Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g00092 ATGGACCCAACTTTTGTTAAATCAAAAGACTCTACTTCTTACTGGGTTCTAACCCTTCCTTATTTTCTTGCTTTCGATAACTATGGCCTCTTCCATTGCTTTCTCCTCCTTCTTCTAGCTTTCCTCTCTCTCGCTCTTCTCACTTGGGCTTTCTCCCCCGCCGGCACTGCTTGGAAAAATGGAAGAAACCGTCGGGGTCCACTCCCCATTCCCGGCCCTCGCGGCCTTCCATTTCTCGGCAGTTTATTCACTCTCACCCACGGCTTACCCCATCGGACTCTCGCTGCTATAGCAGCCAGCCGTCGAAACTCTCATCTCATGGCTTTCTCTCTCGGCTCCACTCCTGTTGTGGTTGCTTCCCACCCTAACACCGCTAAGGAAATTCTAACCTCCCCCCACTTCGCGGACCGCCCGCTCAAGCAGTCCGCCAAGAGTTTAATGTTCGGTCGAGCCATAGGGTTCGCACCAAACGGAACCTACTGGCGTCTCTTAAGAAGAATTGCTTCTTCCCACCTCTTCTCTCCCAAGCGTATTACCGCCCACGAAGGCGTGCGGCAGCTCCATTGCGCTGCTCTGCTTCAAAGCATTCGCCTTGAACAAACCCTCCATGGAGCTGTTGGTTTGAGGAGCCATCTTCAAGCTGCTTCGTTGAAGAACGTGATGTGGAGTGTATTTGGGAAGCGGTTCGAGGAAGGGGATTTGGAATTGGAAATGGTTCGAGATTTGGTCCGTGAAGGGTTCGAGCTGTTGGGTGCGTTTAATTGGTCCGATTATCTCCCTTGGCTCACTTGGTTCTATGACCCGTTTCGTATTAACCAACGCTGCGCTCAACTCGTCCCCAAAGTTAATAAATTCGTACGAGGCGTAATTGATGAACACCGCCGTTGTAAAACCCTGTCGGACGATTCTGATTTTGTTGACGTTTTGCTTTCCCTTGATGGCGAAGAAAAACTCAACGAAGATGACATGGTCGCTGTTTTATGGGTAAGTAAAGATAGGGGAACGGATACGACAGCGCTGCTGACAGAGTGGGTGATGGCGGAGTTAGTTTTGCACGGTGAAATACAAGAAGAGGTTGGGAGGGAAATCGAGAGCGTAGTGGGCGGTGACGGAAGGATTCTCACAGACGCTGACGTGGCGAAACTGCCTTACTTACAGGCGGTGGTGAAGGAGACTCTACGGCTACATCCACCGGGCCCACTTCTCTCGTGGGCCCGTCTTTCTTCGTCGGACGTCCAGCTCAGCAACGGCATGCTTATCCCCGAGAACACAACCGCCATGGTCAATATGTGGGCCATCACGCACGATCCCCACGTATGGGAAAATCCACACGTGTTCAACCCCGGCAGGTTTCTGACCGCTGACGTGGACGTCAGAGGCAGCGATCTCCGCCTTGCGCCGTTTGGGGCTGGGCGGAGGGTCTGCCCGGGAAAGAACCTCGGCCTTGTGACGGTCACACTATGGGTGGCTAAGTTGGTCCATCACTTTAAATGGGCCCCCGACCCGGCCCACCCGGTCGACCTTACCGAACTCCTCAAGCTCTCGTCTGAGATGAAAAATCCTCTACGTGCAGTAGCAGCGGAAAGACGTGTTCTTTTCCCCTTTTTAGCTTTGAGTCCAGTAGAGGTGCATGTGAAGTCAATAAACTATTTTAGGTTACAATTCAATGACATTAATGTTAGGTCCACGTAA 1692 52.13 MDPTFVKSKDSTSYWVLTLPYFLAFDNYGLFHCFLLLLLAFLSLALLTWAFSPAGTAWKNGRNRRGPLPIPGPRGLPFLGSLFTLTHGLPHRTLAAIAASRRNSHLMAFSLGSTPVVVASHPNTAKEILTSPHFADRPLKQSAKSLMFGRAIGFAPNGTYWRLLRRIASSHLFSPKRITAHEGVRQLHCAALLQSIRLEQTLHGAVGLRSHLQAASLKNVMWSVFGKRFEEGDLELEMVRDLVREGFELLGAFNWSDYLPWLTWFYDPFRINQRCAQLVPKVNKFVRGVIDEHRRCKTLSDDSDFVDVLLSLDGEEKLNEDDMVAVLWVSKDRGTDTTALLTEWVMAELVLHGEIQEEVGREIESVVGGDGRILTDADVAKLPYLQAVVKETLRLHPPGPLLSWARLSSSDVQLSNGMLIPENTTAMVNMWAITHDPHVWENPHVFNPGRFLTADVDVRGSDLRLAPFGAGRRVCPGKNLGLVTVTLWVAKLVHHFKWAPDPAHPVDLTELLKLSSEMKNPLRAVAAERRVLFPFLALSPVEVHVKSINYFRLQFNDINVRST 563
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1006628 1012019 - ClCG02G000870.2 Cla02g00092 266218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g00092 563 PANTHER CYTOCHROME P450 FAMILY 78 PROTEIN 8 530 - -
Cla02g00092 563 PANTHER CYTOCHROME P450 78A7-RELATED 8 530 - -
Cla02g00092 563 SUPERFAMILY Cytochrome P450 70 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00092 563 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 468 477 IPR017972 GO:0005506|GO:0016705
Cla02g00092 563 PRINTS P450 superfamily signature 466 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00092 563 PRINTS P450 superfamily signature 387 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00092 563 PRINTS P450 superfamily signature 475 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00092 563 PRINTS P450 superfamily signature 333 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00092 563 Gene3D Cytochrome P450 60 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00092 563 Pfam Cytochrome P450 71 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00092 563 PRINTS E-class P450 group I signature 215 233 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00092 563 PRINTS E-class P450 group I signature 475 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00092 563 PRINTS E-class P450 group I signature 465 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00092 563 PRINTS E-class P450 group I signature 386 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00092 563 PRINTS E-class P450 group I signature 342 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00092 563 PRINTS E-class P450 group I signature 429 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g00092 563 PRINTS E-class P450 group I signature 100 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00092 Cla-Chr2:1006628 Cla08g01050 Cla-Chr8:23178388 9.67E-167 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g00092 K20619 - csv:101214099 893.649