCTTGGGAAAGCTGATGTTAAATATCGGTTTGTGATCGACATCGGAAACTCTTTCAAATAG | 1077 | 43.08 | MAKSPENEHPHKAFGWAARDSSGLLSPFHFSRRENGDDDVSIKVLYCGVCHSDLHMLKNDWGSTDYPVVPGHEIVGVVTSVGKNVKKFKAGDEVGVGVIVGSCRNCENCKQDLESYCSKMEYTYNSPGVDGTKNYGGYSDKIVVDQHFVVRFPKNLALDAGAPLLCAGITVYSPMRHFGMTEPGKHLGVAGLGGLGHVAVKFGKAFGLKVTVISTSSRKKEEAIDRLGADAFVVSSDPEQLKAAMGTMDYILDTISAVHPLDPLISLLNLNGKLVAVGLPNKPLELSLGCLVSGRRLVAGSNFGGLKETQEMLDFCGKHNITAEIELIKMDAINSAIERLGKADVKYRFVIDIGNSFK | 358 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 827566 | 831443 | + | ClCG02G000750.1 | Cla02g00079 | 266205 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla02g00079 | 358 | PANTHER | ALDEHYDE REDUCTASE | 2 | 357 | - | - | |
Cla02g00079 | 358 | Gene3D | - | 167 | 323 | - | - | |
Cla02g00079 | 358 | SUPERFAMILY | GroES-like | 20 | 185 | IPR011032 | - | |
Cla02g00079 | 358 | ProSitePatterns | Zinc-containing alcohol dehydrogenases signature. | 71 | 85 | IPR002328 | GO:0008270|GO:0016491 | |
Cla02g00079 | 358 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 158 | 321 | IPR036291 | - | |
Cla02g00079 | 358 | CDD | CAD1 | 14 | 352 | - | - | |
Cla02g00079 | 358 | Pfam | Alcohol dehydrogenase GroES-like domain | 38 | 151 | IPR013154 | - | |
Cla02g00079 | 358 | Gene3D | - | 16 | 353 | - | - | |
Cla02g00079 | 358 | SMART | PKS_ER_names_mod | 23 | 351 | IPR020843 | GO:0016491 | |
Cla02g00079 | 358 | PANTHER | LOW QUALITY PROTEIN: 8-HYDROXYGERANIOL DEHYDROGENASE-LIKE | 2 | 357 | - | - | |
Cla02g00079 | 358 | Pfam | Zinc-binding dehydrogenase | 194 | 315 | IPR013149 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g00122 | Cla-Chr1:1137091 | Cla02g00079 | Cla-Chr2:827566 | 1.80E-112 | dispersed | |
Cla01g01784 | Cla-Chr1:32783667 | Cla02g00079 | Cla-Chr2:827566 | 6.78E-171 | dispersed | |
Cla02g00079 | Cla-Chr2:827566 | Cla05g01605 | Cla-Chr5:27322767 | 9.51E-142 | dispersed | |
Cla02g00079 | Cla-Chr2:827566 | Cla02g00080 | Cla-Chr2:841745 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla02g00079 | K00083 | - | csv:101205228 | 671.774 |