Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g00080 ATGGCAAAATCACCCGAAGATGAACACCCAATCAAGGCTTTCGGATGGGCTGCCCGAGATACATCCGGGTTACTCTCCCCCTTCCATTTCTCTAGAAGGGAAAATCGTGATGATGATGTCAGTATCAAAGTCCTTTACTGTGGGGTTTGCCATTCTGATCTACATTTGCTCAAGAATGATTGGGGTGTCACAAATTATCCAATTGTCCCAGGGTATGATTTAAAGAAAAAGAGAAAACAGCATGAGATTGTCGGTGTTGTGACCTCTGTTGGAAAGAATGTGAAGAAATTCAAAGCAGGCGATCAAGTTGGGGTTGGTGTCATAGTTGGATCTTGCAGAAGTTGTGAAAATTGTGAACAAGACTTGGAGAATTACTGCCCCAAGATGACATATACTTACAACTCACATTCATCTGATGGAGAAAAGACTTACGGTGGTTATTCTGATAAGATCGTTGTTGATCAGCATTTCGTTCTCCGATTTCCTGACAACTTACCCCTTGATGCTGGAGCTCCACTTCTTTGCGCTGGAATCACAATTTATAGCCCTATGAAATACTATGGAATGACTGAATCTGGTAAGCATTTGGGTGTGGTTGGTCTTGGTGGGCTTGGTCATGTTGCTGTTAAGTTTGGTAAGGCATTTGGGTTGAAAGTTACTGTCATTAGTACCTCTCCAAGAAAGAAGGAGGAAGCCATTGACAGGCTCGGTGCCGATGCTTTCGTTGTTTCAAGTGATCCCCCACAATTAAAGGCCGCCATGGGGACGATGGATTACATTATCGACACGGTATCCGCTATCCATGCTCTTGCTCCATTGCTTGGTCTGCTAAAACTGAATGGAAAGTTGGTCACTGTGGGTTTACCTAACAAGCCCCTTGAGCTGCCAGTTGCTTCTCTAGTTCTCGGTAGGAGGATGGTTGGTGGAAGCAACTTTGGAGGGCTGAAAGAGACACAAGAGATGTTGGATTTCTGTGCTCAGCACAACATCACAGCAGAGATTGAGCTCATTAAGATGGATGAAATTAACAAGGCCATCGAAAGACTTGCAAAAGCCGATGTTCGATACCGGTTCGTGATAGACATTGCAAACTCCTTGAAATAG 1104 44.2 MAKSPEDEHPIKAFGWAARDTSGLLSPFHFSRRENRDDDVSIKVLYCGVCHSDLHLLKNDWGVTNYPIVPGYDLKKKRKQHEIVGVVTSVGKNVKKFKAGDQVGVGVIVGSCRSCENCEQDLENYCPKMTYTYNSHSSDGEKTYGGYSDKIVVDQHFVLRFPDNLPLDAGAPLLCAGITIYSPMKYYGMTESGKHLGVVGLGGLGHVAVKFGKAFGLKVTVISTSPRKKEEAIDRLGADAFVVSSDPPQLKAAMGTMDYIIDTVSAIHALAPLLGLLKLNGKLVTVGLPNKPLELPVASLVLGRRMVGGSNFGGLKETQEMLDFCAQHNITAEIELIKMDEINKAIERLAKADVRYRFVIDIANSLK 367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 841745 845481 + ClCG02G000760.2 Cla02g00080 266206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g00080 367 SUPERFAMILY GroES-like 9 208 IPR011032 -
Cla02g00080 367 CDD CAD1 14 361 - -
Cla02g00080 367 Gene3D - 16 362 - -
Cla02g00080 367 PANTHER ALDEHYDE REDUCTASE 12 366 - -
Cla02g00080 367 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED 12 366 - -
Cla02g00080 367 Gene3D - 176 332 - -
Cla02g00080 367 SMART PKS_ER_names_mod 23 360 IPR020843 GO:0016491
Cla02g00080 367 Pfam Alcohol dehydrogenase GroES-like domain 38 159 IPR013154 -
Cla02g00080 367 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 165 330 IPR036291 -
Cla02g00080 367 Pfam Zinc-binding dehydrogenase 203 326 IPR013149 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00080 Cla-Chr2:841745 Cla05g01605 Cla-Chr5:27322767 5.14E-141 dispersed
Cla02g00079 Cla-Chr2:827566 Cla02g00080 Cla-Chr2:841745 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g00080 K00083 - csv:101205228 592.808